RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 C2orf82Q6UX34 121 aa11.94□□□□□ -0.5
DDX54-209ENST00000551912 SCXQ7RTU7 201 aa11.94□□□□□ -0.5
DDX54-209ENST00000551912 ODF1Q14990 250 aa11.93□□□□□ -0.5
DDX54-209ENST00000551912 TMEM170BQ5T4T1 132 aa11.93□□□□□ -0.5
DDX54-209ENST00000551912 LOC107984640A0A0U1RRK4 108 aa11.92□□□□□ -0.5
DDX54-209ENST00000551912 PANO1I0J062 215 aa11.92□□□□□ -0.5
DDX54-209ENST00000551912 CHTF8P0CG12 524 aa11.92□□□□□ -0.5
DDX54-209ENST00000551912 CIRBPQ14011 172 aaKnown RBP11.92□□□□□ -0.5
DDX54-209ENST00000551912 COX7B2Q8TF08 81 aa11.92□□□□□ -0.5
DDX54-209ENST00000551912 MAP1LC3CQ9BXW4 147 aa11.92□□□□□ -0.5
DDX54-209ENST00000551912 C6orf48Q9UBA6 75 aa11.92□□□□□ -0.5
DDX54-209ENST00000551912 A0A096LNI7 61 aa11.91□□□□□ -0.5
DDX54-209ENST00000551912 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
DDX54-209ENST00000551912 TRBV30A0A0K0K1B3 111 aa11.91□□□□□ -0.5
DDX54-209ENST00000551912 CXCL5P42830 114 aa11.91□□□□□ -0.5
DDX54-209ENST00000551912 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
DDX54-209ENST00000551912 SPACA4Q8TDM5 124 aa11.91□□□□□ -0.5
DDX54-209ENST00000551912 DPH3Q96FX2 82 aa11.91□□□□□ -0.5
DDX54-209ENST00000551912 IGLV5-39A0A0G2JS06 123 aa11.9□□□□□ -0.5
DDX54-209ENST00000551912 LINC00474Q9P2X8 69 aa11.9□□□□□ -0.5
DDX54-209ENST00000551912 MAJINQ3KP22 176 aa11.89□□□□□ -0.51
DDX54-209ENST00000551912 PTTG1IPP53801 180 aa11.88□□□□□ -0.51
DDX54-209ENST00000551912 RPL18AQ02543 176 aaKnown RBP11.88□□□□□ -0.51
DDX54-209ENST00000551912 GAGE2BQ13066 116 aa11.88□□□□□ -0.51
DDX54-209ENST00000551912 SMR3BP02814 79 aaPredicted RBP11.87□□□□□ -0.51
DDX54-209ENST00000551912 TLX1NBP0CAT3 122 aa11.87□□□□□ -0.51
DDX54-209ENST00000551912 PLNP26678 52 aa11.87□□□□□ -0.51
DDX54-209ENST00000551912 Q8N1X5 172 aa11.87□□□□□ -0.51
DDX54-209ENST00000551912 FAT1Q14517 4588 aa11.86□□□□□ -0.51
DDX54-209ENST00000551912 A0A087WYN8 130 aa11.86□□□□□ -0.51
DDX54-209ENST00000551912 TMEM223A0PJW6 202 aa11.86□□□□□ -0.51
DDX54-209ENST00000551912 SYS1-DBNDD2H3BUS1 97 aa11.85□□□□□ -0.51
DDX54-209ENST00000551912 DPM2O94777 84 aa11.85□□□□□ -0.51
DDX54-209ENST00000551912 C9orf116Q5BN46 136 aaPredicted RBP11.85□□□□□ -0.51
DDX54-209ENST00000551912 PMCHL2Q9BQD1 86 aa11.85□□□□□ -0.51
DDX54-209ENST00000551912 NDUFC2-KCTD14E9PQ53 114 aa11.84□□□□□ -0.51
DDX54-209ENST00000551912 STPG4Q8N801 248 aa11.84□□□□□ -0.51
DDX54-209ENST00000551912 KRTAP17-1Q9BYP8 105 aa11.84□□□□□ -0.51
DDX54-209ENST00000551912 IGKCP01834 107 aa11.83□□□□□ -0.52
DDX54-209ENST00000551912 Q6ZRP5 223 aa11.83□□□□□ -0.52
DDX54-209ENST00000551912 PLAC8Q9NZF1 115 aa11.83□□□□□ -0.52
DDX54-209ENST00000551912 S100A6P06703 90 aa11.82□□□□□ -0.52
DDX54-209ENST00000551912 PET117Q6UWS5 81 aa11.82□□□□□ -0.52
DDX54-209ENST00000551912 FAM229AH3BQW9 127 aa11.81□□□□□ -0.52
DDX54-209ENST00000551912 C3orf79P0CE67 100 aa11.81□□□□□ -0.52
DDX54-209ENST00000551912 GAGE2EQ4V326 116 aa11.81□□□□□ -0.52
DDX54-209ENST00000551912 LINC00528Q8N1L1 170 aa11.81□□□□□ -0.52
DDX54-209ENST00000551912 GAGE2DQ9UEU5 116 aa11.81□□□□□ -0.52
DDX54-209ENST00000551912 EPM2AB3EWF7 344 aa11.8□□□□□ -0.52
DDX54-209ENST00000551912 SFTA2Q6UW10 78 aa11.8□□□□□ -0.52
DDX54-209ENST00000551912 S100A2P29034 98 aa11.79□□□□□ -0.52
DDX54-209ENST00000551912 KRTDAPP60985 99 aa11.79□□□□□ -0.52
DDX54-209ENST00000551912 Q5VSD8 79 aa11.79□□□□□ -0.52
DDX54-209ENST00000551912 LINC01545Q5VT33 79 aa11.79□□□□□ -0.52
DDX54-209ENST00000551912 HIST3H2BBQ8N257 126 aa11.79□□□□□ -0.52
DDX54-209ENST00000551912 HERVK_113P61574 105 aa11.78□□□□□ -0.52
DDX54-209ENST00000551912 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
DDX54-209ENST00000551912 A0A1W2PNN7 141 aa11.75□□□□□ -0.53
DDX54-209ENST00000551912 PLEKHB2Q96CS7 222 aa11.75□□□□□ -0.53
DDX54-209ENST00000551912 HIST1H2BLQ99880 126 aa11.75□□□□□ -0.53
DDX54-209ENST00000551912 KRTAP4-5Q9BYR2 181 aa11.75□□□□□ -0.53
DDX54-209ENST00000551912 C20orf202A1L168 122 aa11.74□□□□□ -0.53
DDX54-209ENST00000551912 LEPROTO15243 131 aa11.74□□□□□ -0.53
DDX54-209ENST00000551912 SNRPEP62304 92 aaKnown RBP11.74□□□□□ -0.53
DDX54-209ENST00000551912 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
DDX54-209ENST00000551912 PFN2P35080 140 aa11.73□□□□□ -0.53
DDX54-209ENST00000551912 C9orf129Q5T035 196 aaKnown RBP11.73□□□□□ -0.53
DDX54-209ENST00000551912 C7orf33Q8WU49 177 aa11.73□□□□□ -0.53
DDX54-209ENST00000551912 ERG28Q9UKR5 140 aa11.73□□□□□ -0.53
DDX54-209ENST00000551912 FAM168BA1KXE4 195 aa11.72□□□□□ -0.53
DDX54-209ENST00000551912 COX17Q14061 63 aa11.72□□□□□ -0.53
DDX54-209ENST00000551912 XAGE1AQ9HD64 81 aa11.72□□□□□ -0.53
DDX54-209ENST00000551912 NDUFA12Q9UI09 145 aa11.72□□□□□ -0.53
DDX54-209ENST00000551912 VPS13BQ7Z7G8 4022 aa11.71□□□□□ -0.53
DDX54-209ENST00000551912 J3QQQ9 107 aa11.71□□□□□ -0.53
DDX54-209ENST00000551912 TSPEAR-AS2P59090 65 aa11.71□□□□□ -0.53
DDX54-209ENST00000551912 MYMXA0A1B0GTQ4 84 aa11.7□□□□□ -0.54
DDX54-209ENST00000551912 C5orf52A6NGY3 159 aa11.7□□□□□ -0.54
DDX54-209ENST00000551912 E9PLD3 99 aa11.7□□□□□ -0.54
DDX54-209ENST00000551912 RPL37AP61513 92 aaKnown RBP11.7□□□□□ -0.54
DDX54-209ENST00000551912 HERV-K104P63124 156 aa11.7□□□□□ -0.54
DDX54-209ENST00000551912 FAM19A5Q7Z5A7 132 aaPredicted RBP11.7□□□□□ -0.54
DDX54-209ENST00000551912 LGALS3P17931 250 aaKnown RBP11.69□□□□□ -0.54
DDX54-209ENST00000551912 NMUP48645 174 aa11.68□□□□□ -0.54
DDX54-209ENST00000551912 AKR1D1P51857 326 aa11.68□□□□□ -0.54
DDX54-209ENST00000551912 SRRM2Q9UQ35 2752 aaKnown RBP11.67□□□□□ -0.54
DDX54-209ENST00000551912 LINC00158P58513 81 aa11.67□□□□□ -0.54
DDX54-209ENST00000551912 KRTAP7-1Q8IUC3 87 aa11.67□□□□□ -0.54
DDX54-209ENST00000551912 LINC00587B1AMM8 73 aa11.66□□□□□ -0.54
DDX54-209ENST00000551912 MEIG1Q5JSS6 88 aa11.66□□□□□ -0.54
DDX54-209ENST00000551912 PHF5AQ7RTV0 110 aaKnown RBP11.66□□□□□ -0.54
DDX54-209ENST00000551912 ABCA13Q86UQ4 5058 aa11.66□□□□□ -0.54
DDX54-209ENST00000551912 M0QXV9 152 aa11.65□□□□□ -0.54
DDX54-209ENST00000551912 SERTAD4-AS1Q5TG53 156 aa11.65□□□□□ -0.54
DDX54-209ENST00000551912 SND1-IT1Q9HBX3 110 aa11.65□□□□□ -0.54
DDX54-209ENST00000551912 A0A0U1RRA0 63 aa11.64□□□□□ -0.55
DDX54-209ENST00000551912 SMIM13P0DJ93 91 aa11.64□□□□□ -0.55
DDX54-209ENST00000551912 KRTAP10-4P60372 401 aaPredicted RBP11.64□□□□□ -0.55
DDX54-209ENST00000551912 ATOH7Q8N100 152 aa11.63□□□□□ -0.55
DDX54-209ENST00000551912 PLA2G2DQ9UNK4 145 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms