RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 C9orf62Q8N4C0 152 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 DIRC1Q969H9 104 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 BORCS7Q96B45 105 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 VCX2Q9H322 139 aa2.85□□□□□ -1.95
HIF1A-209ENST00000556827 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.84□□□□□ -1.95
HIF1A-209ENST00000556827 TRAV1-1A0A0B4J248 108 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 LINC00959A0A1B0GUT2 108 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 IGKV2-29A2NJV5 120 aaPredicted RBP2.84□□□□□ -1.95
HIF1A-209ENST00000556827 SDHAF1A6NFY7 115 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 COX7A2LO14548 114 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 APOMO95445 188 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 TLX1NBP0CAT3 122 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 UBE2D1P51668 147 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 CCL20P78556 96 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 RPL18AQ02543 176 aaKnown RBP2.84□□□□□ -1.95
HIF1A-209ENST00000556827 C1orf137Q5JT78 98 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 MRAP2Q96G30 205 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 CAMK2N2Q96S95 79 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 ST20Q9HBF5 79 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 MED9Q9NWA0 146 aa2.84□□□□□ -1.95
HIF1A-209ENST00000556827 FAT1Q14517 4588 aa2.84□□□□□ -1.96
HIF1A-209ENST00000556827 C19orf71A6NCJ1 209 aa2.83□□□□□ -1.96
HIF1A-209ENST00000556827 FCER1GP30273 86 aa2.83□□□□□ -1.96
HIF1A-209ENST00000556827 TAGLN2P37802 199 aaKnown RBP2.83□□□□□ -1.96
HIF1A-209ENST00000556827 UBE2AP49459 152 aa2.83□□□□□ -1.96
HIF1A-209ENST00000556827 MEF2BQ02080 365 aaPredicted RBP2.83□□□□□ -1.96
HIF1A-209ENST00000556827 ZNF345Q14585 488 aa2.83□□□□□ -1.96
HIF1A-209ENST00000556827 GATD1Q8NB37 220 aa2.83□□□□□ -1.96
HIF1A-209ENST00000556827 LINC00526Q96FQ7 95 aa2.83□□□□□ -1.96
HIF1A-209ENST00000556827 RPP21Q9H633 154 aaKnown RBP2.83□□□□□ -1.96
HIF1A-209ENST00000556827 VPS13BQ7Z7G8 4022 aa2.83□□□□□ -1.96
HIF1A-209ENST00000556827 C7orf77A4D0Y5 90 aa2.82□□□□□ -1.96
HIF1A-209ENST00000556827 RAB19A4D1S5 217 aa2.82□□□□□ -1.96
HIF1A-209ENST00000556827 A8MWL6 223 aa2.82□□□□□ -1.96
HIF1A-209ENST00000556827 PPP1R17O96001 155 aa2.82□□□□□ -1.96
HIF1A-209ENST00000556827 MOBPQ13875 183 aa2.82□□□□□ -1.96
HIF1A-209ENST00000556827 COA6Q5JTJ3 125 aaKnown RBP2.82□□□□□ -1.96
HIF1A-209ENST00000556827 MRPL52Q86TS9 123 aaKnown RBP2.82□□□□□ -1.96
HIF1A-209ENST00000556827 RPL39LQ96EH5 51 aaKnown RBP2.82□□□□□ -1.96
HIF1A-209ENST00000556827 IMMP2LQ96T52 175 aa2.82□□□□□ -1.96
HIF1A-209ENST00000556827 IGLV1-50A0A075B6I6 118 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 TRAV13-1A0A0B4J241 112 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 TRBV6-5A0A0K0K1A5 114 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 HMSDA8MTL9 139 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 GATCO43716 136 aaKnown RBP2.81□□□□□ -1.96
HIF1A-209ENST00000556827 BCL2P10415 239 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 ESDP10768 282 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 SEC61GP60059 68 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 UBE2BP63146 152 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 TMEM241Q24JQ0 296 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 RGS21Q2M5E4 152 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 C9orf116Q5BN46 136 aaPredicted RBP2.81□□□□□ -1.96
HIF1A-209ENST00000556827 OR10D4PQ8NGN7 298 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 CNFNQ9BYD5 112 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 BATF3Q9NR55 127 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 CDC42SE2Q9NRR3 84 aa2.81□□□□□ -1.96
HIF1A-209ENST00000556827 A0A1W2PNN7 141 aa2.8□□□□□ -1.96
HIF1A-209ENST00000556827 NDUFA1O15239 70 aa2.8□□□□□ -1.96
HIF1A-209ENST00000556827 TCAPO15273 167 aa2.8□□□□□ -1.96
HIF1A-209ENST00000556827 IGLV7-43P04211 117 aa2.8□□□□□ -1.96
HIF1A-209ENST00000556827 SPAG11BQ08648 103 aa2.8□□□□□ -1.96
HIF1A-209ENST00000556827 C5orf38Q86SI9 138 aa2.8□□□□□ -1.96
HIF1A-209ENST00000556827 NUP35Q8NFH5 326 aa2.8□□□□□ -1.96
HIF1A-209ENST00000556827 RNASE7Q9H1E1 156 aaKnown RBP2.8□□□□□ -1.96
HIF1A-209ENST00000556827 TMEM242Q9NWH2 141 aa2.8□□□□□ -1.96
HIF1A-209ENST00000556827 CSDC2Q9Y534 153 aaKnown RBP2.8□□□□□ -1.96
HIF1A-209ENST00000556827 UBR4Q5T4S7 5183 aa2.79□□□□□ -1.96
HIF1A-209ENST00000556827 TRBV20OR9-2A0A075B6H5 130 aa2.79□□□□□ -1.96
HIF1A-209ENST00000556827 TRBV27A0A0K0K1C4 114 aa2.79□□□□□ -1.96
HIF1A-209ENST00000556827 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
HIF1A-209ENST00000556827 A0A1B0GUT8 65 aa2.79□□□□□ -1.96
HIF1A-209ENST00000556827 G3V3Q6 166 aa2.79□□□□□ -1.96
HIF1A-209ENST00000556827 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.79□□□□□ -1.96
HIF1A-209ENST00000556827 SMLR1H3BR10 107 aa2.79□□□□□ -1.96
HIF1A-209ENST00000556827 PPP1R2P9O14990 202 aa2.79□□□□□ -1.96
HIF1A-209ENST00000556827 CEBPGP53567 150 aa2.79□□□□□ -1.96
HIF1A-209ENST00000556827 FOXA3P55318 350 aaPredicted RBP2.79□□□□□ -1.96
HIF1A-209ENST00000556827 PHF5AQ7RTV0 110 aaKnown RBP2.79□□□□□ -1.96
HIF1A-209ENST00000556827 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
HIF1A-209ENST00000556827 TMEM191AQ9H0A3 160 aa2.79□□□□□ -1.96
HIF1A-209ENST00000556827 TGIF2-C20orf24A0A0A6YYL0 155 aa2.78□□□□□ -1.96
HIF1A-209ENST00000556827 POLR2KP53803 58 aaKnown RBP2.78□□□□□ -1.96
HIF1A-209ENST00000556827 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
HIF1A-209ENST00000556827 FAM231DQ6ZW35 169 aa2.78□□□□□ -1.96
HIF1A-209ENST00000556827 ORAOV1Q8WV07 137 aa2.78□□□□□ -1.96
HIF1A-209ENST00000556827 PACRGQ96M98 296 aaPredicted RBP2.78□□□□□ -1.96
HIF1A-209ENST00000556827 TIMM21Q9BVV7 248 aa2.78□□□□□ -1.96
HIF1A-209ENST00000556827 MRPL35Q9NZE8 188 aaKnown RBP2.78□□□□□ -1.96
HIF1A-209ENST00000556827 CARHSP1Q9Y2V2 147 aaKnown RBP2.78□□□□□ -1.96
HIF1A-209ENST00000556827 PCP4L1A6NKN8 68 aa2.77□□□□□ -1.97
HIF1A-209ENST00000556827 HIGD1CA8MV81 97 aa2.77□□□□□ -1.97
HIF1A-209ENST00000556827 TMEM250H0YL14 139 aa2.77□□□□□ -1.97
HIF1A-209ENST00000556827 K7EN84 100 aa2.77□□□□□ -1.97
HIF1A-209ENST00000556827 M0QXV9 152 aa2.77□□□□□ -1.97
HIF1A-209ENST00000556827 HBBP68871 147 aa2.77□□□□□ -1.97
HIF1A-209ENST00000556827 RNASE13Q5GAN3 156 aaKnown RBP2.77□□□□□ -1.97
HIF1A-209ENST00000556827 AMN1Q8IY45 258 aa2.77□□□□□ -1.97
HIF1A-209ENST00000556827 SPANXA1Q9NS26 97 aa2.77□□□□□ -1.97
HIF1A-209ENST00000556827 UBE2D4Q9Y2X8 147 aa2.77□□□□□ -1.97
HIF1A-209ENST00000556827 A0A1B0GW15 77 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms