RNA–Protein interactions for RNA: ENST00000554894.5

LINC01578-204, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 3 BASIC

Gene LINC01578, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-204ENST00000554894 SMCO4Q9NRQ5 59 aa17.42■□□□□ 0.38
LINC01578-204ENST00000554894 LINC01549A6NIU2 74 aa17.41■□□□□ 0.38
LINC01578-204ENST00000554894 NDUFC2-KCTD14E9PQ53 114 aa17.41■□□□□ 0.38
LINC01578-204ENST00000554894 CKS1BP61024 79 aa17.41■□□□□ 0.38
LINC01578-204ENST00000554894 C6orf226Q5I0X4 101 aa17.41■□□□□ 0.38
LINC01578-204ENST00000554894 LINC01600Q96MT4 127 aa17.41■□□□□ 0.38
LINC01578-204ENST00000554894 TNXBP22105 4242 aa17.41■□□□□ 0.38
LINC01578-204ENST00000554894 APOC3P02656 99 aa17.39■□□□□ 0.37
LINC01578-204ENST00000554894 C1orf137Q5JT78 98 aa17.39■□□□□ 0.37
LINC01578-204ENST00000554894 LINC00469Q8N7U9 141 aa17.39■□□□□ 0.37
LINC01578-204ENST00000554894 PLA2G2DQ9UNK4 145 aa17.39■□□□□ 0.37
LINC01578-204ENST00000554894 REG3GQ6UW15 175 aa17.38■□□□□ 0.37
LINC01578-204ENST00000554894 KRTAP7-1Q8IUC3 87 aa17.38■□□□□ 0.37
LINC01578-204ENST00000554894 C9orf129Q5T035 196 aaKnown RBP17.37■□□□□ 0.37
LINC01578-204ENST00000554894 TINCRA0A1B0GVN0 87 aa17.36■□□□□ 0.37
LINC01578-204ENST00000554894 TRAPPC1Q9Y5R8 145 aa17.36■□□□□ 0.37
LINC01578-204ENST00000554894 SMIM1B2RUZ4 78 aa17.35■□□□□ 0.37
LINC01578-204ENST00000554894 M0QXV9 152 aa17.35■□□□□ 0.37
LINC01578-204ENST00000554894 KRTAP11-1Q8IUC1 163 aa17.35■□□□□ 0.37
LINC01578-204ENST00000554894 CST9LQ9H4G1 147 aa17.35■□□□□ 0.37
LINC01578-204ENST00000554894 IGLV5-45A0A087WSX0 123 aa17.33■□□□□ 0.36
LINC01578-204ENST00000554894 NDUFA5Q16718 116 aa17.33■□□□□ 0.36
LINC01578-204ENST00000554894 F8VRH5 84 aa17.32■□□□□ 0.36
LINC01578-204ENST00000554894 SNAPINO95295 136 aa17.32■□□□□ 0.36
LINC01578-204ENST00000554894 PMVKQ15126 192 aa17.32■□□□□ 0.36
LINC01578-204ENST00000554894 SVBPQ8N300 66 aa17.32■□□□□ 0.36
LINC01578-204ENST00000554894 C18orf32Q8TCD1 76 aa17.32■□□□□ 0.36
LINC01578-204ENST00000554894 CXCL5P42830 114 aa17.31■□□□□ 0.36
LINC01578-204ENST00000554894 URB1-AS1Q96HZ7 61 aa17.31■□□□□ 0.36
LINC01578-204ENST00000554894 A0A096LNJ9 63 aa17.3■□□□□ 0.36
LINC01578-204ENST00000554894 PDZD11Q5EBL8 140 aa17.3■□□□□ 0.36
LINC01578-204ENST00000554894 UBE2BP63146 152 aa17.29■□□□□ 0.36
LINC01578-204ENST00000554894 COX7B2Q8TF08 81 aa17.29■□□□□ 0.36
LINC01578-204ENST00000554894 IGLV7-43P04211 117 aa17.28■□□□□ 0.36
LINC01578-204ENST00000554894 SPINK8P0C7L1 97 aa17.28■□□□□ 0.36
LINC01578-204ENST00000554894 LINC00614P0C842 121 aa17.27■□□□□ 0.36
LINC01578-204ENST00000554894 XAGE1AQ9HD64 81 aa17.27■□□□□ 0.36
LINC01578-204ENST00000554894 ODF1Q14990 250 aa17.26■□□□□ 0.35
LINC01578-204ENST00000554894 KRTAP10-8P60410 259 aa17.25■□□□□ 0.35
LINC01578-204ENST00000554894 PMCHL1Q16048 86 aa17.25■□□□□ 0.35
LINC01578-204ENST00000554894 HBDP02042 147 aa17.24■□□□□ 0.35
LINC01578-204ENST00000554894 NDUFA6P56556 154 aa17.23■□□□□ 0.35
LINC01578-204ENST00000554894 IGLC3P0DOY3 106 aa17.21■□□□□ 0.35
LINC01578-204ENST00000554894 H3BRM9 83 aa17.2■□□□□ 0.34
LINC01578-204ENST00000554894 YPEL4Q96NS1 127 aa17.2■□□□□ 0.34
LINC01578-204ENST00000554894 RAB5BP61020 215 aa17.19■□□□□ 0.34
LINC01578-204ENST00000554894 DIRC1Q969H9 104 aa17.19■□□□□ 0.34
LINC01578-204ENST00000554894 C22orf24Q9Y442 160 aa17.19■□□□□ 0.34
LINC01578-204ENST00000554894 H0Y9J4 135 aa17.16■□□□□ 0.34
LINC01578-204ENST00000554894 ZNF22P17026 224 aaPredicted RBP17.16■□□□□ 0.34
LINC01578-204ENST00000554894 ATP5LO75964 103 aa17.14■□□□□ 0.33
LINC01578-204ENST00000554894 IGLV5-39A0A0G2JS06 123 aa17.13■□□□□ 0.33
LINC01578-204ENST00000554894 LBHQ53QV2 105 aaPredicted RBP17.12■□□□□ 0.33
LINC01578-204ENST00000554894 TP73-AS1Q9UF72 201 aa17.11■□□□□ 0.33
LINC01578-204ENST00000554894 MRPL55Q7Z7F7 128 aaKnown RBP17.1■□□□□ 0.33
LINC01578-204ENST00000554894 BAGE3Q86Y29 109 aa17.1■□□□□ 0.33
LINC01578-204ENST00000554894 CBLN2Q8IUK8 224 aa17.1■□□□□ 0.33
LINC01578-204ENST00000554894 C11orf86A6NJI1 115 aa17.09■□□□□ 0.33
LINC01578-204ENST00000554894 NUPR1O60356 82 aa17.07■□□□□ 0.32
LINC01578-204ENST00000554894 PRR26Q8N8Z3 221 aa17.07■□□□□ 0.32
LINC01578-204ENST00000554894 CHCHD1Q96BP2 118 aaKnown RBP17.07■□□□□ 0.32
LINC01578-204ENST00000554894 TMEM170BQ5T4T1 132 aa17.06■□□□□ 0.32
LINC01578-204ENST00000554894 UBR4Q5T4S7 5183 aa17.06■□□□□ 0.32
LINC01578-204ENST00000554894 PFN2P35080 140 aa17.04■□□□□ 0.32
LINC01578-204ENST00000554894 CHTOPQ9Y3Y2 248 aaKnown RBP17.04■□□□□ 0.32
LINC01578-204ENST00000554894 KRTAP1-4P0C5Y4 121 aa17.03■□□□□ 0.32
LINC01578-204ENST00000554894 LINC00167Q96N53 147 aa17.03■□□□□ 0.32
LINC01578-204ENST00000554894 ZNF861PO60384 105 aa17.02■□□□□ 0.32
LINC01578-204ENST00000554894 IGLV5-37A0A075B6J1 123 aa17.01■□□□□ 0.31
LINC01578-204ENST00000554894 GAGE10A6NGK3 116 aa17.01■□□□□ 0.31
LINC01578-204ENST00000554894 RPL37AP8A6NKH3 93 aa17.01■□□□□ 0.31
LINC01578-204ENST00000554894 ERG28Q9UKR5 140 aa17.01■□□□□ 0.31
LINC01578-204ENST00000554894 IFI27L1Q96BM0 104 aa17■□□□□ 0.31
LINC01578-204ENST00000554894 NKAPP1Q8N9T2 125 aa16.99■□□□□ 0.31
LINC01578-204ENST00000554894 ZNF625Q96I27 306 aaPredicted RBP16.99■□□□□ 0.31
LINC01578-204ENST00000554894 TRAV12-1A0A0B4J245 112 aa16.98■□□□□ 0.31
LINC01578-204ENST00000554894 IGLV1-50A0A075B6I6 118 aa16.97■□□□□ 0.31
LINC01578-204ENST00000554894 BCE1O60756 84 aa16.96■□□□□ 0.31
LINC01578-204ENST00000554894 HSBP1O75506 76 aa16.96■□□□□ 0.31
LINC01578-204ENST00000554894 TRGC2P03986 189 aa16.96■□□□□ 0.31
LINC01578-204ENST00000554894 SLC7A5P1Q8MH63 180 aa16.96■□□□□ 0.31
LINC01578-204ENST00000554894 FAM19A2Q8N3H0 131 aa16.96■□□□□ 0.31
LINC01578-204ENST00000554894 SCO1O75880 301 aa16.95■□□□□ 0.3
LINC01578-204ENST00000554894 SND1-IT1Q9HBX3 110 aa16.95■□□□□ 0.3
LINC01578-204ENST00000554894 COX17Q14061 63 aa16.94■□□□□ 0.3
LINC01578-204ENST00000554894 TMEM223A0PJW6 202 aa16.93■□□□□ 0.3
LINC01578-204ENST00000554894 SFTA2Q6UW10 78 aa16.93■□□□□ 0.3
LINC01578-204ENST00000554894 RPL28P46779 137 aaKnown RBP16.92■□□□□ 0.3
LINC01578-204ENST00000554894 VPREB1P12018 145 aa16.91■□□□□ 0.3
LINC01578-204ENST00000554894 LRP2P98164 4655 aa16.91■□□□□ 0.3
LINC01578-204ENST00000554894 IGKV2-28A0A075B6P5 120 aa16.89■□□□□ 0.29
LINC01578-204ENST00000554894 IGKV2D-28P01615 120 aa16.89■□□□□ 0.29
LINC01578-204ENST00000554894 RPL13AP40429 203 aaKnown RBP16.87■□□□□ 0.29
LINC01578-204ENST00000554894 LINC00310P59036 64 aa16.87■□□□□ 0.29
LINC01578-204ENST00000554894 H0Y8G0 127 aa16.86■□□□□ 0.29
LINC01578-204ENST00000554894 SERF1AO75920 110 aa16.86■□□□□ 0.29
LINC01578-204ENST00000554894 Q8NDZ9 215 aa16.86■□□□□ 0.29
LINC01578-204ENST00000554894 RPL24P83731 157 aaKnown RBP16.85■□□□□ 0.29
LINC01578-204ENST00000554894 UBE2AP49459 152 aa16.84■□□□□ 0.29
LINC01578-204ENST00000554894 LINC00158P58513 81 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms