RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 CXCL5P42830 114 aa14.53□□□□□ -0.08
CTDSP2-203ENST00000547701 RPL18AQ02543 176 aaKnown RBP14.53□□□□□ -0.08
CTDSP2-203ENST00000547701 ODF1Q14990 250 aa14.53□□□□□ -0.08
CTDSP2-203ENST00000547701 C6orf226Q5I0X4 101 aa14.53□□□□□ -0.08
CTDSP2-203ENST00000547701 PACRGQ96M98 296 aaPredicted RBP14.53□□□□□ -0.08
CTDSP2-203ENST00000547701 SMIM1B2RUZ4 78 aa14.52□□□□□ -0.09
CTDSP2-203ENST00000547701 NDUFC2-KCTD14E9PQ53 114 aa14.52□□□□□ -0.09
CTDSP2-203ENST00000547701 ATP5LO75964 103 aa14.52□□□□□ -0.09
CTDSP2-203ENST00000547701 IGLC3P0DOY3 106 aa14.52□□□□□ -0.09
CTDSP2-203ENST00000547701 HNRNPA3P51991 378 aaKnown RBP14.52□□□□□ -0.09
CTDSP2-203ENST00000547701 C9orf116Q5BN46 136 aaPredicted RBP14.52□□□□□ -0.09
CTDSP2-203ENST00000547701 C2orf82Q6UX34 121 aa14.52□□□□□ -0.09
CTDSP2-203ENST00000547701 LRP1Q07954 4544 aaKnown RBP14.51□□□□□ -0.09
CTDSP2-203ENST00000547701 LINC00469Q8N7U9 141 aa14.51□□□□□ -0.09
CTDSP2-203ENST00000547701 CKS1BP61024 79 aa14.49□□□□□ -0.09
CTDSP2-203ENST00000547701 PRR3P79522 188 aaKnown RBP14.49□□□□□ -0.09
CTDSP2-203ENST00000547701 F8VRH5 84 aa14.48□□□□□ -0.09
CTDSP2-203ENST00000547701 TOMM7Q9P0U1 55 aa14.47□□□□□ -0.09
CTDSP2-203ENST00000547701 FAT3Q8TDW7 4589 aa14.47□□□□□ -0.09
CTDSP2-203ENST00000547701 HERC1Q15751 4861 aa14.47□□□□□ -0.09
CTDSP2-203ENST00000547701 H3BRM9 83 aa14.46□□□□□ -0.09
CTDSP2-203ENST00000547701 IGLV5-39A0A0G2JS06 123 aa14.45□□□□□ -0.1
CTDSP2-203ENST00000547701 COLCA2A8K830 154 aa14.45□□□□□ -0.1
CTDSP2-203ENST00000547701 PMCHL1Q16048 86 aa14.45□□□□□ -0.1
CTDSP2-203ENST00000547701 TRGC2P03986 189 aa14.44□□□□□ -0.1
CTDSP2-203ENST00000547701 COX7B2Q8TF08 81 aa14.44□□□□□ -0.1
CTDSP2-203ENST00000547701 TRAV12-1A0A0B4J245 112 aa14.42□□□□□ -0.1
CTDSP2-203ENST00000547701 J3QL48 77 aa14.41□□□□□ -0.1
CTDSP2-203ENST00000547701 ZNF22P17026 224 aaPredicted RBP14.41□□□□□ -0.1
CTDSP2-203ENST00000547701 SRSF9Q13242 221 aaKnown RBP eCLIP14.41□□□□□ -0.1
CTDSP2-203ENST00000547701 GAGE2EQ4V326 116 aa14.41□□□□□ -0.1
CTDSP2-203ENST00000547701 BAGE3Q86Y29 109 aa14.41□□□□□ -0.1
CTDSP2-203ENST00000547701 KRTAP7-1Q8IUC3 87 aa14.41□□□□□ -0.1
CTDSP2-203ENST00000547701 GAGE2DQ9UEU5 116 aa14.41□□□□□ -0.1
CTDSP2-203ENST00000547701 C9orf129Q5T035 196 aaKnown RBP14.4□□□□□ -0.1
CTDSP2-203ENST00000547701 SPINK8P0C7L1 97 aa14.39□□□□□ -0.11
CTDSP2-203ENST00000547701 IFI27L1Q96BM0 104 aa14.39□□□□□ -0.11
CTDSP2-203ENST00000547701 HSBP1O75506 76 aa14.38□□□□□ -0.11
CTDSP2-203ENST00000547701 NDUFA6P56556 154 aa14.38□□□□□ -0.11
CTDSP2-203ENST00000547701 SPINK6Q6UWN8 80 aa14.38□□□□□ -0.11
CTDSP2-203ENST00000547701 FAM168BA1KXE4 195 aa14.37□□□□□ -0.11
CTDSP2-203ENST00000547701 PHF5AQ7RTV0 110 aaKnown RBP14.37□□□□□ -0.11
CTDSP2-203ENST00000547701 C11orf86A6NJI1 115 aa14.36□□□□□ -0.11
CTDSP2-203ENST00000547701 LINC00310P59036 64 aa14.36□□□□□ -0.11
CTDSP2-203ENST00000547701 PSORS1C2Q9UIG4 136 aa14.36□□□□□ -0.11
CTDSP2-203ENST00000547701 SFTA2Q6UW10 78 aa14.35□□□□□ -0.11
CTDSP2-203ENST00000547701 CHTOPQ9Y3Y2 248 aaKnown RBP14.35□□□□□ -0.11
CTDSP2-203ENST00000547701 PLA2G2DQ9UNK4 145 aa14.33□□□□□ -0.12
CTDSP2-203ENST00000547701 TP73-AS1Q9UF72 201 aa14.32□□□□□ -0.12
CTDSP2-203ENST00000547701 M0QXV9 152 aa14.31□□□□□ -0.12
CTDSP2-203ENST00000547701 SERF1AO75920 110 aa14.31□□□□□ -0.12
CTDSP2-203ENST00000547701 FAM19A5Q7Z5A7 132 aaPredicted RBP14.31□□□□□ -0.12
CTDSP2-203ENST00000547701 FAM19A2Q8N3H0 131 aa14.31□□□□□ -0.12
CTDSP2-203ENST00000547701 MT1HL1P0DM35 61 aa14.3□□□□□ -0.12
CTDSP2-203ENST00000547701 COX17Q14061 63 aa14.3□□□□□ -0.12
CTDSP2-203ENST00000547701 TMEM170BQ5T4T1 132 aa14.29□□□□□ -0.12
CTDSP2-203ENST00000547701 LEPROTL1O95214 131 aa14.28□□□□□ -0.12
CTDSP2-203ENST00000547701 LINC01600Q96MT4 127 aa14.28□□□□□ -0.12
CTDSP2-203ENST00000547701 XAGE1AQ9HD64 81 aa14.28□□□□□ -0.12
CTDSP2-203ENST00000547701 TMEM223A0PJW6 202 aa14.27□□□□□ -0.13
CTDSP2-203ENST00000547701 KRTAP11-1Q8IUC1 163 aa14.27□□□□□ -0.13
CTDSP2-203ENST00000547701 SERTAD4-AS1Q5TG53 156 aa14.26□□□□□ -0.13
CTDSP2-203ENST00000547701 ZNF625Q96I27 306 aaPredicted RBP14.26□□□□□ -0.13
CTDSP2-203ENST00000547701 C22orf24Q9Y442 160 aa14.26□□□□□ -0.13
CTDSP2-203ENST00000547701 IGLV5-37A0A075B6J1 123 aa14.25□□□□□ -0.13
CTDSP2-203ENST00000547701 NUPR1O60356 82 aa14.25□□□□□ -0.13
CTDSP2-203ENST00000547701 LBHQ53QV2 105 aaPredicted RBP14.25□□□□□ -0.13
CTDSP2-203ENST00000547701 C1orf137Q5JT78 98 aa14.25□□□□□ -0.13
CTDSP2-203ENST00000547701 REG3GQ6UW15 175 aa14.25□□□□□ -0.13
CTDSP2-203ENST00000547701 IGLV7-43P04211 117 aa14.24□□□□□ -0.13
CTDSP2-203ENST00000547701 HSPB8Q9UJY1 196 aa14.24□□□□□ -0.13
CTDSP2-203ENST00000547701 ERG28Q9UKR5 140 aa14.22□□□□□ -0.13
CTDSP2-203ENST00000547701 TNXBP22105 4242 aa14.21□□□□□ -0.13
CTDSP2-203ENST00000547701 HIST1H2BKO60814 126 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 SCO1O75880 301 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 HIST1H2BJP06899 126 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 HIST1H2BOP23527 126 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 HIST1H2BBP33778 126 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 HIST1H2BDP58876 126 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 HIST1H2BCP62807 126 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 UBE2BP63146 152 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 HIST2H2BEQ16778 126 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 MRPL55Q7Z7F7 128 aaKnown RBP14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 HIST1H2BHQ93079 126 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 HIST1H2BNQ99877 126 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 HIST1H2BMQ99879 126 aa14.2□□□□□ -0.14
CTDSP2-203ENST00000547701 PLNP26678 52 aa14.18□□□□□ -0.14
CTDSP2-203ENST00000547701 KRTAP10-8P60410 259 aa14.17□□□□□ -0.14
CTDSP2-203ENST00000547701 DIRC1Q969H9 104 aa14.17□□□□□ -0.14
CTDSP2-203ENST00000547701 PFN2P35080 140 aa14.15□□□□□ -0.14
CTDSP2-203ENST00000547701 SND1-IT1Q9HBX3 110 aa14.15□□□□□ -0.14
CTDSP2-203ENST00000547701 HERV-K104P63124 156 aa14.14□□□□□ -0.15
CTDSP2-203ENST00000547701 COA6Q5JTJ3 125 aaKnown RBP14.14□□□□□ -0.15
CTDSP2-203ENST00000547701 H0Y9J4 135 aa14.13□□□□□ -0.15
CTDSP2-203ENST00000547701 LINC00167Q96N53 147 aa14.13□□□□□ -0.15
CTDSP2-203ENST00000547701 LINC00587B1AMM8 73 aa14.12□□□□□ -0.15
CTDSP2-203ENST00000547701 FABP4P15090 132 aa14.12□□□□□ -0.15
CTDSP2-203ENST00000547701 DPM2O94777 84 aa14.11□□□□□ -0.15
CTDSP2-203ENST00000547701 VPREB1P12018 145 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms