RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CTDSP1Q9GZU7 261 aa6.82□□□□□ -1.32
PRPF40B-212ENST00000551111 ANAPC11Q9NYG5 84 aa6.82□□□□□ -1.32
PRPF40B-212ENST00000551111 PRSS2P07478 247 aa6.81□□□□□ -1.32
PRPF40B-212ENST00000551111 CKS1BP61024 79 aa6.81□□□□□ -1.32
PRPF40B-212ENST00000551111 RPL37AP8A6NKH3 93 aa6.8□□□□□ -1.32
PRPF40B-212ENST00000551111 RPL13AP40429 203 aaKnown RBP6.8□□□□□ -1.32
PRPF40B-212ENST00000551111 KIAA1644Q3SXP7 199 aa6.8□□□□□ -1.32
PRPF40B-212ENST00000551111 LAMTOR2Q9Y2Q5 125 aa6.8□□□□□ -1.32
PRPF40B-212ENST00000551111 CARHSP1Q9Y2V2 147 aaKnown RBP6.8□□□□□ -1.32
PRPF40B-212ENST00000551111 ADCYAP1P18509 176 aa6.79□□□□□ -1.32
PRPF40B-212ENST00000551111 ORMDL2Q53FV1 153 aa6.79□□□□□ -1.32
PRPF40B-212ENST00000551111 MRPL55Q7Z7F7 128 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-212ENST00000551111 LINC00167Q96N53 147 aa6.79□□□□□ -1.32
PRPF40B-212ENST00000551111 GAGE10A6NGK3 116 aa6.78□□□□□ -1.32
PRPF40B-212ENST00000551111 SMIM1B2RUZ4 78 aa6.78□□□□□ -1.32
PRPF40B-212ENST00000551111 F8VRH5 84 aa6.78□□□□□ -1.32
PRPF40B-212ENST00000551111 SCO1O75880 301 aa6.78□□□□□ -1.32
PRPF40B-212ENST00000551111 NUPR1O60356 82 aa6.77□□□□□ -1.33
PRPF40B-212ENST00000551111 BCE1O60756 84 aa6.77□□□□□ -1.33
PRPF40B-212ENST00000551111 HERVK_113P63121 156 aa6.77□□□□□ -1.33
PRPF40B-212ENST00000551111 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
PRPF40B-212ENST00000551111 TOMM6Q96B49 74 aa6.77□□□□□ -1.33
PRPF40B-212ENST00000551111 ANAPC16Q96DE5 110 aa6.77□□□□□ -1.33
PRPF40B-212ENST00000551111 GEMIN7Q9H840 131 aaKnown RBP6.77□□□□□ -1.33
PRPF40B-212ENST00000551111 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
PRPF40B-212ENST00000551111 MT-ND4LP03901 98 aa6.76□□□□□ -1.33
PRPF40B-212ENST00000551111 NPSP0C0P6 89 aa6.76□□□□□ -1.33
PRPF40B-212ENST00000551111 RAB5BP61020 215 aa6.76□□□□□ -1.33
PRPF40B-212ENST00000551111 LBHQ53QV2 105 aaPredicted RBP6.76□□□□□ -1.33
PRPF40B-212ENST00000551111 TIMM17AQ99595 171 aa6.76□□□□□ -1.33
PRPF40B-212ENST00000551111 NXT2Q9NPJ8 142 aaKnown RBP6.76□□□□□ -1.33
PRPF40B-212ENST00000551111 TP73-AS1Q9UF72 201 aa6.76□□□□□ -1.33
PRPF40B-212ENST00000551111 SPINK8P0C7L1 97 aa6.75□□□□□ -1.33
PRPF40B-212ENST00000551111 PNRC1Q12796 327 aaPredicted RBP6.75□□□□□ -1.33
PRPF40B-212ENST00000551111 KRTAP13-1Q8IUC0 172 aa6.75□□□□□ -1.33
PRPF40B-212ENST00000551111 RETNLBQ9BQ08 111 aa6.75□□□□□ -1.33
PRPF40B-212ENST00000551111 K7EMI3 77 aa6.74□□□□□ -1.33
PRPF40B-212ENST00000551111 RPL28P46779 137 aaKnown RBP6.74□□□□□ -1.33
PRPF40B-212ENST00000551111 ERASQ7Z444 233 aa6.74□□□□□ -1.33
PRPF40B-212ENST00000551111 TYMSOSQ8TAI1 123 aa6.74□□□□□ -1.33
PRPF40B-212ENST00000551111 COX7B2Q8TF08 81 aa6.74□□□□□ -1.33
PRPF40B-212ENST00000551111 SCGB3A1Q96QR1 104 aa6.74□□□□□ -1.33
PRPF40B-212ENST00000551111 MUC17Q685J3 4493 aa6.74□□□□□ -1.33
PRPF40B-212ENST00000551111 IGLV5-45A0A087WSX0 123 aa6.73□□□□□ -1.33
PRPF40B-212ENST00000551111 TINCRA0A1B0GVN0 87 aa6.73□□□□□ -1.33
PRPF40B-212ENST00000551111 CRYGAP11844 174 aa6.73□□□□□ -1.33
PRPF40B-212ENST00000551111 SEC11AP67812 179 aa6.73□□□□□ -1.33
PRPF40B-212ENST00000551111 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
PRPF40B-212ENST00000551111 PDZD11Q5EBL8 140 aa6.72□□□□□ -1.33
PRPF40B-212ENST00000551111 PAPPA-AS1Q5QFB9 102 aa6.72□□□□□ -1.33
PRPF40B-212ENST00000551111 KRTAP9-2Q9BYQ4 174 aa6.72□□□□□ -1.33
PRPF40B-212ENST00000551111 CST9LQ9H4G1 147 aa6.72□□□□□ -1.33
PRPF40B-212ENST00000551111 IGLV5-37A0A075B6J1 123 aa6.71□□□□□ -1.34
PRPF40B-212ENST00000551111 IGKV2-28A0A075B6P5 120 aa6.71□□□□□ -1.34
PRPF40B-212ENST00000551111 IGKV2D-28P01615 120 aa6.71□□□□□ -1.34
PRPF40B-212ENST00000551111 CXCL5P42830 114 aa6.71□□□□□ -1.34
PRPF40B-212ENST00000551111 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
PRPF40B-212ENST00000551111 Q8NDZ9 215 aa6.71□□□□□ -1.34
PRPF40B-212ENST00000551111 LINC01546A6NGU7 62 aa6.7□□□□□ -1.34
PRPF40B-212ENST00000551111 TMEM238C9JI98 176 aa6.69□□□□□ -1.34
PRPF40B-212ENST00000551111 PRLHP81277 87 aa6.69□□□□□ -1.34
PRPF40B-212ENST00000551111 G0S2P27469 103 aa6.68□□□□□ -1.34
PRPF40B-212ENST00000551111 PFN2P35080 140 aa6.68□□□□□ -1.34
PRPF40B-212ENST00000551111 UBE2AP49459 152 aa6.68□□□□□ -1.34
PRPF40B-212ENST00000551111 NKAPP1Q8N9T2 125 aa6.68□□□□□ -1.34
PRPF40B-212ENST00000551111 A0A096LNJ9 63 aa6.67□□□□□ -1.34
PRPF40B-212ENST00000551111 VPREB1P12018 145 aa6.67□□□□□ -1.34
PRPF40B-212ENST00000551111 PMVKQ15126 192 aa6.67□□□□□ -1.34
PRPF40B-212ENST00000551111 IGLV5-39A0A0G2JS06 123 aa6.66□□□□□ -1.34
PRPF40B-212ENST00000551111 C3orf22Q8N5N4 141 aa6.66□□□□□ -1.34
PRPF40B-212ENST00000551111 LINC00304Q8N9R0 145 aa6.66□□□□□ -1.34
PRPF40B-212ENST00000551111 URB1-AS1Q96HZ7 61 aa6.66□□□□□ -1.34
PRPF40B-212ENST00000551111 SND1-IT1Q9HBX3 110 aa6.66□□□□□ -1.34
PRPF40B-212ENST00000551111 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
PRPF40B-212ENST00000551111 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-212ENST00000551111 RAB14P61106 215 aa6.65□□□□□ -1.34
PRPF40B-212ENST00000551111 FAM229BQ4G0N7 80 aa6.65□□□□□ -1.34
PRPF40B-212ENST00000551111 CLLU1Q5K131 121 aa6.65□□□□□ -1.34
PRPF40B-212ENST00000551111 FAM19A1Q7Z5A9 133 aa6.65□□□□□ -1.34
PRPF40B-212ENST00000551111 ZNF625Q96I27 306 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-212ENST00000551111 GNB1LQ9BYB4 327 aa6.65□□□□□ -1.34
PRPF40B-212ENST00000551111 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.34
PRPF40B-212ENST00000551111 TMEM126AQ9H061 195 aa6.65□□□□□ -1.34
PRPF40B-212ENST00000551111 TMEM218A2RU14 115 aa6.64□□□□□ -1.35
PRPF40B-212ENST00000551111 M0R378 163 aa6.64□□□□□ -1.35
PRPF40B-212ENST00000551111 IGLC3P0DOY3 106 aa6.64□□□□□ -1.35
PRPF40B-212ENST00000551111 TRAV9-1A0A075B6T8 112 aa6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 A0A0U1RQV1 116 aa6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 ATP5LO75964 103 aa6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 NDUFA6P56556 154 aa6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 IFITM2Q01629 132 aa6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 FABP9Q0Z7S8 132 aa6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 PMCHL1Q16048 86 aa6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 FA2HQ7L5A8 372 aa6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 PLEKHB2Q96CS7 222 aa6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 MRPL18Q9H0U6 180 aaKnown RBP6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 ERG28Q9UKR5 140 aa6.63□□□□□ -1.35
PRPF40B-212ENST00000551111 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
PRPF40B-212ENST00000551111 IGKV2D-26A0A0A0MRZ7 120 aa6.62□□□□□ -1.35
PRPF40B-212ENST00000551111 H3BRM9 83 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms