RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 IGKV2-24A0A0C4DH68 120 aa13.33□□□□□ -0.28
SEC23A-213ENST00000557280 PRSS2P07478 247 aa13.33□□□□□ -0.28
SEC23A-213ENST00000557280 CIRBPQ14011 172 aaKnown RBP13.33□□□□□ -0.28
SEC23A-213ENST00000557280 CIRBP-AS1Q8TBR5 109 aa13.33□□□□□ -0.28
SEC23A-213ENST00000557280 SPACA4Q8TDM5 124 aa13.33□□□□□ -0.28
SEC23A-213ENST00000557280 F8WDY8 70 aa13.32□□□□□ -0.28
SEC23A-213ENST00000557280 H3BRM9 83 aa13.32□□□□□ -0.28
SEC23A-213ENST00000557280 SMR3BP02814 79 aaPredicted RBP13.32□□□□□ -0.28
SEC23A-213ENST00000557280 TMEM170BQ5T4T1 132 aa13.31□□□□□ -0.28
SEC23A-213ENST00000557280 COX7B2Q8TF08 81 aa13.31□□□□□ -0.28
SEC23A-213ENST00000557280 IGLV5-39A0A0G2JS06 123 aa13.3□□□□□ -0.28
SEC23A-213ENST00000557280 RNF151Q2KHN1 245 aa13.3□□□□□ -0.28
SEC23A-213ENST00000557280 C6orf226Q5I0X4 101 aa13.3□□□□□ -0.28
SEC23A-213ENST00000557280 PMCHL2Q9BQD1 86 aa13.3□□□□□ -0.28
SEC23A-213ENST00000557280 LOC107984640A0A0U1RRK4 108 aa13.29□□□□□ -0.28
SEC23A-213ENST00000557280 CKS1BP61024 79 aa13.29□□□□□ -0.28
SEC23A-213ENST00000557280 C9orf116Q5BN46 136 aaPredicted RBP13.29□□□□□ -0.28
SEC23A-213ENST00000557280 FAT1Q14517 4588 aa13.29□□□□□ -0.28
SEC23A-213ENST00000557280 RPL18AQ02543 176 aaKnown RBP13.28□□□□□ -0.28
SEC23A-213ENST00000557280 MAJINQ3KP22 176 aa13.28□□□□□ -0.28
SEC23A-213ENST00000557280 KRTAP4-5Q9BYR2 181 aa13.28□□□□□ -0.28
SEC23A-213ENST00000557280 TRBV30A0A0K0K1B3 111 aa13.27□□□□□ -0.29
SEC23A-213ENST00000557280 PTTG1IPP53801 180 aa13.27□□□□□ -0.29
SEC23A-213ENST00000557280 GAGE2BQ13066 116 aa13.27□□□□□ -0.29
SEC23A-213ENST00000557280 Q8N1X5 172 aa13.27□□□□□ -0.29
SEC23A-213ENST00000557280 MAP1LC3CQ9BXW4 147 aa13.27□□□□□ -0.29
SEC23A-213ENST00000557280 A0A087WYN8 130 aa13.26□□□□□ -0.29
SEC23A-213ENST00000557280 TMEM223A0PJW6 202 aa13.26□□□□□ -0.29
SEC23A-213ENST00000557280 Q6ZRP5 223 aa13.25□□□□□ -0.29
SEC23A-213ENST00000557280 SYS1-DBNDD2H3BUS1 97 aa13.24□□□□□ -0.29
SEC23A-213ENST00000557280 CXCL5P42830 114 aa13.24□□□□□ -0.29
SEC23A-213ENST00000557280 PKIGQ9Y2B9 76 aa13.24□□□□□ -0.29
SEC23A-213ENST00000557280 TLX1NBP0CAT3 122 aa13.23□□□□□ -0.29
SEC23A-213ENST00000557280 DPH3Q96FX2 82 aa13.23□□□□□ -0.29
SEC23A-213ENST00000557280 STPG4Q8N801 248 aa13.22□□□□□ -0.29
SEC23A-213ENST00000557280 PLAC8Q9NZF1 115 aa13.22□□□□□ -0.29
SEC23A-213ENST00000557280 DPM2O94777 84 aa13.21□□□□□ -0.29
SEC23A-213ENST00000557280 C3orf79P0CE67 100 aa13.21□□□□□ -0.29
SEC23A-213ENST00000557280 PLNP26678 52 aa13.21□□□□□ -0.29
SEC23A-213ENST00000557280 GAGE2EQ4V326 116 aa13.21□□□□□ -0.29
SEC23A-213ENST00000557280 Q5VSD8 79 aa13.21□□□□□ -0.29
SEC23A-213ENST00000557280 LINC00528Q8N1L1 170 aa13.21□□□□□ -0.29
SEC23A-213ENST00000557280 GAGE2DQ9UEU5 116 aa13.21□□□□□ -0.29
SEC23A-213ENST00000557280 NDUFC2-KCTD14E9PQ53 114 aa13.2□□□□□ -0.3
SEC23A-213ENST00000557280 HIST3H2BBQ8N257 126 aa13.2□□□□□ -0.3
SEC23A-213ENST00000557280 IGKCP01834 107 aa13.19□□□□□ -0.3
SEC23A-213ENST00000557280 LINC00474Q9P2X8 69 aa13.19□□□□□ -0.3
SEC23A-213ENST00000557280 A0A1W2PNN7 141 aa13.18□□□□□ -0.3
SEC23A-213ENST00000557280 KRTDAPP60985 99 aa13.18□□□□□ -0.3
SEC23A-213ENST00000557280 LINC01545Q5VT33 79 aa13.18□□□□□ -0.3
SEC23A-213ENST00000557280 ABCA13Q86UQ4 5058 aa13.18□□□□□ -0.3
SEC23A-213ENST00000557280 PET117Q6UWS5 81 aa13.17□□□□□ -0.3
SEC23A-213ENST00000557280 VPS13BQ7Z7G8 4022 aa13.17□□□□□ -0.3
SEC23A-213ENST00000557280 FAM168BA1KXE4 195 aa13.16□□□□□ -0.3
SEC23A-213ENST00000557280 EPM2AB3EWF7 344 aa13.16□□□□□ -0.3
SEC23A-213ENST00000557280 TSPEAR-AS2P59090 65 aa13.16□□□□□ -0.3
SEC23A-213ENST00000557280 C9orf129Q5T035 196 aaKnown RBP13.16□□□□□ -0.3
SEC23A-213ENST00000557280 ZNF625Q96I27 306 aaPredicted RBP13.16□□□□□ -0.3
SEC23A-213ENST00000557280 HIST1H2BLQ99880 126 aa13.15□□□□□ -0.3
SEC23A-213ENST00000557280 S100A6P06703 90 aa13.14□□□□□ -0.31
SEC23A-213ENST00000557280 KRTAP7-1Q8IUC3 87 aa13.13□□□□□ -0.31
SEC23A-213ENST00000557280 XAGE1AQ9HD64 81 aa13.13□□□□□ -0.31
SEC23A-213ENST00000557280 FAM229AH3BQW9 127 aa13.12□□□□□ -0.31
SEC23A-213ENST00000557280 SNRPEP62304 92 aaKnown RBP13.12□□□□□ -0.31
SEC23A-213ENST00000557280 S100A2P29034 98 aa13.11□□□□□ -0.31
SEC23A-213ENST00000557280 PFN2P35080 140 aa13.11□□□□□ -0.31
SEC23A-213ENST00000557280 KRTAP10-4P60372 401 aaPredicted RBP13.11□□□□□ -0.31
SEC23A-213ENST00000557280 LEPROTO15243 131 aa13.1□□□□□ -0.31
SEC23A-213ENST00000557280 FAM19A5Q7Z5A7 132 aaPredicted RBP13.1□□□□□ -0.31
SEC23A-213ENST00000557280 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
SEC23A-213ENST00000557280 C5orf52A6NGY3 159 aa13.09□□□□□ -0.31
SEC23A-213ENST00000557280 HERVK_113P61574 105 aa13.09□□□□□ -0.31
SEC23A-213ENST00000557280 NDUFA12Q9UI09 145 aa13.08□□□□□ -0.32
SEC23A-213ENST00000557280 PCLOQ9Y6V0 5065 aa13.08□□□□□ -0.32
SEC23A-213ENST00000557280 J3QQQ9 107 aa13.07□□□□□ -0.32
SEC23A-213ENST00000557280 SERTAD4-AS1Q5TG53 156 aa13.07□□□□□ -0.32
SEC23A-213ENST00000557280 SFTA2Q6UW10 78 aa13.07□□□□□ -0.32
SEC23A-213ENST00000557280 PHF5AQ7RTV0 110 aaKnown RBP13.07□□□□□ -0.32
SEC23A-213ENST00000557280 PLEKHB2Q96CS7 222 aa13.07□□□□□ -0.32
SEC23A-213ENST00000557280 RPL37AP61513 92 aaKnown RBP13.06□□□□□ -0.32
SEC23A-213ENST00000557280 E9PLD3 99 aa13.05□□□□□ -0.32
SEC23A-213ENST00000557280 PLA2G1BP04054 148 aaKnown RBP13.05□□□□□ -0.32
SEC23A-213ENST00000557280 ATOH7Q8N100 152 aa13.05□□□□□ -0.32
SEC23A-213ENST00000557280 A0A0U1RRA0 63 aa13.04□□□□□ -0.32
SEC23A-213ENST00000557280 C20orf202A1L168 122 aa13.04□□□□□ -0.32
SEC23A-213ENST00000557280 LGALS3P17931 250 aaKnown RBP13.03□□□□□ -0.32
SEC23A-213ENST00000557280 C7orf33Q8WU49 177 aa13.03□□□□□ -0.32
SEC23A-213ENST00000557280 IGKV2D-26A0A0A0MRZ7 120 aa13.02□□□□□ -0.33
SEC23A-213ENST00000557280 MYMXA0A1B0GTQ4 84 aa13.02□□□□□ -0.33
SEC23A-213ENST00000557280 M0QXV9 152 aa13.02□□□□□ -0.33
SEC23A-213ENST00000557280 SMIM13P0DJ93 91 aa13.02□□□□□ -0.33
SEC23A-213ENST00000557280 COX17Q14061 63 aa13.02□□□□□ -0.33
SEC23A-213ENST00000557280 KRTAP11-1Q8IUC1 163 aa13.02□□□□□ -0.33
SEC23A-213ENST00000557280 SND1-IT1Q9HBX3 110 aa13.02□□□□□ -0.33
SEC23A-213ENST00000557280 LINC00158P58513 81 aa13.01□□□□□ -0.33
SEC23A-213ENST00000557280 HERV-K104P63124 156 aa13.01□□□□□ -0.33
SEC23A-213ENST00000557280 HNRNPA3P51991 378 aaKnown RBP13□□□□□ -0.33
SEC23A-213ENST00000557280 MEIG1Q5JSS6 88 aa13□□□□□ -0.33
SEC23A-213ENST00000557280 SRRM2Q9UQ35 2752 aaKnown RBP13□□□□□ -0.33
SEC23A-213ENST00000557280 PRR3P79522 188 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms