RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 CARHSP1Q9Y2V2 147 aaKnown RBP11.25□□□□□ -0.61
CDKN3-209ENST00000556102 C22orf24Q9Y442 160 aa11.25□□□□□ -0.61
CDKN3-209ENST00000556102 SEC11AP67812 179 aa11.24□□□□□ -0.61
CDKN3-209ENST00000556102 LBHQ53QV2 105 aaPredicted RBP11.24□□□□□ -0.61
CDKN3-209ENST00000556102 PAPPA-AS1Q5QFB9 102 aa11.24□□□□□ -0.61
CDKN3-209ENST00000556102 XAGE1AQ9HD64 81 aa11.24□□□□□ -0.61
CDKN3-209ENST00000556102 NXT2Q9NPJ8 142 aaKnown RBP11.24□□□□□ -0.61
CDKN3-209ENST00000556102 CDKN2A-AS1Q9UH64 79 aa11.23□□□□□ -0.61
CDKN3-209ENST00000556102 F8VRH5 84 aa11.22□□□□□ -0.61
CDKN3-209ENST00000556102 G0S2P27469 103 aa11.22□□□□□ -0.61
CDKN3-209ENST00000556102 TIMM17AQ99595 171 aa11.22□□□□□ -0.61
CDKN3-209ENST00000556102 PRR4Q16378 134 aa11.21□□□□□ -0.61
CDKN3-209ENST00000556102 CTDSP1Q9GZU7 261 aa11.21□□□□□ -0.61
CDKN3-209ENST00000556102 GEMIN7Q9H840 131 aaKnown RBP11.21□□□□□ -0.61
CDKN3-209ENST00000556102 CXCL5P42830 114 aa11.2□□□□□ -0.62
CDKN3-209ENST00000556102 TP73-AS1Q9UF72 201 aa11.2□□□□□ -0.62
CDKN3-209ENST00000556102 TOMM6Q96B49 74 aa11.19□□□□□ -0.62
CDKN3-209ENST00000556102 MRPL55Q7Z7F7 128 aaKnown RBP11.18□□□□□ -0.62
CDKN3-209ENST00000556102 RPL28P46779 137 aaKnown RBP11.16□□□□□ -0.62
CDKN3-209ENST00000556102 SMIM1B2RUZ4 78 aa11.15□□□□□ -0.62
CDKN3-209ENST00000556102 BCE1O60756 84 aa11.15□□□□□ -0.62
CDKN3-209ENST00000556102 ERASQ7Z444 233 aa11.15□□□□□ -0.62
CDKN3-209ENST00000556102 RAB14P61106 215 aa11.14□□□□□ -0.63
CDKN3-209ENST00000556102 KIAA1644Q3SXP7 199 aa11.14□□□□□ -0.63
CDKN3-209ENST00000556102 PDZD11Q5EBL8 140 aa11.14□□□□□ -0.63
CDKN3-209ENST00000556102 SCGB3A1Q96QR1 104 aa11.14□□□□□ -0.63
CDKN3-209ENST00000556102 TINCRA0A1B0GVN0 87 aa11.13□□□□□ -0.63
CDKN3-209ENST00000556102 COX7B2Q8TF08 81 aa11.13□□□□□ -0.63
CDKN3-209ENST00000556102 IGLV5-45A0A087WSX0 123 aa11.12□□□□□ -0.63
CDKN3-209ENST00000556102 A0A087X002 238 aa11.12□□□□□ -0.63
CDKN3-209ENST00000556102 LINC00167Q96N53 147 aa11.12□□□□□ -0.63
CDKN3-209ENST00000556102 LINC01549A6NIU2 74 aa11.11□□□□□ -0.63
CDKN3-209ENST00000556102 TSPAN13O95857 204 aa11.11□□□□□ -0.63
CDKN3-209ENST00000556102 ADCYAP1P18509 176 aa11.11□□□□□ -0.63
CDKN3-209ENST00000556102 RPL37AP8A6NKH3 93 aa11.1□□□□□ -0.63
CDKN3-209ENST00000556102 CRYGAP11844 174 aa11.1□□□□□ -0.63
CDKN3-209ENST00000556102 MUC2Q02817 5179 aa11.1□□□□□ -0.63
CDKN3-209ENST00000556102 IGLV5-37A0A075B6J1 123 aa11.09□□□□□ -0.63
CDKN3-209ENST00000556102 TRAV9-1A0A075B6T8 112 aa11.09□□□□□ -0.63
CDKN3-209ENST00000556102 TYMSOSQ8TAI1 123 aa11.09□□□□□ -0.63
CDKN3-209ENST00000556102 LINC01546A6NGU7 62 aa11.08□□□□□ -0.64
CDKN3-209ENST00000556102 CST9LQ9H4G1 147 aa11.08□□□□□ -0.64
CDKN3-209ENST00000556102 GAGE10A6NGK3 116 aa11.07□□□□□ -0.64
CDKN3-209ENST00000556102 SPINK8P0C7L1 97 aa11.07□□□□□ -0.64
CDKN3-209ENST00000556102 RAB5BP61020 215 aa11.06□□□□□ -0.64
CDKN3-209ENST00000556102 NKAPP1Q8N9T2 125 aa11.06□□□□□ -0.64
CDKN3-209ENST00000556102 PMVKQ15126 192 aa11.05□□□□□ -0.64
CDKN3-209ENST00000556102 CLLU1Q5K131 121 aa11.05□□□□□ -0.64
CDKN3-209ENST00000556102 KRTAP13-1Q8IUC0 172 aa11.05□□□□□ -0.64
CDKN3-209ENST00000556102 GNB1LQ9BYB4 327 aa11.05□□□□□ -0.64
CDKN3-209ENST00000556102 UBE2AP49459 152 aa11.04□□□□□ -0.64
CDKN3-209ENST00000556102 MRPL18Q9H0U6 180 aaKnown RBP11.04□□□□□ -0.64
CDKN3-209ENST00000556102 H3BRM9 83 aa11.03□□□□□ -0.64
CDKN3-209ENST00000556102 ANAPC11Q9NYG5 84 aa11.03□□□□□ -0.64
CDKN3-209ENST00000556102 A0A0U1RQV1 116 aa11.02□□□□□ -0.65
CDKN3-209ENST00000556102 ATP5LO75964 103 aa11.02□□□□□ -0.65
CDKN3-209ENST00000556102 TMEM218A2RU14 115 aa11.01□□□□□ -0.65
CDKN3-209ENST00000556102 S100PP25815 95 aa11.01□□□□□ -0.65
CDKN3-209ENST00000556102 KRTAP13-2Q52LG2 175 aa11.01□□□□□ -0.65
CDKN3-209ENST00000556102 UQCC3Q6UW78 93 aa11.01□□□□□ -0.65
CDKN3-209ENST00000556102 FA2HQ7L5A8 372 aa11.01□□□□□ -0.65
CDKN3-209ENST00000556102 SMCO4Q9NRQ5 59 aa11.01□□□□□ -0.65
CDKN3-209ENST00000556102 IGKV2-28A0A075B6P5 120 aa11□□□□□ -0.65
CDKN3-209ENST00000556102 IGKV2D-28P01615 120 aa11□□□□□ -0.65
CDKN3-209ENST00000556102 FAM229BQ4G0N7 80 aa11□□□□□ -0.65
CDKN3-209ENST00000556102 SCO1O75880 301 aa10.99□□□□□ -0.65
CDKN3-209ENST00000556102 COX19Q49B96 90 aa10.99□□□□□ -0.65
CDKN3-209ENST00000556102 IGLV5-39A0A0G2JS06 123 aa10.98□□□□□ -0.65
CDKN3-209ENST00000556102 IGLC3P0DOY3 106 aa10.98□□□□□ -0.65
CDKN3-209ENST00000556102 PFN2P35080 140 aa10.98□□□□□ -0.65
CDKN3-209ENST00000556102 LINC00304Q8N9R0 145 aa10.97□□□□□ -0.65
CDKN3-209ENST00000556102 VPREB1P12018 145 aa10.96□□□□□ -0.65
CDKN3-209ENST00000556102 FABP9Q0Z7S8 132 aa10.96□□□□□ -0.65
CDKN3-209ENST00000556102 SEC11CQ9BY50 192 aa10.96□□□□□ -0.65
CDKN3-209ENST00000556102 ZNF22P17026 224 aaPredicted RBP10.95□□□□□ -0.66
CDKN3-209ENST00000556102 PRLHP81277 87 aa10.95□□□□□ -0.66
CDKN3-209ENST00000556102 SND1-IT1Q9HBX3 110 aa10.95□□□□□ -0.66
CDKN3-209ENST00000556102 ERG28Q9UKR5 140 aa10.95□□□□□ -0.66
CDKN3-209ENST00000556102 IGKV2D-26A0A0A0MRZ7 120 aa10.94□□□□□ -0.66
CDKN3-209ENST00000556102 NDUFA6P56556 154 aa10.94□□□□□ -0.66
CDKN3-209ENST00000556102 RETNLBQ9BQ08 111 aa10.94□□□□□ -0.66
CDKN3-209ENST00000556102 TMEM126AQ9H061 195 aa10.94□□□□□ -0.66
CDKN3-209ENST00000556102 A0A096LNJ9 63 aa10.93□□□□□ -0.66
CDKN3-209ENST00000556102 RPL24P83731 157 aaKnown RBP10.93□□□□□ -0.66
CDKN3-209ENST00000556102 COX17Q14061 63 aa10.93□□□□□ -0.66
CDKN3-209ENST00000556102 FAM19A1Q7Z5A9 133 aa10.93□□□□□ -0.66
CDKN3-209ENST00000556102 TMEM238C9JI98 176 aa10.92□□□□□ -0.66
CDKN3-209ENST00000556102 M0R378 163 aa10.9□□□□□ -0.66
CDKN3-209ENST00000556102 CTAG1AP78358 180 aa10.9□□□□□ -0.66
CDKN3-209ENST00000556102 FAT4Q6V0I7 4981 aa10.89□□□□□ -0.67
CDKN3-209ENST00000556102 HBDP02042 147 aa10.89□□□□□ -0.67
CDKN3-209ENST00000556102 SFTA2Q6UW10 78 aa10.89□□□□□ -0.67
CDKN3-209ENST00000556102 URB1-AS1Q96HZ7 61 aa10.89□□□□□ -0.67
CDKN3-209ENST00000556102 ZNF625Q96I27 306 aaPredicted RBP10.89□□□□□ -0.67
CDKN3-209ENST00000556102 LINC00614P0C842 121 aa10.88□□□□□ -0.67
CDKN3-209ENST00000556102 TPRXLQ17RH7 258 aa10.88□□□□□ -0.67
CDKN3-209ENST00000556102 Q8NDZ9 215 aa10.88□□□□□ -0.67
CDKN3-209ENST00000556102 C18orf32Q8TCD1 76 aa10.88□□□□□ -0.67
CDKN3-209ENST00000556102 C11orf86A6NJI1 115 aa10.87□□□□□ -0.67
CDKN3-209ENST00000556102 IFITM2Q01629 132 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms