RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 SMDT1Q9H4I9 107 aa5.29□□□□□ -1.56
GTF2A1-204ENST00000556268 C6orf48Q9UBA6 75 aa5.29□□□□□ -1.56
GTF2A1-204ENST00000556268 FAT4Q6V0I7 4981 aa5.28□□□□□ -1.56
GTF2A1-204ENST00000556268 A0A0U1RQV1 116 aa5.28□□□□□ -1.56
GTF2A1-204ENST00000556268 LINC00862A6NCI5 91 aa5.28□□□□□ -1.56
GTF2A1-204ENST00000556268 PPP1R2P9O14990 202 aa5.28□□□□□ -1.56
GTF2A1-204ENST00000556268 RIGQ13278 110 aa5.28□□□□□ -1.56
GTF2A1-204ENST00000556268 MRPL51Q4U2R6 128 aaKnown RBP5.28□□□□□ -1.56
GTF2A1-204ENST00000556268 ZC2HC1BQ5TFG8 222 aa5.28□□□□□ -1.56
GTF2A1-204ENST00000556268 V9GYV3 84 aa5.28□□□□□ -1.56
GTF2A1-204ENST00000556268 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
GTF2A1-204ENST00000556268 TCAPO15273 167 aa5.27□□□□□ -1.57
GTF2A1-204ENST00000556268 ZNF861PO60384 105 aa5.27□□□□□ -1.57
GTF2A1-204ENST00000556268 RPL39P62891 51 aaKnown RBP5.27□□□□□ -1.57
GTF2A1-204ENST00000556268 GAGE2EQ4V326 116 aa5.27□□□□□ -1.57
GTF2A1-204ENST00000556268 TCTE3Q8IZS6 198 aa5.27□□□□□ -1.57
GTF2A1-204ENST00000556268 SPANXA1Q9NS26 97 aa5.27□□□□□ -1.57
GTF2A1-204ENST00000556268 GAGE2DQ9UEU5 116 aa5.27□□□□□ -1.57
GTF2A1-204ENST00000556268 UBE2V1Q13404 147 aa5.26□□□□□ -1.57
GTF2A1-204ENST00000556268 C9orf129Q5T035 196 aaKnown RBP5.26□□□□□ -1.57
GTF2A1-204ENST00000556268 FAM19A5Q7Z5A7 132 aaPredicted RBP5.26□□□□□ -1.57
GTF2A1-204ENST00000556268 TRBV30A0A0K0K1B3 111 aa5.25□□□□□ -1.57
GTF2A1-204ENST00000556268 NDUFC2-KCTD14E9PQ53 114 aa5.25□□□□□ -1.57
GTF2A1-204ENST00000556268 UBE2D1P51668 147 aa5.25□□□□□ -1.57
GTF2A1-204ENST00000556268 LINC01561Q8N1V8 128 aa5.25□□□□□ -1.57
GTF2A1-204ENST00000556268 SMIM7Q9BQ49 75 aa5.25□□□□□ -1.57
GTF2A1-204ENST00000556268 ZNF727A8MUV8 499 aa5.24□□□□□ -1.57
GTF2A1-204ENST00000556268 M0QXV9 152 aa5.24□□□□□ -1.57
GTF2A1-204ENST00000556268 UBE2BP63146 152 aa5.24□□□□□ -1.57
GTF2A1-204ENST00000556268 HBBP68871 147 aa5.24□□□□□ -1.57
GTF2A1-204ENST00000556268 FAM74A3Q4VXF1 159 aa5.24□□□□□ -1.57
GTF2A1-204ENST00000556268 LINC00242Q5T6M2 205 aa5.24□□□□□ -1.57
GTF2A1-204ENST00000556268 NAT8BQ9UHF3 227 aa5.24□□□□□ -1.57
GTF2A1-204ENST00000556268 PYGO1Q9Y3Y4 419 aa5.24□□□□□ -1.57
GTF2A1-204ENST00000556268 A0A1B0GW15 77 aa5.23□□□□□ -1.57
GTF2A1-204ENST00000556268 SMIM27A0A1W2PRY6 76 aa5.23□□□□□ -1.57
GTF2A1-204ENST00000556268 SRP19P09132 144 aaKnown RBP5.23□□□□□ -1.57
GTF2A1-204ENST00000556268 CKS2P33552 79 aa5.23□□□□□ -1.57
GTF2A1-204ENST00000556268 CEBPGP53567 150 aa5.23□□□□□ -1.57
GTF2A1-204ENST00000556268 KIAA1644Q3SXP7 199 aa5.23□□□□□ -1.57
GTF2A1-204ENST00000556268 C2orf82Q6UX34 121 aa5.23□□□□□ -1.57
GTF2A1-204ENST00000556268 SMIM2Q9BVW6 85 aa5.23□□□□□ -1.57
GTF2A1-204ENST00000556268 C22orf24Q9Y442 160 aa5.23□□□□□ -1.57
GTF2A1-204ENST00000556268 A0A087X002 238 aa5.22□□□□□ -1.57
GTF2A1-204ENST00000556268 NUPR1O60356 82 aa5.22□□□□□ -1.57
GTF2A1-204ENST00000556268 TSPAN13O95857 204 aa5.22□□□□□ -1.57
GTF2A1-204ENST00000556268 TGIF2-C20orf24A0A0A6YYL0 155 aa5.21□□□□□ -1.58
GTF2A1-204ENST00000556268 PPBPP02775 128 aa5.21□□□□□ -1.58
GTF2A1-204ENST00000556268 RPL23P62829 140 aaKnown RBP5.21□□□□□ -1.58
GTF2A1-204ENST00000556268 LBHQ53QV2 105 aaPredicted RBP5.21□□□□□ -1.58
GTF2A1-204ENST00000556268 ALKAL2Q6UX46 152 aa5.21□□□□□ -1.58
GTF2A1-204ENST00000556268 EIF5A2Q9GZV4 153 aaKnown RBP5.21□□□□□ -1.58
GTF2A1-204ENST00000556268 IGLV4-3A0A075B6K6 122 aa5.2□□□□□ -1.58
GTF2A1-204ENST00000556268 D6R8Y8 96 aa5.2□□□□□ -1.58
GTF2A1-204ENST00000556268 NPYP01303 97 aa5.2□□□□□ -1.58
GTF2A1-204ENST00000556268 PACRGQ96M98 296 aaPredicted RBP5.2□□□□□ -1.58
GTF2A1-204ENST00000556268 TP73-AS1Q9UF72 201 aa5.2□□□□□ -1.58
GTF2A1-204ENST00000556268 A0A1B0GXF2 115 aa5.19□□□□□ -1.58
GTF2A1-204ENST00000556268 BCE1O60756 84 aa5.19□□□□□ -1.58
GTF2A1-204ENST00000556268 CRYGAP11844 174 aa5.19□□□□□ -1.58
GTF2A1-204ENST00000556268 GAGE2AQ6NT46 116 aa5.19□□□□□ -1.58
GTF2A1-204ENST00000556268 FAM19A3Q7Z5A8 133 aa5.19□□□□□ -1.58
GTF2A1-204ENST00000556268 TMEM141Q96I45 108 aa5.19□□□□□ -1.58
GTF2A1-204ENST00000556268 AMELXQ99217 191 aa5.19□□□□□ -1.58
GTF2A1-204ENST00000556268 C9JQL5 133 aa5.18□□□□□ -1.58
GTF2A1-204ENST00000556268 F8W036 122 aa5.18□□□□□ -1.58
GTF2A1-204ENST00000556268 IFI27P40305 119 aaPredicted RBP5.18□□□□□ -1.58
GTF2A1-204ENST00000556268 RPL28P46779 137 aaKnown RBP5.18□□□□□ -1.58
GTF2A1-204ENST00000556268 CTAG1AP78358 180 aa5.18□□□□□ -1.58
GTF2A1-204ENST00000556268 C2orf66Q6UXQ4 117 aa5.18□□□□□ -1.58
GTF2A1-204ENST00000556268 Q6ZN92 141 aa5.18□□□□□ -1.58
GTF2A1-204ENST00000556268 TYMSOSQ8TAI1 123 aa5.18□□□□□ -1.58
GTF2A1-204ENST00000556268 S100A8P05109 93 aa5.17□□□□□ -1.58
GTF2A1-204ENST00000556268 RAB5AP20339 215 aa5.17□□□□□ -1.58
GTF2A1-204ENST00000556268 KRTAP13-2Q52LG2 175 aa5.17□□□□□ -1.58
GTF2A1-204ENST00000556268 C6orf226Q5I0X4 101 aa5.17□□□□□ -1.58
GTF2A1-204ENST00000556268 TMEM136Q6ZRR5 245 aa5.17□□□□□ -1.58
GTF2A1-204ENST00000556268 LINC00173Q6ZV60 143 aa5.17□□□□□ -1.58
GTF2A1-204ENST00000556268 KRTAP13-1Q8IUC0 172 aa5.17□□□□□ -1.58
GTF2A1-204ENST00000556268 Q8IZM0 81 aa5.17□□□□□ -1.58
GTF2A1-204ENST00000556268 LINC00469Q8N7U9 141 aa5.17□□□□□ -1.58
GTF2A1-204ENST00000556268 XAGE1AQ9HD64 81 aa5.17□□□□□ -1.58
GTF2A1-204ENST00000556268 IGIPA6NJ69 53 aa5.16□□□□□ -1.58
GTF2A1-204ENST00000556268 CKS1BP61024 79 aa5.16□□□□□ -1.58
GTF2A1-204ENST00000556268 MRPL54Q6P161 138 aaKnown RBP5.16□□□□□ -1.58
GTF2A1-204ENST00000556268 TEX43Q6ZNM6 134 aa5.16□□□□□ -1.58
GTF2A1-204ENST00000556268 MRPL55Q7Z7F7 128 aaKnown RBP5.16□□□□□ -1.58
GTF2A1-204ENST00000556268 ORMDL3Q8N138 153 aa5.16□□□□□ -1.58
GTF2A1-204ENST00000556268 LINC00167Q96N53 147 aa5.16□□□□□ -1.58
GTF2A1-204ENST00000556268 ANAPC11Q9NYG5 84 aa5.16□□□□□ -1.58
GTF2A1-204ENST00000556268 NAT8Q9UHE5 227 aa5.16□□□□□ -1.58
GTF2A1-204ENST00000556268 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.59
GTF2A1-204ENST00000556268 ADIRFQ15847 76 aa5.15□□□□□ -1.59
GTF2A1-204ENST00000556268 TPRXLQ17RH7 258 aa5.15□□□□□ -1.59
GTF2A1-204ENST00000556268 FAM229BQ4G0N7 80 aa5.15□□□□□ -1.59
GTF2A1-204ENST00000556268 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
GTF2A1-204ENST00000556268 PRELID3AQ96N28 172 aa5.15□□□□□ -1.59
GTF2A1-204ENST00000556268 ALKBH7Q9BT30 221 aaPredicted RBP5.15□□□□□ -1.59
GTF2A1-204ENST00000556268 VCX2Q9H322 139 aa5.15□□□□□ -1.59
GTF2A1-204ENST00000556268 F8VRH5 84 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms