RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ANKRD39Q53RE8 183 aa10.38□□□□□ -0.75
SSH1-208ENST00000548522 MRPL35Q9NZE8 188 aaKnown RBP10.38□□□□□ -0.75
SSH1-208ENST00000548522 PLAC8Q9NZF1 115 aa10.38□□□□□ -0.75
SSH1-208ENST00000548522 PYGO1Q9Y3Y4 419 aa10.38□□□□□ -0.75
SSH1-208ENST00000548522 COL5A1-AS1Q5SY13 56 aa10.37□□□□□ -0.75
SSH1-208ENST00000548522 C15orf56Q8N910 161 aa10.37□□□□□ -0.75
SSH1-208ENST00000548522 CHTOPQ9Y3Y2 248 aaKnown RBP10.37□□□□□ -0.75
SSH1-208ENST00000548522 PMVKQ15126 192 aa10.36□□□□□ -0.75
SSH1-208ENST00000548522 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.35□□□□□ -0.75
SSH1-208ENST00000548522 TRAV8-4A0A0B4J246 113 aa10.35□□□□□ -0.75
SSH1-208ENST00000548522 TMEM243Q9BU79 118 aa10.35□□□□□ -0.75
SSH1-208ENST00000548522 HIGD1BQ9P298 99 aa10.35□□□□□ -0.75
SSH1-208ENST00000548522 PRR3P79522 188 aaKnown RBP10.34□□□□□ -0.75
SSH1-208ENST00000548522 COX6A2Q02221 97 aa10.34□□□□□ -0.75
SSH1-208ENST00000548522 ZC2HC1BQ5TFG8 222 aa10.34□□□□□ -0.75
SSH1-208ENST00000548522 STPG4Q8N801 248 aa10.34□□□□□ -0.75
SSH1-208ENST00000548522 IGKV2-24A0A0C4DH68 120 aa10.33□□□□□ -0.76
SSH1-208ENST00000548522 A0A1B0GUV1 79 aa10.33□□□□□ -0.76
SSH1-208ENST00000548522 HIGD2BQ4VC39 106 aa10.33□□□□□ -0.76
SSH1-208ENST00000548522 C2orf91Q6ZV80 131 aa10.33□□□□□ -0.76
SSH1-208ENST00000548522 LINC01600Q96MT4 127 aa10.33□□□□□ -0.76
SSH1-208ENST00000548522 GAGE12HA6NDE8 117 aa10.32□□□□□ -0.76
SSH1-208ENST00000548522 C7orf33Q8WU49 177 aa10.32□□□□□ -0.76
SSH1-208ENST00000548522 TIMM21Q9BVV7 248 aa10.32□□□□□ -0.76
SSH1-208ENST00000548522 CST9LQ9H4G1 147 aa10.32□□□□□ -0.76
SSH1-208ENST00000548522 SPANXA1Q9NS26 97 aa10.32□□□□□ -0.76
SSH1-208ENST00000548522 IGKV3OR2-268A0A0C4DH90 116 aa10.31□□□□□ -0.76
SSH1-208ENST00000548522 E9PLD3 99 aa10.31□□□□□ -0.76
SSH1-208ENST00000548522 SMAGPQ0VAQ4 97 aa10.31□□□□□ -0.76
SSH1-208ENST00000548522 LPAP08519 4548 aa10.3□□□□□ -0.76
SSH1-208ENST00000548522 SEC11AP67812 179 aa10.3□□□□□ -0.76
SSH1-208ENST00000548522 HSD52Q0P140 79 aa10.3□□□□□ -0.76
SSH1-208ENST00000548522 COTL1Q14019 142 aa10.3□□□□□ -0.76
SSH1-208ENST00000548522 IGLV4-69A0A075B6H9 119 aa10.29□□□□□ -0.76
SSH1-208ENST00000548522 C11orf86A6NJI1 115 aa10.29□□□□□ -0.76
SSH1-208ENST00000548522 NMUP48645 174 aa10.29□□□□□ -0.76
SSH1-208ENST00000548522 HERVK_113P61574 105 aa10.29□□□□□ -0.76
SSH1-208ENST00000548522 RPL39P62891 51 aaKnown RBP10.29□□□□□ -0.76
SSH1-208ENST00000548522 BVES-AS1Q5T3Y7 98 aa10.29□□□□□ -0.76
SSH1-208ENST00000548522 AMELXQ99217 191 aa10.29□□□□□ -0.76
SSH1-208ENST00000548522 IGLV4-3A0A075B6K6 122 aa10.28□□□□□ -0.76
SSH1-208ENST00000548522 A0A096LNI7 61 aa10.28□□□□□ -0.76
SSH1-208ENST00000548522 UBE2L6O14933 153 aa10.28□□□□□ -0.76
SSH1-208ENST00000548522 MRPS36P82909 103 aaKnown RBP10.28□□□□□ -0.76
SSH1-208ENST00000548522 TAL2Q16559 108 aa10.28□□□□□ -0.76
SSH1-208ENST00000548522 A0A1B0GV90 55 aa10.27□□□□□ -0.77
SSH1-208ENST00000548522 CSDC2Q9Y534 153 aaKnown RBP10.27□□□□□ -0.77
SSH1-208ENST00000548522 IGKV2D-26A0A0A0MRZ7 120 aa10.26□□□□□ -0.77
SSH1-208ENST00000548522 A0A0J9YXV3 536 aa10.26□□□□□ -0.77
SSH1-208ENST00000548522 H7C423 109 aa10.26□□□□□ -0.77
SSH1-208ENST00000548522 HINT1P49773 126 aaPredicted RBP10.26□□□□□ -0.77
SSH1-208ENST00000548522 PCP2Q8IVA1 136 aa10.26□□□□□ -0.77
SSH1-208ENST00000548522 CHCHD10Q8WYQ3 142 aaPredicted RBP10.26□□□□□ -0.77
SSH1-208ENST00000548522 GVQW2A0A096LPI5 108 aaPredicted RBP10.25□□□□□ -0.77
SSH1-208ENST00000548522 KRTAP10-8P60410 259 aa10.25□□□□□ -0.77
SSH1-208ENST00000548522 BATFQ16520 125 aa10.25□□□□□ -0.77
SSH1-208ENST00000548522 VCX2Q9H322 139 aa10.25□□□□□ -0.77
SSH1-208ENST00000548522 UBE2D4Q9Y2X8 147 aa10.25□□□□□ -0.77
SSH1-208ENST00000548522 CFAP161Q6P656 301 aa10.24□□□□□ -0.77
SSH1-208ENST00000548522 LINC00526Q96FQ7 95 aa10.24□□□□□ -0.77
SSH1-208ENST00000548522 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.23□□□□□ -0.77
SSH1-208ENST00000548522 IGKV2-29A2NJV5 120 aaPredicted RBP10.23□□□□□ -0.77
SSH1-208ENST00000548522 MYMXA0A1B0GTQ4 84 aa10.22□□□□□ -0.77
SSH1-208ENST00000548522 A6NDN8 102 aa10.22□□□□□ -0.77
SSH1-208ENST00000548522 FOXI1Q12951 378 aa10.22□□□□□ -0.77
SSH1-208ENST00000548522 FAM19A3Q7Z5A8 133 aa10.22□□□□□ -0.77
SSH1-208ENST00000548522 ORAOV1Q8WV07 137 aa10.22□□□□□ -0.77
SSH1-208ENST00000548522 FAM104AQ969W3 186 aa10.21□□□□□ -0.77
SSH1-208ENST00000548522 TP73-AS1Q9UF72 201 aa10.21□□□□□ -0.77
SSH1-208ENST00000548522 TINCRA0A1B0GVN0 87 aa10.2□□□□□ -0.78
SSH1-208ENST00000548522 AMMECR1LQ6DCA0 310 aa10.2□□□□□ -0.78
SSH1-208ENST00000548522 SPINK6Q6UWN8 80 aa10.2□□□□□ -0.78
SSH1-208ENST00000548522 TMEM223A0PJW6 202 aa10.19□□□□□ -0.78
SSH1-208ENST00000548522 ZNF25P17030 456 aaPredicted RBP10.19□□□□□ -0.78
SSH1-208ENST00000548522 XCL1P47992 114 aa10.19□□□□□ -0.78
SSH1-208ENST00000548522 SRSF9Q13242 221 aaKnown RBP eCLIP10.19□□□□□ -0.78
SSH1-208ENST00000548522 PLEKHB2Q96CS7 222 aa10.19□□□□□ -0.78
SSH1-208ENST00000548522 IGLV5-45A0A087WSX0 123 aa10.18□□□□□ -0.78
SSH1-208ENST00000548522 LEPROTO15243 131 aa10.18□□□□□ -0.78
SSH1-208ENST00000548522 ZNF22P17026 224 aaPredicted RBP10.18□□□□□ -0.78
SSH1-208ENST00000548522 REG3GQ6UW15 175 aa10.18□□□□□ -0.78
SSH1-208ENST00000548522 H3BRM9 83 aa10.17□□□□□ -0.78
SSH1-208ENST00000548522 TMEM170BQ5T4T1 132 aa10.17□□□□□ -0.78
SSH1-208ENST00000548522 CARD19Q96LW7 228 aa10.17□□□□□ -0.78
SSH1-208ENST00000548522 ZNF815PA8K554 130 aa10.16□□□□□ -0.78
SSH1-208ENST00000548522 TAX1BP3O14907 124 aa10.16□□□□□ -0.78
SSH1-208ENST00000548522 UBE2D1P51668 147 aa10.16□□□□□ -0.78
SSH1-208ENST00000548522 SPANXB1Q9NS25 103 aaPredicted RBP10.16□□□□□ -0.78
SSH1-208ENST00000548522 CCL25O15444 150 aa10.15□□□□□ -0.78
SSH1-208ENST00000548522 Q6ZUT4 128 aa10.15□□□□□ -0.78
SSH1-208ENST00000548522 CEND1Q8N111 149 aa10.15□□□□□ -0.78
SSH1-208ENST00000548522 OPRPNQ99935 248 aaPredicted RBP10.15□□□□□ -0.78
SSH1-208ENST00000548522 J3QQQ9 107 aa10.14□□□□□ -0.79
SSH1-208ENST00000548522 Q6ZRP5 223 aa10.14□□□□□ -0.79
SSH1-208ENST00000548522 OR5A1Q8NGJ0 315 aa10.14□□□□□ -0.79
SSH1-208ENST00000548522 TTTY13Q9BZ97 58 aa10.14□□□□□ -0.79
SSH1-208ENST00000548522 LINC00474Q9P2X8 69 aa10.14□□□□□ -0.79
SSH1-208ENST00000548522 MUC2Q02817 5179 aa10.13□□□□□ -0.79
SSH1-208ENST00000548522 IGHV1-58A0A0C4DH39 117 aa10.13□□□□□ -0.79
SSH1-208ENST00000548522 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms