RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 KMT2AQ03164 3969 aa11.45□□□□□ -0.58
LETMD1-220ENST00000549686 LRCOL1A6NCL2 159 aa11.44□□□□□ -0.58
LETMD1-220ENST00000549686 MIEN1Q9BRT3 115 aa11.44□□□□□ -0.58
LETMD1-220ENST00000549686 TTTY13Q9BZ97 58 aa11.44□□□□□ -0.58
LETMD1-220ENST00000549686 SCGB1D4Q6XE38 83 aa11.43□□□□□ -0.58
LETMD1-220ENST00000549686 CAMK2N2Q96S95 79 aa11.43□□□□□ -0.58
LETMD1-220ENST00000549686 PRO1933Q9H354 126 aa11.43□□□□□ -0.58
LETMD1-220ENST00000549686 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
LETMD1-220ENST00000549686 CIRBPQ14011 172 aaKnown RBP11.42□□□□□ -0.58
LETMD1-220ENST00000549686 A0A0J9YXY3 114 aa11.41□□□□□ -0.58
LETMD1-220ENST00000549686 TRBV30A0A0K0K1B3 111 aa11.41□□□□□ -0.58
LETMD1-220ENST00000549686 LECT2O14960 151 aa11.41□□□□□ -0.58
LETMD1-220ENST00000549686 TIMM17BO60830 172 aa11.41□□□□□ -0.58
LETMD1-220ENST00000549686 C2orf82Q6UX34 121 aa11.41□□□□□ -0.58
LETMD1-220ENST00000549686 A0A087WTM6 91 aa11.4□□□□□ -0.58
LETMD1-220ENST00000549686 SYCNQ0VAF6 134 aa11.4□□□□□ -0.58
LETMD1-220ENST00000549686 WFDC2Q14508 124 aa11.4□□□□□ -0.58
LETMD1-220ENST00000549686 HIGD1BQ9P298 99 aa11.4□□□□□ -0.58
LETMD1-220ENST00000549686 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.39□□□□□ -0.59
LETMD1-220ENST00000549686 EREGO14944 169 aa11.39□□□□□ -0.59
LETMD1-220ENST00000549686 CNBPP62633 177 aaKnown RBP11.39□□□□□ -0.59
LETMD1-220ENST00000549686 COX17Q14061 63 aa11.39□□□□□ -0.59
LETMD1-220ENST00000549686 RNF151Q2KHN1 245 aa11.39□□□□□ -0.59
LETMD1-220ENST00000549686 MEIG1Q5JSS6 88 aa11.39□□□□□ -0.59
LETMD1-220ENST00000549686 UNQ6190/PRO20217Q6UXQ8 127 aa11.39□□□□□ -0.59
LETMD1-220ENST00000549686 LINC00526Q96FQ7 95 aa11.39□□□□□ -0.59
LETMD1-220ENST00000549686 TMEM238C9JI98 176 aa11.38□□□□□ -0.59
LETMD1-220ENST00000549686 CARD19Q96LW7 228 aa11.38□□□□□ -0.59
LETMD1-220ENST00000549686 ERG28Q9UKR5 140 aa11.38□□□□□ -0.59
LETMD1-220ENST00000549686 HNRNPA3P51991 378 aaKnown RBP11.37□□□□□ -0.59
LETMD1-220ENST00000549686 Q6ZRU5 148 aa11.37□□□□□ -0.59
LETMD1-220ENST00000549686 Q8N814 137 aa11.37□□□□□ -0.59
LETMD1-220ENST00000549686 RTL8CO15255 209 aa11.36□□□□□ -0.59
LETMD1-220ENST00000549686 GCSHP23434 173 aa11.36□□□□□ -0.59
LETMD1-220ENST00000549686 C10orf25Q5T742 122 aa11.36□□□□□ -0.59
LETMD1-220ENST00000549686 C2orf91Q6ZV80 131 aa11.36□□□□□ -0.59
LETMD1-220ENST00000549686 Q6ZVH6 145 aa11.36□□□□□ -0.59
LETMD1-220ENST00000549686 C6orf48Q9UBA6 75 aa11.36□□□□□ -0.59
LETMD1-220ENST00000549686 DNAH10Q8IVF4 4471 aa11.35□□□□□ -0.59
LETMD1-220ENST00000549686 SPANXB1Q9NS25 103 aaPredicted RBP11.35□□□□□ -0.59
LETMD1-220ENST00000549686 PKIGQ9Y2B9 76 aa11.35□□□□□ -0.59
LETMD1-220ENST00000549686 DNAH2Q9P225 4427 aa11.34□□□□□ -0.59
LETMD1-220ENST00000549686 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
LETMD1-220ENST00000549686 HYDINQ4G0P3 5121 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 SLPIP03973 132 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 SMIM13P0DJ93 91 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 DDTP30046 118 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 LINC00158P58513 81 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 TAL2Q16559 108 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 LINC00336Q6ZUF6 198 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 COPS9Q8WXC6 57 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 LITAFQ99732 161 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 SPANXDQ9BXN6 97 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 SPANXCQ9NY87 97 aa11.33□□□□□ -0.6
LETMD1-220ENST00000549686 TNP2Q05952 138 aa11.32□□□□□ -0.6
LETMD1-220ENST00000549686 DNAH17Q9UFH2 4485 aa11.31□□□□□ -0.6
LETMD1-220ENST00000549686 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-220ENST00000549686 TLX1NBP0CAT3 122 aa11.31□□□□□ -0.6
LETMD1-220ENST00000549686 PFN2P35080 140 aa11.31□□□□□ -0.6
LETMD1-220ENST00000549686 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
LETMD1-220ENST00000549686 NDUFC2-KCTD14E9PQ53 114 aa11.3□□□□□ -0.6
LETMD1-220ENST00000549686 IFITM1P13164 125 aa11.3□□□□□ -0.6
LETMD1-220ENST00000549686 HSD52Q0P140 79 aa11.3□□□□□ -0.6
LETMD1-220ENST00000549686 HIST1H4GQ99525 98 aa11.3□□□□□ -0.6
LETMD1-220ENST00000549686 PPDPFQ9H3Y8 114 aa11.3□□□□□ -0.6
LETMD1-220ENST00000549686 RYR2Q92736 4967 aa11.3□□□□□ -0.6
LETMD1-220ENST00000549686 PTTG1IPP53801 180 aa11.29□□□□□ -0.6
LETMD1-220ENST00000549686 C9orf116Q5BN46 136 aaPredicted RBP11.29□□□□□ -0.6
LETMD1-220ENST00000549686 ADAMTSL4-AS1Q5T5F5 129 aa11.29□□□□□ -0.6
LETMD1-220ENST00000549686 MIR7-3HGQ8N6C7 128 aa11.29□□□□□ -0.6
LETMD1-220ENST00000549686 C9orf163Q8N9P6 203 aa11.28□□□□□ -0.6
LETMD1-220ENST00000549686 A0A0U1RRA0 63 aa11.27□□□□□ -0.61
LETMD1-220ENST00000549686 LOC107984640A0A0U1RRK4 108 aa11.27□□□□□ -0.61
LETMD1-220ENST00000549686 KMT2CQ8NEZ4 4911 aaKnown RBP11.27□□□□□ -0.61
LETMD1-220ENST00000549686 CTAG1AP78358 180 aa11.26□□□□□ -0.61
LETMD1-220ENST00000549686 LINC00308Q8TCZ7 52 aa11.25□□□□□ -0.61
LETMD1-220ENST00000549686 PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
LETMD1-220ENST00000549686 IGLV5-52A0A0A0MRZ9 124 aa11.24□□□□□ -0.61
LETMD1-220ENST00000549686 LOC107984156A0A0G2JMH3 177 aa11.24□□□□□ -0.61
LETMD1-220ENST00000549686 M0R143 59 aa11.24□□□□□ -0.61
LETMD1-220ENST00000549686 RPL24P83731 157 aaKnown RBP11.24□□□□□ -0.61
LETMD1-220ENST00000549686 ARL17AQ8IVW1 177 aa11.24□□□□□ -0.61
LETMD1-220ENST00000549686 DAND5Q8N907 189 aa11.24□□□□□ -0.61
LETMD1-220ENST00000549686 SND1-IT1Q9HBX3 110 aa11.24□□□□□ -0.61
LETMD1-220ENST00000549686 FRAS1Q86XX4 4008 aa11.23□□□□□ -0.61
LETMD1-220ENST00000549686 PCP4L1A6NKN8 68 aa11.23□□□□□ -0.61
LETMD1-220ENST00000549686 RPL18AQ02543 176 aaKnown RBP11.23□□□□□ -0.61
LETMD1-220ENST00000549686 CEND1Q8N111 149 aa11.23□□□□□ -0.61
LETMD1-220ENST00000549686 TMEM238LA0A1B0GVL6 79 aa11.22□□□□□ -0.61
LETMD1-220ENST00000549686 A6NJY4 79 aa11.22□□□□□ -0.61
LETMD1-220ENST00000549686 Q6ZRP5 223 aa11.22□□□□□ -0.61
LETMD1-220ENST00000549686 MUSTN1Q8IVN3 82 aa11.22□□□□□ -0.61
LETMD1-220ENST00000549686 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
LETMD1-220ENST00000549686 GAGE2EQ4V326 116 aa11.2□□□□□ -0.62
LETMD1-220ENST00000549686 LINC00474Q9P2X8 69 aa11.2□□□□□ -0.62
LETMD1-220ENST00000549686 GAGE2DQ9UEU5 116 aa11.2□□□□□ -0.62
LETMD1-220ENST00000549686 SOSTDC1Q6X4U4 206 aa11.19□□□□□ -0.62
LETMD1-220ENST00000549686 SDIM1Q6ZPB5 146 aa11.19□□□□□ -0.62
LETMD1-220ENST00000549686 NPC2P61916 151 aa11.18□□□□□ -0.62
LETMD1-220ENST00000549686 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms