RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 TMEM141Q96I45 108 aa6.05□□□□□ -1.44
SLC48A1-206ENST00000548498 PACRGQ96M98 296 aaPredicted RBP6.05□□□□□ -1.44
SLC48A1-206ENST00000548498 HIST1H2BNQ99877 126 aa6.05□□□□□ -1.44
SLC48A1-206ENST00000548498 HIST1H2BMQ99879 126 aa6.05□□□□□ -1.44
SLC48A1-206ENST00000548498 CYSLTR1Q9Y271 337 aa6.05□□□□□ -1.44
SLC48A1-206ENST00000548498 TRAPPC1Q9Y5R8 145 aa6.05□□□□□ -1.44
SLC48A1-206ENST00000548498 LOC107984640A0A0U1RRK4 108 aa6.04□□□□□ -1.44
SLC48A1-206ENST00000548498 C5orf52A6NGY3 159 aa6.04□□□□□ -1.44
SLC48A1-206ENST00000548498 UBE2D1P51668 147 aa6.04□□□□□ -1.44
SLC48A1-206ENST00000548498 SPAG11BQ08648 103 aa6.04□□□□□ -1.44
SLC48A1-206ENST00000548498 C2orf66Q6UXQ4 117 aa6.04□□□□□ -1.44
SLC48A1-206ENST00000548498 C7orf33Q8WU49 177 aa6.04□□□□□ -1.44
SLC48A1-206ENST00000548498 CAMK2N2Q96S95 79 aa6.04□□□□□ -1.44
SLC48A1-206ENST00000548498 IGKV2-24A0A0C4DH68 120 aa6.03□□□□□ -1.44
SLC48A1-206ENST00000548498 KRTAP9-6A0A140TA67 174 aa6.03□□□□□ -1.44
SLC48A1-206ENST00000548498 LINC01549A6NIU2 74 aa6.03□□□□□ -1.44
SLC48A1-206ENST00000548498 G0S2P27469 103 aa6.03□□□□□ -1.44
SLC48A1-206ENST00000548498 TIMM17AQ99595 171 aa6.03□□□□□ -1.44
SLC48A1-206ENST00000548498 TEX43Q6ZNM6 134 aa6.02□□□□□ -1.45
SLC48A1-206ENST00000548498 TOMM6Q96B49 74 aa6.02□□□□□ -1.45
SLC48A1-206ENST00000548498 DPH3Q96FX2 82 aa6.02□□□□□ -1.45
SLC48A1-206ENST00000548498 LOC389332A0A1B0GUA5 103 aa6.01□□□□□ -1.45
SLC48A1-206ENST00000548498 NDUFA1O15239 70 aa6.01□□□□□ -1.45
SLC48A1-206ENST00000548498 FABP9Q0Z7S8 132 aa6.01□□□□□ -1.45
SLC48A1-206ENST00000548498 SRSF9Q13242 221 aaKnown RBP eCLIP6.01□□□□□ -1.45
SLC48A1-206ENST00000548498 PAPPA-AS1Q5QFB9 102 aa6.01□□□□□ -1.45
SLC48A1-206ENST00000548498 ORAOV1Q8WV07 137 aa6.01□□□□□ -1.45
SLC48A1-206ENST00000548498 C2orf88Q9BSF0 95 aa6.01□□□□□ -1.45
SLC48A1-206ENST00000548498 TRBV30A0A0K0K1B3 111 aa6□□□□□ -1.45
SLC48A1-206ENST00000548498 LOC105371267A0A1B0GV96 52 aa6□□□□□ -1.45
SLC48A1-206ENST00000548498 A0A1W2PNN7 141 aa6□□□□□ -1.45
SLC48A1-206ENST00000548498 Q6ZN92 141 aa6□□□□□ -1.45
SLC48A1-206ENST00000548498 ERASQ7Z444 233 aa6□□□□□ -1.45
SLC48A1-206ENST00000548498 ALKBH7Q9BT30 221 aaPredicted RBP6□□□□□ -1.45
SLC48A1-206ENST00000548498 VCX2Q9H322 139 aa6□□□□□ -1.45
SLC48A1-206ENST00000548498 C6orf48Q9UBA6 75 aa6□□□□□ -1.45
SLC48A1-206ENST00000548498 IGLV5-45A0A087WSX0 123 aa5.99□□□□□ -1.45
SLC48A1-206ENST00000548498 SEC11AP67812 179 aa5.99□□□□□ -1.45
SLC48A1-206ENST00000548498 C9orf116Q5BN46 136 aaPredicted RBP5.99□□□□□ -1.45
SLC48A1-206ENST00000548498 C10orf25Q5T742 122 aa5.99□□□□□ -1.45
SLC48A1-206ENST00000548498 Q6ZRP5 223 aa5.99□□□□□ -1.45
SLC48A1-206ENST00000548498 HERVK_113P63121 156 aa5.98□□□□□ -1.45
SLC48A1-206ENST00000548498 GAGE2BQ13066 116 aa5.98□□□□□ -1.45
SLC48A1-206ENST00000548498 REG3GQ6UW15 175 aa5.98□□□□□ -1.45
SLC48A1-206ENST00000548498 SPINK6Q6UWN8 80 aa5.98□□□□□ -1.45
SLC48A1-206ENST00000548498 UNQ6190/PRO20217Q6UXQ8 127 aa5.98□□□□□ -1.45
SLC48A1-206ENST00000548498 Q8IZM0 81 aa5.98□□□□□ -1.45
SLC48A1-206ENST00000548498 CHCHD1Q96BP2 118 aaKnown RBP5.98□□□□□ -1.45
SLC48A1-206ENST00000548498 NDUFC2-KCTD14E9PQ53 114 aa5.97□□□□□ -1.45
SLC48A1-206ENST00000548498 SMIM6P0DI80 62 aa5.97□□□□□ -1.45
SLC48A1-206ENST00000548498 S100A2P29034 98 aa5.97□□□□□ -1.45
SLC48A1-206ENST00000548498 SNRPEP62304 92 aaKnown RBP5.97□□□□□ -1.45
SLC48A1-206ENST00000548498 KIAA1644Q3SXP7 199 aa5.97□□□□□ -1.45
SLC48A1-206ENST00000548498 HIST3H2BBQ8N257 126 aa5.97□□□□□ -1.45
SLC48A1-206ENST00000548498 C18orf32Q8TCD1 76 aa5.97□□□□□ -1.45
SLC48A1-206ENST00000548498 TINCRA0A1B0GVN0 87 aa5.96□□□□□ -1.46
SLC48A1-206ENST00000548498 ZC2HC1BQ5TFG8 222 aa5.96□□□□□ -1.46
SLC48A1-206ENST00000548498 KRTAP7-1Q8IUC3 87 aa5.96□□□□□ -1.46
SLC48A1-206ENST00000548498 AKR1D1P51857 326 aa5.95□□□□□ -1.46
SLC48A1-206ENST00000548498 NDUFA6P56556 154 aa5.95□□□□□ -1.46
SLC48A1-206ENST00000548498 RPL18AQ02543 176 aaKnown RBP5.95□□□□□ -1.46
SLC48A1-206ENST00000548498 BAGE3Q86Y29 109 aa5.95□□□□□ -1.46
SLC48A1-206ENST00000548498 CDKN2A-AS1Q9UH64 79 aa5.95□□□□□ -1.46
SLC48A1-206ENST00000548498 A0A096LNJ9 63 aa5.94□□□□□ -1.46
SLC48A1-206ENST00000548498 CXCL5P42830 114 aa5.94□□□□□ -1.46
SLC48A1-206ENST00000548498 URB1-AS1Q96HZ7 61 aa5.94□□□□□ -1.46
SLC48A1-206ENST00000548498 SCGB3A1Q96QR1 104 aa5.94□□□□□ -1.46
SLC48A1-206ENST00000548498 CST9LQ9H4G1 147 aa5.94□□□□□ -1.46
SLC48A1-206ENST00000548498 PSORS1C2Q9UIG4 136 aa5.94□□□□□ -1.46
SLC48A1-206ENST00000548498 SMIM1B2RUZ4 78 aa5.93□□□□□ -1.46
SLC48A1-206ENST00000548498 HSBP1O75506 76 aa5.93□□□□□ -1.46
SLC48A1-206ENST00000548498 PDZD11Q5EBL8 140 aa5.93□□□□□ -1.46
SLC48A1-206ENST00000548498 C9orf129Q5T035 196 aaKnown RBP5.93□□□□□ -1.46
SLC48A1-206ENST00000548498 C2orf82Q6UX34 121 aa5.93□□□□□ -1.46
SLC48A1-206ENST00000548498 HIST1H2BLQ99880 126 aa5.93□□□□□ -1.46
SLC48A1-206ENST00000548498 F8VRH5 84 aa5.92□□□□□ -1.46
SLC48A1-206ENST00000548498 SERF1AO75920 110 aa5.92□□□□□ -1.46
SLC48A1-206ENST00000548498 LINC00310P59036 64 aa5.92□□□□□ -1.46
SLC48A1-206ENST00000548498 PMVKQ15126 192 aa5.92□□□□□ -1.46
SLC48A1-206ENST00000548498 FA2HQ7L5A8 372 aa5.92□□□□□ -1.46
SLC48A1-206ENST00000548498 PHF5AQ7RTV0 110 aaKnown RBP5.92□□□□□ -1.46
SLC48A1-206ENST00000548498 GEMIN7Q9H840 131 aaKnown RBP5.92□□□□□ -1.46
SLC48A1-206ENST00000548498 IGLV5-39A0A0G2JS06 123 aa5.91□□□□□ -1.46
SLC48A1-206ENST00000548498 FAM168BA1KXE4 195 aa5.91□□□□□ -1.46
SLC48A1-206ENST00000548498 LINC00614P0C842 121 aa5.91□□□□□ -1.46
SLC48A1-206ENST00000548498 IGLC3P0DOY3 106 aa5.91□□□□□ -1.46
SLC48A1-206ENST00000548498 CKS1BP61024 79 aa5.91□□□□□ -1.46
SLC48A1-206ENST00000548498 C6orf226Q5I0X4 101 aa5.91□□□□□ -1.46
SLC48A1-206ENST00000548498 KRTAP11-1Q8IUC1 163 aa5.91□□□□□ -1.46
SLC48A1-206ENST00000548498 TP73-AS1Q9UF72 201 aa5.91□□□□□ -1.46
SLC48A1-206ENST00000548498 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
SLC48A1-206ENST00000548498 PRSS2P07478 247 aa5.9□□□□□ -1.46
SLC48A1-206ENST00000548498 GAGE2EQ4V326 116 aa5.9□□□□□ -1.46
SLC48A1-206ENST00000548498 LINC00469Q8N7U9 141 aa5.9□□□□□ -1.46
SLC48A1-206ENST00000548498 GAGE2DQ9UEU5 116 aa5.9□□□□□ -1.46
SLC48A1-206ENST00000548498 A0A0U1RQV1 116 aa5.89□□□□□ -1.47
SLC48A1-206ENST00000548498 HBDP02042 147 aa5.89□□□□□ -1.47
SLC48A1-206ENST00000548498 FABP4P15090 132 aa5.89□□□□□ -1.47
SLC48A1-206ENST00000548498 JOSD1Q15040 202 aaPredicted RBP5.89□□□□□ -1.47
SLC48A1-206ENST00000548498 HSPB8Q9UJY1 196 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms