RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 C9orf62Q8N4C0 152 aa3.06□□□□□ -1.92
HOXB3-213ENST00000552000 SFT2D1Q8WV19 159 aa3.06□□□□□ -1.92
HOXB3-213ENST00000552000 ST20Q9HBF5 79 aa3.06□□□□□ -1.92
HOXB3-213ENST00000552000 FXYD6-FXYD2A0A087WZ82 144 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 TRBV6-5A0A0K0K1A5 114 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 SMLR1H3BR10 107 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 UPK1BO75841 260 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 PRSS2P07478 247 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 IFITM3Q01628 133 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 LINC00242Q5T6M2 205 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 Q6ZUT4 128 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 SMIM15Q7Z3B0 74 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 CNFNQ9BYD5 112 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
HOXB3-213ENST00000552000 IGKV2D-26A0A0A0MRZ7 120 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 NDUFC2-KCTD14E9PQ53 114 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 PPP1R2P9O14990 202 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 BCE1O60756 84 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 CFC1BP0CG36 223 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 FCER1GP30273 86 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 POLR2KP53803 58 aaKnown RBP3.04□□□□□ -1.92
HOXB3-213ENST00000552000 MT1HP80294 61 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 KRTAP13-3Q3SY46 172 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 C2orf82Q6UX34 121 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 MTURNQ8N3F0 131 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 KCNRGQ8N5I3 272 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 FAM213BQ8TBF2 198 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 MBD3L1Q8WWY6 194 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 UBE2D4Q9Y2X8 147 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 C22orf24Q9Y442 160 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 V9GYY9 64 aa3.04□□□□□ -1.92
HOXB3-213ENST00000552000 IGHV3OR16-9A0A0B4J2B5 98 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 TRBV27A0A0K0K1C4 114 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 GNG4P50150 75 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 KIAA0087Q14695 138 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 RGS21Q2M5E4 152 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 FAM229BQ4G0N7 80 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 BOD1L2Q8IYS8 172 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 S100ZQ8WXG8 99 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 C11orf52Q96A22 123 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 XAGE1AQ9HD64 81 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 CYTL1Q9NRR1 136 aa3.03□□□□□ -1.92
HOXB3-213ENST00000552000 TRBV20OR9-2A0A075B6H5 130 aa3.02□□□□□ -1.93
HOXB3-213ENST00000552000 TRBV30A0A0K0K1B3 111 aa3.02□□□□□ -1.93
HOXB3-213ENST00000552000 CCL20P78556 96 aa3.02□□□□□ -1.93
HOXB3-213ENST00000552000 SMAGPQ0VAQ4 97 aa3.02□□□□□ -1.93
HOXB3-213ENST00000552000 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
HOXB3-213ENST00000552000 FP248Q71RG6 208 aaPredicted RBP3.02□□□□□ -1.93
HOXB3-213ENST00000552000 PACRGQ96M98 296 aaPredicted RBP3.02□□□□□ -1.93
HOXB3-213ENST00000552000 BIN3Q9NQY0 253 aa3.02□□□□□ -1.93
HOXB3-213ENST00000552000 GNG13Q9P2W3 67 aa3.02□□□□□ -1.93
HOXB3-213ENST00000552000 USH2AO75445 5202 aa3.02□□□□□ -1.93
HOXB3-213ENST00000552000 TGIF2-C20orf24A0A0A6YYL0 155 aa3.01□□□□□ -1.93
HOXB3-213ENST00000552000 RPL37AP8A6NKH3 93 aa3.01□□□□□ -1.93
HOXB3-213ENST00000552000 IFITM10A6NMD0 228 aa3.01□□□□□ -1.93
HOXB3-213ENST00000552000 SMKR1H3BMG3 65 aa3.01□□□□□ -1.93
HOXB3-213ENST00000552000 GIPP09681 153 aaPredicted RBP3.01□□□□□ -1.93
HOXB3-213ENST00000552000 UBE2AP49459 152 aa3.01□□□□□ -1.93
HOXB3-213ENST00000552000 RPL39P62891 51 aaKnown RBP3.01□□□□□ -1.93
HOXB3-213ENST00000552000 MRPL55Q7Z7F7 128 aaKnown RBP3.01□□□□□ -1.93
HOXB3-213ENST00000552000 C3orf22Q8N5N4 141 aa3.01□□□□□ -1.93
HOXB3-213ENST00000552000 FAM104AQ969W3 186 aa3.01□□□□□ -1.93
HOXB3-213ENST00000552000 SMIM12Q96EX1 92 aa3.01□□□□□ -1.93
HOXB3-213ENST00000552000 TIMM21Q9BVV7 248 aa3.01□□□□□ -1.93
HOXB3-213ENST00000552000 MED9Q9NWA0 146 aa3.01□□□□□ -1.93
HOXB3-213ENST00000552000 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
HOXB3-213ENST00000552000 ZNF727A8MUV8 499 aa3□□□□□ -1.93
HOXB3-213ENST00000552000 UMAD1C9J7I0 102 aa3□□□□□ -1.93
HOXB3-213ENST00000552000 ARPC5O15511 151 aa3□□□□□ -1.93
HOXB3-213ENST00000552000 KIAA1644Q3SXP7 199 aa3□□□□□ -1.93
HOXB3-213ENST00000552000 KRTAP13-1Q8IUC0 172 aa3□□□□□ -1.93
HOXB3-213ENST00000552000 LINC00167Q96N53 147 aa3□□□□□ -1.93
HOXB3-213ENST00000552000 KIR2DL4Q99706 377 aa3□□□□□ -1.93
HOXB3-213ENST00000552000 MANBALQ9NQG1 85 aa3□□□□□ -1.93
HOXB3-213ENST00000552000 TP73-AS1Q9UF72 201 aa3□□□□□ -1.93
HOXB3-213ENST00000552000 K7EN84 100 aa2.99□□□□□ -1.93
HOXB3-213ENST00000552000 RAB4AP20338 218 aa2.99□□□□□ -1.93
HOXB3-213ENST00000552000 MT3P25713 68 aa2.99□□□□□ -1.93
HOXB3-213ENST00000552000 HBBP68871 147 aa2.99□□□□□ -1.93
HOXB3-213ENST00000552000 LINC00299Q6ZSB3 139 aa2.99□□□□□ -1.93
HOXB3-213ENST00000552000 AMN1Q8IY45 258 aa2.99□□□□□ -1.93
HOXB3-213ENST00000552000 TMEM191AQ9H0A3 160 aa2.99□□□□□ -1.93
HOXB3-213ENST00000552000 TOMM7Q9P0U1 55 aa2.99□□□□□ -1.93
HOXB3-213ENST00000552000 A0A1B0GWB2 263 aa2.98□□□□□ -1.93
HOXB3-213ENST00000552000 A8MWL6 223 aa2.98□□□□□ -1.93
HOXB3-213ENST00000552000 M0R2T5 61 aa2.98□□□□□ -1.93
HOXB3-213ENST00000552000 GATCO43716 136 aaKnown RBP2.98□□□□□ -1.93
HOXB3-213ENST00000552000 RPL32P62910 135 aaKnown RBP2.98□□□□□ -1.93
HOXB3-213ENST00000552000 PRLHP81277 87 aa2.98□□□□□ -1.93
HOXB3-213ENST00000552000 MRPS36P82909 103 aaKnown RBP2.98□□□□□ -1.93
HOXB3-213ENST00000552000 SPAG11AQ6PDA7 123 aa2.98□□□□□ -1.93
HOXB3-213ENST00000552000 NRACQ8N912 160 aa2.98□□□□□ -1.93
HOXB3-213ENST00000552000 BORCS7Q96B45 105 aa2.98□□□□□ -1.93
HOXB3-213ENST00000552000 SPANXA1Q9NS26 97 aa2.98□□□□□ -1.93
HOXB3-213ENST00000552000 A0A1B0GUT8 65 aa2.97□□□□□ -1.93
HOXB3-213ENST00000552000 A0A1B0GVG6 124 aa2.97□□□□□ -1.93
HOXB3-213ENST00000552000 PDE6DO43924 150 aa2.97□□□□□ -1.93
HOXB3-213ENST00000552000 PPP1R17O96001 155 aa2.97□□□□□ -1.93
HOXB3-213ENST00000552000 CKS1BP61024 79 aa2.97□□□□□ -1.93
HOXB3-213ENST00000552000 DAND5Q8N907 189 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms