RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ZNF503-AS2A6NEH8 195 aa6.51□□□□□ -1.37
SYNE3-205ENST00000557275 IGFL2Q6UWQ7 119 aa6.51□□□□□ -1.37
SYNE3-205ENST00000557275 TSHBP01222 138 aa6.51□□□□□ -1.37
SYNE3-205ENST00000557275 C7orf65Q6ZTY9 151 aa6.5□□□□□ -1.37
SYNE3-205ENST00000557275 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
SYNE3-205ENST00000557275 DEFB4AO15263 64 aa6.5□□□□□ -1.37
SYNE3-205ENST00000557275 CYP4F30PQ9H0H9 118 aa6.5□□□□□ -1.37
SYNE3-205ENST00000557275 CIRBP-AS1Q8TBR5 109 aa6.5□□□□□ -1.37
SYNE3-205ENST00000557275 KPRPQ5T749 579 aaPredicted RBP6.5□□□□□ -1.37
SYNE3-205ENST00000557275 BEAN1Q3B7T3 259 aa6.5□□□□□ -1.37
SYNE3-205ENST00000557275 ATP11AUNQ6ZP68 121 aa6.49□□□□□ -1.37
SYNE3-205ENST00000557275 C11orf1Q9H5F2 150 aa6.49□□□□□ -1.37
SYNE3-205ENST00000557275 KLLNB2CW77 178 aa6.49□□□□□ -1.37
SYNE3-205ENST00000557275 NHLRC4P0CG21 123 aaPredicted RBP6.49□□□□□ -1.37
SYNE3-205ENST00000557275 MGAM2Q2M2H8 2515 aa6.49□□□□□ -1.37
SYNE3-205ENST00000557275 IGLV2-14P01704 120 aa6.49□□□□□ -1.37
SYNE3-205ENST00000557275 IGLV2-8P01709 118 aa6.49□□□□□ -1.37
SYNE3-205ENST00000557275 RITA1Q96K30 269 aa6.49□□□□□ -1.37
SYNE3-205ENST00000557275 MAPKAPK5-AS1Q8N8E1 139 aa6.48□□□□□ -1.37
SYNE3-205ENST00000557275 C6orf48Q9UBA6 75 aa6.48□□□□□ -1.37
SYNE3-205ENST00000557275 PPDPFQ9H3Y8 114 aa6.48□□□□□ -1.37
SYNE3-205ENST00000557275 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.48□□□□□ -1.37
SYNE3-205ENST00000557275 C2orf48Q96LS8 159 aa6.48□□□□□ -1.37
SYNE3-205ENST00000557275 CYSRT1A8MQ03 144 aa6.47□□□□□ -1.37
SYNE3-205ENST00000557275 Q9BRP9 147 aa6.47□□□□□ -1.37
SYNE3-205ENST00000557275 POLR2KP53803 58 aaKnown RBP6.47□□□□□ -1.37
SYNE3-205ENST00000557275 RNASE3P12724 160 aaKnown RBP6.47□□□□□ -1.37
SYNE3-205ENST00000557275 OXLD1Q5BKU9 147 aa6.47□□□□□ -1.37
SYNE3-205ENST00000557275 PIP4P1Q86T03 277 aa6.46□□□□□ -1.37
SYNE3-205ENST00000557275 CDC42SE2Q9NRR3 84 aa6.46□□□□□ -1.37
SYNE3-205ENST00000557275 SPINK1P00995 79 aa6.46□□□□□ -1.38
SYNE3-205ENST00000557275 PLA2G5P39877 138 aa6.46□□□□□ -1.38
SYNE3-205ENST00000557275 A0A1B0GUV1 79 aa6.46□□□□□ -1.38
SYNE3-205ENST00000557275 GDF5OSQ5U4N7 250 aa6.46□□□□□ -1.38
SYNE3-205ENST00000557275 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
SYNE3-205ENST00000557275 CRIPTQ9P021 101 aa6.45□□□□□ -1.38
SYNE3-205ENST00000557275 TP53TG3Q9ULZ0 132 aa6.45□□□□□ -1.38
SYNE3-205ENST00000557275 PLA2G1BP04054 148 aaKnown RBP6.45□□□□□ -1.38
SYNE3-205ENST00000557275 PRLHP81277 87 aa6.44□□□□□ -1.38
SYNE3-205ENST00000557275 Q6YL49 198 aa6.44□□□□□ -1.38
SYNE3-205ENST00000557275 POM121L12Q8N7R1 296 aa6.44□□□□□ -1.38
SYNE3-205ENST00000557275 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
SYNE3-205ENST00000557275 Q8N7P7 452 aa6.44□□□□□ -1.38
SYNE3-205ENST00000557275 SBSPONQ8IVN8 264 aa6.44□□□□□ -1.38
SYNE3-205ENST00000557275 CD164Q04900 197 aa6.43□□□□□ -1.38
SYNE3-205ENST00000557275 ERC2-IT1O76042 136 aa6.43□□□□□ -1.38
SYNE3-205ENST00000557275 IGIPA6NJ69 53 aa6.43□□□□□ -1.38
SYNE3-205ENST00000557275 NBEAL1Q6ZS30 2694 aa6.43□□□□□ -1.38
SYNE3-205ENST00000557275 MSMPQ1L6U9 139 aa6.43□□□□□ -1.38
SYNE3-205ENST00000557275 LINC00337Q8N6G1 96 aa6.43□□□□□ -1.38
SYNE3-205ENST00000557275 A0A087WSZ3 146 aa6.42□□□□□ -1.38
SYNE3-205ENST00000557275 IGLV2-11P01706 119 aa6.42□□□□□ -1.38
SYNE3-205ENST00000557275 SMIM1B2RUZ4 78 aa6.42□□□□□ -1.38
SYNE3-205ENST00000557275 UQCR11O14957 56 aa6.42□□□□□ -1.38
SYNE3-205ENST00000557275 ZFP36P26651 326 aaKnown RBP6.41□□□□□ -1.38
SYNE3-205ENST00000557275 PLA2G2EQ9NZK7 142 aa6.41□□□□□ -1.38
SYNE3-205ENST00000557275 COL27A1Q8IZC6 1860 aaPredicted RBP6.41□□□□□ -1.38
SYNE3-205ENST00000557275 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
SYNE3-205ENST00000557275 PSMG3-AS1Q96PY0 264 aa6.4□□□□□ -1.38
SYNE3-205ENST00000557275 U3KQA8 63 aa6.4□□□□□ -1.38
SYNE3-205ENST00000557275 LINC00482Q8N8I6 264 aa6.4□□□□□ -1.38
SYNE3-205ENST00000557275 BBC3Q96PG8 261 aaPredicted RBP6.4□□□□□ -1.38
SYNE3-205ENST00000557275 COL4A6Q14031 1691 aa6.4□□□□□ -1.38
SYNE3-205ENST00000557275 IGKV2D-30A0A075B6S6 120 aa6.4□□□□□ -1.39
SYNE3-205ENST00000557275 LOC101927531A0A1B0GV80 90 aa6.4□□□□□ -1.39
SYNE3-205ENST00000557275 IGKV2-30P06310 120 aa6.4□□□□□ -1.39
SYNE3-205ENST00000557275 IGLV5-52A0A0A0MRZ9 124 aa6.4□□□□□ -1.39
SYNE3-205ENST00000557275 A0A087WVE0 104 aa6.39□□□□□ -1.39
SYNE3-205ENST00000557275 A0A087WYN8 130 aa6.39□□□□□ -1.39
SYNE3-205ENST00000557275 Q6ZS46 218 aa6.39□□□□□ -1.39
SYNE3-205ENST00000557275 FRMD6-AS1P0C7T7 363 aa6.39□□□□□ -1.39
SYNE3-205ENST00000557275 LINC00242Q5T6M2 205 aa6.39□□□□□ -1.39
SYNE3-205ENST00000557275 ELOF1P60002 83 aaKnown RBP6.39□□□□□ -1.39
SYNE3-205ENST00000557275 MOBPQ13875 183 aa6.39□□□□□ -1.39
SYNE3-205ENST00000557275 AMELXQ99217 191 aa6.39□□□□□ -1.39
SYNE3-205ENST00000557275 PCSK5Q92824 1860 aa6.38□□□□□ -1.39
SYNE3-205ENST00000557275 C11orf71Q6IPW1 123 aa6.38□□□□□ -1.39
SYNE3-205ENST00000557275 CRIP1P50238 77 aa6.38□□□□□ -1.39
SYNE3-205ENST00000557275 COL4A4P53420 1690 aaPredicted RBP6.38□□□□□ -1.39
SYNE3-205ENST00000557275 SSBP3-AS1Q7Z2R9 100 aa6.38□□□□□ -1.39
SYNE3-205ENST00000557275 EP400Q96L91 3159 aa6.37□□□□□ -1.39
SYNE3-205ENST00000557275 NOTCH1P46531 2555 aa6.37□□□□□ -1.39
SYNE3-205ENST00000557275 HELZ2Q9BYK8 2649 aaKnown RBP6.37□□□□□ -1.39
SYNE3-205ENST00000557275 GOLGB1Q14789 3259 aaKnown RBP6.37□□□□□ -1.39
SYNE3-205ENST00000557275 C11orf72Q8NBR9 251 aa6.36□□□□□ -1.39
SYNE3-205ENST00000557275 BAHCC1Q9P281 2608 aa6.36□□□□□ -1.39
SYNE3-205ENST00000557275 LOC110117498A0A087WWA1 95 aa6.36□□□□□ -1.39
SYNE3-205ENST00000557275 LINC00846Q9NV44 126 aa6.36□□□□□ -1.39
SYNE3-205ENST00000557275 DEFB1P60022 68 aa6.35□□□□□ -1.39
SYNE3-205ENST00000557275 ADORA2A-AS1P86434 159 aa6.35□□□□□ -1.39
SYNE3-205ENST00000557275 UNQ6190/PRO20217Q6UXQ8 127 aa6.35□□□□□ -1.39
SYNE3-205ENST00000557275 COX8CQ7Z4L0 72 aa6.35□□□□□ -1.39
SYNE3-205ENST00000557275 KTN1-AS1Q86SY8 53 aa6.34□□□□□ -1.39
SYNE3-205ENST00000557275 LMO4P61968 165 aa6.34□□□□□ -1.39
SYNE3-205ENST00000557275 GRNP28799 593 aaKnown RBP6.34□□□□□ -1.39
SYNE3-205ENST00000557275 ZNF580Q9UK33 172 aa6.34□□□□□ -1.39
SYNE3-205ENST00000557275 SPRNQ5BIV9 151 aa6.34□□□□□ -1.39
SYNE3-205ENST00000557275 SMIM29Q86T20 159 aa6.34□□□□□ -1.39
SYNE3-205ENST00000557275 LINC01556Q5JQF7 62 aa6.33□□□□□ -1.4
SYNE3-205ENST00000557275 FAM229AH3BQW9 127 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms