RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 NRXN1Q9ULB1 1477 aa0.43□□□□□ -2.34
SNRPF-202ENST00000549580 A0A1B0GU69 56 aa0.43□□□□□ -2.34
SNRPF-202ENST00000549580 H0Y9P7 68 aa0.43□□□□□ -2.34
SNRPF-202ENST00000549580 COX6B1P14854 86 aa0.43□□□□□ -2.34
SNRPF-202ENST00000549580 GNGT1P63211 74 aa0.43□□□□□ -2.34
SNRPF-202ENST00000549580 C6orf201Q7Z4U5 140 aa0.43□□□□□ -2.34
SNRPF-202ENST00000549580 V9GYS6 101 aa0.43□□□□□ -2.34
SNRPF-202ENST00000549580 GOLGA4Q13439 2230 aaKnown RBP0.43□□□□□ -2.34
SNRPF-202ENST00000549580 C2CD3Q4AC94 2353 aa0.43□□□□□ -2.34
SNRPF-202ENST00000549580 BAZ1AQ9NRL2 1556 aaPredicted RBP0.43□□□□□ -2.34
SNRPF-202ENST00000549580 ANK2Q01484 3957 aa0.43□□□□□ -2.34
SNRPF-202ENST00000549580 EPRSP07814 1512 aaKnown RBP0.43□□□□□ -2.34
SNRPF-202ENST00000549580 TTC37Q6PGP7 1564 aa0.42□□□□□ -2.34
SNRPF-202ENST00000549580 DEFB109BQ30KR1 87 aa0.42□□□□□ -2.34
SNRPF-202ENST00000549580 ALKAL2Q6UX46 152 aa0.42□□□□□ -2.34
SNRPF-202ENST00000549580 PTPRZ1P23471 2315 aaPredicted RBP0.42□□□□□ -2.34
SNRPF-202ENST00000549580 SPRR1AP35321 89 aa0.41□□□□□ -2.34
SNRPF-202ENST00000549580 USMG5Q96IX5 58 aa0.41□□□□□ -2.34
SNRPF-202ENST00000549580 FANCAO15360 1455 aa0.41□□□□□ -2.34
SNRPF-202ENST00000549580 PPRC1Q5VV67 1664 aaKnown RBP0.4□□□□□ -2.34
SNRPF-202ENST00000549580 USF3Q68DE3 2245 aa0.4□□□□□ -2.35
SNRPF-202ENST00000549580 F8WEM9 126 aa0.4□□□□□ -2.35
SNRPF-202ENST00000549580 LEPROTL1O95214 131 aa0.4□□□□□ -2.35
SNRPF-202ENST00000549580 SMIM11AP58511 58 aa0.4□□□□□ -2.35
SNRPF-202ENST00000549580 PSENENQ9NZ42 101 aa0.4□□□□□ -2.35
SNRPF-202ENST00000549580 ATP10BO94823 1461 aa0.4□□□□□ -2.35
SNRPF-202ENST00000549580 KMT2DO14686 5537 aa0.4□□□□□ -2.35
SNRPF-202ENST00000549580 SHPRHQ149N8 1683 aa0.4□□□□□ -2.35
SNRPF-202ENST00000549580 TARBP1Q13395 1621 aaKnown RBP0.39□□□□□ -2.35
SNRPF-202ENST00000549580 IGF2RP11717 2491 aa0.39□□□□□ -2.35
SNRPF-202ENST00000549580 D6R8Y8 96 aa0.39□□□□□ -2.35
SNRPF-202ENST00000549580 K7EQZ3 153 aa0.39□□□□□ -2.35
SNRPF-202ENST00000549580 MUSTN1Q8IVN3 82 aa0.39□□□□□ -2.35
SNRPF-202ENST00000549580 C20orf78Q9BR46 151 aa0.39□□□□□ -2.35
SNRPF-202ENST00000549580 HIGD1BQ9P298 99 aa0.39□□□□□ -2.35
SNRPF-202ENST00000549580 PAPPA2Q9BXP8 1791 aa0.39□□□□□ -2.35
SNRPF-202ENST00000549580 ZFYVE26Q68DK2 2539 aa0.38□□□□□ -2.35
SNRPF-202ENST00000549580 SMARCA2P51531 1590 aa0.38□□□□□ -2.35
SNRPF-202ENST00000549580 IQSEC2Q5JU85 1478 aa0.38□□□□□ -2.35
SNRPF-202ENST00000549580 CCDC141Q6ZP82 1450 aa0.38□□□□□ -2.35
SNRPF-202ENST00000549580 EDC4Q6P2E9 1401 aaKnown RBP0.38□□□□□ -2.35
SNRPF-202ENST00000549580 COX8AP10176 69 aa0.37□□□□□ -2.35
SNRPF-202ENST00000549580 PEA15Q15121 130 aa0.37□□□□□ -2.35
SNRPF-202ENST00000549580 PYY3Q5JQD4 70 aa0.37□□□□□ -2.35
SNRPF-202ENST00000549580 MON2Q7Z3U7 1717 aa0.37□□□□□ -2.35
SNRPF-202ENST00000549580 DNAJC13O75165 2243 aa0.37□□□□□ -2.35
SNRPF-202ENST00000549580 SPRR1BP22528 89 aa0.36□□□□□ -2.35
SNRPF-202ENST00000549580 CUX1P39880 1505 aa0.36□□□□□ -2.35
SNRPF-202ENST00000549580 C5P01031 1676 aa0.36□□□□□ -2.35
SNRPF-202ENST00000549580 MYH4Q9Y623 1939 aa0.36□□□□□ -2.35
SNRPF-202ENST00000549580 TSC2P49815 1807 aa0.36□□□□□ -2.35
SNRPF-202ENST00000549580 KIAA0556O60303 1618 aa0.35□□□□□ -2.35
SNRPF-202ENST00000549580 DOPEY2Q9Y3R5 2298 aa0.35□□□□□ -2.35
SNRPF-202ENST00000549580 PVALEFA0A1B0GWK0 134 aa0.35□□□□□ -2.35
SNRPF-202ENST00000549580 GNG2P59768 71 aa0.35□□□□□ -2.35
SNRPF-202ENST00000549580 FAT4Q6V0I7 4981 aa0.35□□□□□ -2.35
SNRPF-202ENST00000549580 RGPD4Q7Z3J3 1758 aa0.34□□□□□ -2.35
SNRPF-202ENST00000549580 CEP162Q5TB80 1403 aa0.34□□□□□ -2.36
SNRPF-202ENST00000549580 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.36
SNRPF-202ENST00000549580 ANKRD36A6QL64 1941 aa0.34□□□□□ -2.36
SNRPF-202ENST00000549580 ZNF292O60281 2723 aa0.33□□□□□ -2.36
SNRPF-202ENST00000549580 PKDREJQ9NTG1 2253 aa0.33□□□□□ -2.36
SNRPF-202ENST00000549580 K7EP34 96 aa0.33□□□□□ -2.36
SNRPF-202ENST00000549580 HMGN2P05204 90 aaKnown RBP0.33□□□□□ -2.36
SNRPF-202ENST00000549580 CRIPTQ9P021 101 aa0.33□□□□□ -2.36
SNRPF-202ENST00000549580 PTPRQQ9UMZ3 2332 aa0.33□□□□□ -2.36
SNRPF-202ENST00000549580 ABCC3O15438 1527 aa0.33□□□□□ -2.36
SNRPF-202ENST00000549580 CRYBG1Q9Y4K1 1723 aa0.33□□□□□ -2.36
SNRPF-202ENST00000549580 ZFHX3Q15911 3703 aa0.33□□□□□ -2.36
SNRPF-202ENST00000549580 MYO3AQ8NEV4 1616 aa0.32□□□□□ -2.36
SNRPF-202ENST00000549580 LRP1Q07954 4544 aaKnown RBP0.32□□□□□ -2.36
SNRPF-202ENST00000549580 AKAP6Q13023 2319 aa0.32□□□□□ -2.36
SNRPF-202ENST00000549580 LRRC37AA6NMS7 1700 aa0.32□□□□□ -2.36
SNRPF-202ENST00000549580 KIAA1551Q9HCM1 1747 aa0.32□□□□□ -2.36
SNRPF-202ENST00000549580 SAMD9Q5K651 1589 aa0.32□□□□□ -2.36
SNRPF-202ENST00000549580 PLIN4Q96Q06 1357 aa0.32□□□□□ -2.36
SNRPF-202ENST00000549580 IGLC2P0DOY2 106 aa0.31□□□□□ -2.36
SNRPF-202ENST00000549580 IGLC3P0DOY3 106 aa0.31□□□□□ -2.36
SNRPF-202ENST00000549580 S100A16Q96FQ6 103 aaKnown RBP0.31□□□□□ -2.36
SNRPF-202ENST00000549580 FXYD6Q9H0Q3 95 aa0.31□□□□□ -2.36
SNRPF-202ENST00000549580 UBE2D4Q9Y2X8 147 aa0.31□□□□□ -2.36
SNRPF-202ENST00000549580 RGPD3A6NKT7 1758 aaPredicted RBP0.31□□□□□ -2.36
SNRPF-202ENST00000549580 FMN2Q9NZ56 1722 aa0.3□□□□□ -2.36
SNRPF-202ENST00000549580 I3L3M4 83 aa0.3□□□□□ -2.36
SNRPF-202ENST00000549580 SPINK4O60575 86 aa0.3□□□□□ -2.36
SNRPF-202ENST00000549580 CYB5AP00167 134 aa0.3□□□□□ -2.36
SNRPF-202ENST00000549580 C9orf62Q8N4C0 152 aa0.3□□□□□ -2.36
SNRPF-202ENST00000549580 CHD9Q3L8U1 2897 aa0.3□□□□□ -2.36
SNRPF-202ENST00000549580 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
SNRPF-202ENST00000549580 SLIT1O75093 1534 aa0.29□□□□□ -2.36
SNRPF-202ENST00000549580 UNC79Q9P2D8 2635 aa0.29□□□□□ -2.36
SNRPF-202ENST00000549580 CPSF4LA6NMK7 179 aaKnown RBP0.29□□□□□ -2.36
SNRPF-202ENST00000549580 NMSQ5H8A3 153 aa0.29□□□□□ -2.36
SNRPF-202ENST00000549580 DEFB105AQ8NG35 78 aa0.29□□□□□ -2.36
SNRPF-202ENST00000549580 OTOGQ6ZRI0 2925 aa0.28□□□□□ -2.36
SNRPF-202ENST00000549580 PLGLAQ15195 96 aa0.28□□□□□ -2.36
SNRPF-202ENST00000549580 RABAC1Q9UI14 185 aa0.28□□□□□ -2.36
SNRPF-202ENST00000549580 KIF20BQ96Q89 1820 aa0.28□□□□□ -2.36
SNRPF-202ENST00000549580 MAST4O15021 2626 aa0.28□□□□□ -2.37
SNRPF-202ENST00000549580 URB1O60287 2271 aaKnown RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms