RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 HRCT1Q6UXD1 115 aa10.56□□□□□ -0.72
NEK9-209ENST00000556170 CSMD2Q7Z408 3487 aa10.56□□□□□ -0.72
NEK9-209ENST00000556170 DEFB121Q5J5C9 76 aa10.56□□□□□ -0.72
NEK9-209ENST00000556170 FHL3Q13643 280 aa10.55□□□□□ -0.72
NEK9-209ENST00000556170 H3BT86 120 aa10.55□□□□□ -0.72
NEK9-209ENST00000556170 ACYP1P07311 99 aa10.54□□□□□ -0.72
NEK9-209ENST00000556170 SPART-AS1P0CW21 52 aa10.54□□□□□ -0.72
NEK9-209ENST00000556170 KRTAP1-3Q8IUG1 177 aa10.54□□□□□ -0.72
NEK9-209ENST00000556170 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.54□□□□□ -0.72
NEK9-209ENST00000556170 COX7A2LO14548 114 aa10.54□□□□□ -0.72
NEK9-209ENST00000556170 MRAPQ8TCY5 172 aa10.54□□□□□ -0.72
NEK9-209ENST00000556170 TRBV30A0A0K0K1B3 111 aa10.53□□□□□ -0.72
NEK9-209ENST00000556170 SPANXDQ9BXN6 97 aa10.53□□□□□ -0.72
NEK9-209ENST00000556170 FHL2Q14192 279 aa10.53□□□□□ -0.72
NEK9-209ENST00000556170 CR1P17927 2039 aa10.53□□□□□ -0.72
NEK9-209ENST00000556170 LINC00643Q86TS7 51 aa10.53□□□□□ -0.72
NEK9-209ENST00000556170 SPANXCQ9NY87 97 aa10.53□□□□□ -0.72
NEK9-209ENST00000556170 Q6Q795 121 aa10.52□□□□□ -0.72
NEK9-209ENST00000556170 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
NEK9-209ENST00000556170 LECT2O14960 151 aa10.51□□□□□ -0.73
NEK9-209ENST00000556170 EIF4EBP3O60516 100 aaPredicted RBP10.51□□□□□ -0.73
NEK9-209ENST00000556170 DSCR8Q96T75 97 aa10.51□□□□□ -0.73
NEK9-209ENST00000556170 NIPBLQ6KC79 2804 aaeCLIP10.5□□□□□ -0.73
NEK9-209ENST00000556170 LINC00959A0A1B0GUT2 108 aa10.5□□□□□ -0.73
NEK9-209ENST00000556170 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
NEK9-209ENST00000556170 A0A0U1RQV1 116 aa10.49□□□□□ -0.73
NEK9-209ENST00000556170 ZNF561-AS1K7EIQ3 104 aa10.49□□□□□ -0.73
NEK9-209ENST00000556170 RBM3P98179 157 aaKnown RBP10.49□□□□□ -0.73
NEK9-209ENST00000556170 REG3AQ06141 175 aa10.49□□□□□ -0.73
NEK9-209ENST00000556170 SDIM1Q6ZPB5 146 aa10.49□□□□□ -0.73
NEK9-209ENST00000556170 C16orf95Q9H693 158 aa10.49□□□□□ -0.73
NEK9-209ENST00000556170 NHLRC4P0CG21 123 aaPredicted RBP10.49□□□□□ -0.73
NEK9-209ENST00000556170 SLPIP03973 132 aa10.48□□□□□ -0.73
NEK9-209ENST00000556170 CHCHD10Q8WYQ3 142 aaPredicted RBP10.48□□□□□ -0.73
NEK9-209ENST00000556170 H7C423 109 aa10.48□□□□□ -0.73
NEK9-209ENST00000556170 LAMTOR3Q9UHA4 124 aa10.48□□□□□ -0.73
NEK9-209ENST00000556170 STAB1Q9NY15 2570 aa10.48□□□□□ -0.73
NEK9-209ENST00000556170 NCR3O14931 201 aa10.47□□□□□ -0.73
NEK9-209ENST00000556170 NBEAL1Q6ZS30 2694 aa10.47□□□□□ -0.73
NEK9-209ENST00000556170 BRK1Q8WUW1 75 aa10.46□□□□□ -0.73
NEK9-209ENST00000556170 TIMM17BO60830 172 aa10.46□□□□□ -0.73
NEK9-209ENST00000556170 COL6A5A8TX70 2615 aa10.46□□□□□ -0.74
NEK9-209ENST00000556170 LST1O00453 97 aa10.45□□□□□ -0.74
NEK9-209ENST00000556170 COX7CP15954 63 aa10.45□□□□□ -0.74
NEK9-209ENST00000556170 PRR3P79522 188 aaKnown RBP10.45□□□□□ -0.74
NEK9-209ENST00000556170 SPAG11BQ08648 103 aa10.45□□□□□ -0.74
NEK9-209ENST00000556170 GIG44P09565 113 aaPredicted RBP10.45□□□□□ -0.74
NEK9-209ENST00000556170 C9orf116Q5BN46 136 aaPredicted RBP10.45□□□□□ -0.74
NEK9-209ENST00000556170 CCL18P55774 89 aa10.44□□□□□ -0.74
NEK9-209ENST00000556170 A8MTW9 85 aa10.44□□□□□ -0.74
NEK9-209ENST00000556170 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
NEK9-209ENST00000556170 LYRM9A8MSI8 78 aa10.43□□□□□ -0.74
NEK9-209ENST00000556170 HIGD2BQ4VC39 106 aa10.43□□□□□ -0.74
NEK9-209ENST00000556170 SOSTDC1Q6X4U4 206 aa10.43□□□□□ -0.74
NEK9-209ENST00000556170 IGHV4-30-4P0DP06 118 aa10.42□□□□□ -0.74
NEK9-209ENST00000556170 C20orf197Q8N268 126 aa10.42□□□□□ -0.74
NEK9-209ENST00000556170 OVOL2Q9BRP0 275 aa10.42□□□□□ -0.74
NEK9-209ENST00000556170 Q8N3U1 123 aa10.42□□□□□ -0.74
NEK9-209ENST00000556170 LITAFQ99732 161 aa10.42□□□□□ -0.74
NEK9-209ENST00000556170 XAGE1AQ9HD64 81 aa10.42□□□□□ -0.74
NEK9-209ENST00000556170 RETNQ9HD89 108 aa10.42□□□□□ -0.74
NEK9-209ENST00000556170 PRB2P02812 416 aaPredicted RBP10.42□□□□□ -0.74
NEK9-209ENST00000556170 C14orf132Q9NPU4 83 aa10.42□□□□□ -0.74
NEK9-209ENST00000556170 IBA57-AS1B1ANH7 110 aa10.41□□□□□ -0.74
NEK9-209ENST00000556170 IGLV5-39A0A0G2JS06 123 aa10.41□□□□□ -0.74
NEK9-209ENST00000556170 SMIM11BQ8TCY0 68 aa10.41□□□□□ -0.74
NEK9-209ENST00000556170 HAMPP81172 84 aa10.41□□□□□ -0.74
NEK9-209ENST00000556170 RPL18AQ02543 176 aaKnown RBP10.4□□□□□ -0.74
NEK9-209ENST00000556170 KRTAP1-1Q07627 177 aa10.4□□□□□ -0.74
NEK9-209ENST00000556170 IMUPQ9GZP8 106 aa10.4□□□□□ -0.74
NEK9-209ENST00000556170 H0YGX0 51 aa10.4□□□□□ -0.75
NEK9-209ENST00000556170 CAMK2N2Q96S95 79 aa10.4□□□□□ -0.75
NEK9-209ENST00000556170 TRAV23DV6A0A075B6W5 121 aa10.39□□□□□ -0.75
NEK9-209ENST00000556170 KIR2DL5BQ8NHK3 375 aa10.39□□□□□ -0.75
NEK9-209ENST00000556170 A0A087WZ39 114 aa10.39□□□□□ -0.75
NEK9-209ENST00000556170 TMEM258P61165 79 aa10.39□□□□□ -0.75
NEK9-209ENST00000556170 GHRHP01286 108 aa10.38□□□□□ -0.75
NEK9-209ENST00000556170 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
NEK9-209ENST00000556170 C19orf73Q9NVV2 129 aa10.38□□□□□ -0.75
NEK9-209ENST00000556170 ORMDL1Q9P0S3 153 aa10.38□□□□□ -0.75
NEK9-209ENST00000556170 CELA1Q9UNI1 258 aa10.38□□□□□ -0.75
NEK9-209ENST00000556170 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
NEK9-209ENST00000556170 KRTAP10-3P60369 221 aa10.37□□□□□ -0.75
NEK9-209ENST00000556170 LINC00337Q8N6G1 96 aa10.37□□□□□ -0.75
NEK9-209ENST00000556170 SPATA3Q8NHX4 192 aa10.37□□□□□ -0.75
NEK9-209ENST00000556170 UBL5Q9BZL1 73 aa10.37□□□□□ -0.75
NEK9-209ENST00000556170 IGLV5-45A0A087WSX0 123 aa10.37□□□□□ -0.75
NEK9-209ENST00000556170 MIFP14174 115 aa10.37□□□□□ -0.75
NEK9-209ENST00000556170 CD164L2Q6UWJ8 174 aa10.36□□□□□ -0.75
NEK9-209ENST00000556170 CSNK1G2-AS1Q8NCQ2 148 aa10.36□□□□□ -0.75
NEK9-209ENST00000556170 X6R8D5 127 aa10.36□□□□□ -0.75
NEK9-209ENST00000556170 PLAC8L1A1L4L8 177 aa10.36□□□□□ -0.75
NEK9-209ENST00000556170 VPS13CQ709C8 3753 aa10.35□□□□□ -0.75
NEK9-209ENST00000556170 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
NEK9-209ENST00000556170 C4orf26Q17RF5 130 aa10.35□□□□□ -0.75
NEK9-209ENST00000556170 V9GYY9 64 aa10.35□□□□□ -0.75
NEK9-209ENST00000556170 SERP2Q8N6R1 65 aa10.35□□□□□ -0.75
NEK9-209ENST00000556170 HIVEP1P15822 2718 aa10.34□□□□□ -0.75
NEK9-209ENST00000556170 C6orf99Q4VX62 202 aa10.34□□□□□ -0.75
NEK9-209ENST00000556170 C6orf223Q8N319 242 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms