RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 FAM74A3Q4VXF1 159 aa4.02□□□□□ -1.77
PRPF40B-214ENST00000551320 FAM210AQ96ND0 272 aa4.02□□□□□ -1.77
PRPF40B-214ENST00000551320 TIMM21Q9BVV7 248 aa4.02□□□□□ -1.77
PRPF40B-214ENST00000551320 NAT8BQ9UHF3 227 aa4.02□□□□□ -1.77
PRPF40B-214ENST00000551320 PKIGQ9Y2B9 76 aa4.02□□□□□ -1.77
PRPF40B-214ENST00000551320 C22orf24Q9Y442 160 aa4.02□□□□□ -1.77
PRPF40B-214ENST00000551320 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
PRPF40B-214ENST00000551320 IGLV1-50A0A075B6I6 118 aa4.01□□□□□ -1.77
PRPF40B-214ENST00000551320 TGIF2-C20orf24A0A0A6YYL0 155 aa4.01□□□□□ -1.77
PRPF40B-214ENST00000551320 A0A1B0GVG6 124 aa4.01□□□□□ -1.77
PRPF40B-214ENST00000551320 TLX1NBP0CAT3 122 aa4.01□□□□□ -1.77
PRPF40B-214ENST00000551320 LINC00173Q6ZV60 143 aa4.01□□□□□ -1.77
PRPF40B-214ENST00000551320 TRBV24-1A0A075B6N3 115 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 A0A1B0GXF2 115 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 NDUFC2-KCTD14E9PQ53 114 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 PPP1R2P9O14990 202 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 ZNF861PO60384 105 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 IGKV2-30P06310 120 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 MRPS36P82909 103 aaKnown RBP4□□□□□ -1.77
PRPF40B-214ENST00000551320 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 AKAP14Q86UN6 197 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 PRELID3AQ96N28 172 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 C20orf78Q9BR46 151 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 SPANXA1Q9NS26 97 aa4□□□□□ -1.77
PRPF40B-214ENST00000551320 RAB5BP61020 215 aa3.99□□□□□ -1.77
PRPF40B-214ENST00000551320 TMEM136Q6ZRR5 245 aa3.99□□□□□ -1.77
PRPF40B-214ENST00000551320 TMEM141Q96I45 108 aa3.99□□□□□ -1.77
PRPF40B-214ENST00000551320 PACRGQ96M98 296 aaPredicted RBP3.99□□□□□ -1.77
PRPF40B-214ENST00000551320 LINC00862A6NCI5 91 aa3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 PPP1R17O96001 155 aa3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 RAB5AP20339 215 aa3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 IFI27P40305 119 aaPredicted RBP3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 SMAGPQ0VAQ4 97 aa3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 C6orf226Q5I0X4 101 aa3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 TYMSOSQ8TAI1 123 aa3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 LINC00167Q96N53 147 aa3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 ALKBH7Q9BT30 221 aaPredicted RBP3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 CDKN2A-AS1Q9UH64 79 aa3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 NAT8Q9UHE5 227 aa3.98□□□□□ -1.77
PRPF40B-214ENST00000551320 TRBV30A0A0K0K1B3 111 aa3.97□□□□□ -1.77
PRPF40B-214ENST00000551320 SCGB1D1O95968 90 aa3.97□□□□□ -1.77
PRPF40B-214ENST00000551320 PRSS2P07478 247 aa3.97□□□□□ -1.77
PRPF40B-214ENST00000551320 ADCYAP1P18509 176 aa3.97□□□□□ -1.77
PRPF40B-214ENST00000551320 CKS1BP61024 79 aa3.97□□□□□ -1.77
PRPF40B-214ENST00000551320 RPL32P62910 135 aaKnown RBP3.97□□□□□ -1.77
PRPF40B-214ENST00000551320 C2orf66Q6UXQ4 117 aa3.97□□□□□ -1.77
PRPF40B-214ENST00000551320 TEX43Q6ZNM6 134 aa3.97□□□□□ -1.77
PRPF40B-214ENST00000551320 ORMDL3Q8N138 153 aa3.97□□□□□ -1.77
PRPF40B-214ENST00000551320 IGKV2-28A0A075B6P5 120 aa3.96□□□□□ -1.78
PRPF40B-214ENST00000551320 IGKV2D-28P01615 120 aa3.96□□□□□ -1.78
PRPF40B-214ENST00000551320 RPL13AP40429 203 aaKnown RBP3.96□□□□□ -1.78
PRPF40B-214ENST00000551320 KIAA1644Q3SXP7 199 aa3.96□□□□□ -1.78
PRPF40B-214ENST00000551320 MRPL55Q7Z7F7 128 aaKnown RBP3.96□□□□□ -1.78
PRPF40B-214ENST00000551320 C3orf22Q8N5N4 141 aa3.96□□□□□ -1.78
PRPF40B-214ENST00000551320 VCX2Q9H322 139 aa3.96□□□□□ -1.78
PRPF40B-214ENST00000551320 PAM16Q9Y3D7 125 aa3.96□□□□□ -1.78
PRPF40B-214ENST00000551320 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 IGIPA6NJ69 53 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 TMEM238C9JI98 176 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 F8W036 122 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 F8WDY8 70 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 BCE1O60756 84 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 SPINK8P0C7L1 97 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 PRLHP81277 87 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 Q6ZN92 141 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 Q8NDZ9 215 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 AMELXQ99217 191 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 CYSLTR1Q9Y271 337 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 CARHSP1Q9Y2V2 147 aaKnown RBP3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 PYGO1Q9Y3Y4 419 aa3.95□□□□□ -1.78
PRPF40B-214ENST00000551320 CRYGAP11844 174 aa3.94□□□□□ -1.78
PRPF40B-214ENST00000551320 UBE2AP49459 152 aa3.94□□□□□ -1.78
PRPF40B-214ENST00000551320 Q8N8P6 123 aa3.94□□□□□ -1.78
PRPF40B-214ENST00000551320 MAP1LC3AQ9H492 121 aa3.94□□□□□ -1.78
PRPF40B-214ENST00000551320 IGLV7-46A0A075B6I9 117 aa3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 A0A1B0GW15 77 aa3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 SMIM1B2RUZ4 78 aa3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 F8VRH5 84 aa3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 PFN2P35080 140 aa3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 RPL28P46779 137 aaKnown RBP3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 PNRC1Q12796 327 aaPredicted RBP3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 PEA15Q15121 130 aa3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 LBHQ53QV2 105 aaPredicted RBP3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 KRTAP13-1Q8IUC0 172 aa3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 Q8IZM0 81 aa3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 Q8N9P0 234 aaPredicted RBP3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 LINC00304Q8N9R0 145 aa3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 C2orf88Q9BSF0 95 aa3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 GEMIN7Q9H840 131 aaKnown RBP3.93□□□□□ -1.78
PRPF40B-214ENST00000551320 NUPR1O60356 82 aa3.92□□□□□ -1.78
PRPF40B-214ENST00000551320 PPBPP02775 128 aa3.92□□□□□ -1.78
PRPF40B-214ENST00000551320 COX7B2Q8TF08 81 aa3.92□□□□□ -1.78
PRPF40B-214ENST00000551320 ZNF625Q96I27 306 aaPredicted RBP3.92□□□□□ -1.78
PRPF40B-214ENST00000551320 A0A0U1RQV1 116 aa3.91□□□□□ -1.78
PRPF40B-214ENST00000551320 S100A8P05109 93 aa3.91□□□□□ -1.78
PRPF40B-214ENST00000551320 FAM19A1Q7Z5A9 133 aa3.91□□□□□ -1.78
PRPF40B-214ENST00000551320 DAND5Q8N907 189 aa3.91□□□□□ -1.78
PRPF40B-214ENST00000551320 A0A0U1RRA0 63 aa3.9□□□□□ -1.79
PRPF40B-214ENST00000551320 PRSS47A8MTI9 375 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms