RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 RPL18AQ02543 176 aaKnown RBP9.49□□□□□ -0.89
SSH1-204ENST00000546697 CST9LQ9H4G1 147 aa9.49□□□□□ -0.89
SSH1-204ENST00000546697 FA2HQ7L5A8 372 aa9.48□□□□□ -0.89
SSH1-204ENST00000546697 TRAPPC1Q9Y5R8 145 aa9.48□□□□□ -0.89
SSH1-204ENST00000546697 SMIM1B2RUZ4 78 aa9.47□□□□□ -0.89
SSH1-204ENST00000546697 PMVKQ15126 192 aa9.47□□□□□ -0.89
SSH1-204ENST00000546697 SPINK6Q6UWN8 80 aa9.47□□□□□ -0.89
SSH1-204ENST00000546697 C2orf82Q6UX34 121 aa9.47□□□□□ -0.89
SSH1-204ENST00000546697 KRTAP7-1Q8IUC3 87 aa9.47□□□□□ -0.89
SSH1-204ENST00000546697 LINC00614P0C842 121 aa9.46□□□□□ -0.9
SSH1-204ENST00000546697 S100A1P23297 94 aa9.46□□□□□ -0.9
SSH1-204ENST00000546697 CXCL5P42830 114 aa9.46□□□□□ -0.9
SSH1-204ENST00000546697 PDZD11Q5EBL8 140 aa9.46□□□□□ -0.9
SSH1-204ENST00000546697 GEMIN7Q9H840 131 aaKnown RBP9.46□□□□□ -0.9
SSH1-204ENST00000546697 SMCO4Q9NRQ5 59 aa9.46□□□□□ -0.9
SSH1-204ENST00000546697 SERTAD4-AS1Q5TG53 156 aa9.45□□□□□ -0.9
SSH1-204ENST00000546697 PACRGQ96M98 296 aaPredicted RBP9.45□□□□□ -0.9
SSH1-204ENST00000546697 F8VRH5 84 aa9.44□□□□□ -0.9
SSH1-204ENST00000546697 ATP6V1G1O75348 118 aa9.44□□□□□ -0.9
SSH1-204ENST00000546697 PRSS2P07478 247 aa9.44□□□□□ -0.9
SSH1-204ENST00000546697 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
SSH1-204ENST00000546697 LINC01600Q96MT4 127 aa9.44□□□□□ -0.9
SSH1-204ENST00000546697 IGLC3P0DOY3 106 aa9.43□□□□□ -0.9
SSH1-204ENST00000546697 RAB5BP61020 215 aa9.43□□□□□ -0.9
SSH1-204ENST00000546697 C9orf129Q5T035 196 aaKnown RBP9.43□□□□□ -0.9
SSH1-204ENST00000546697 LINC00469Q8N7U9 141 aa9.43□□□□□ -0.9
SSH1-204ENST00000546697 PSORS1C2Q9UIG4 136 aa9.43□□□□□ -0.9
SSH1-204ENST00000546697 IGLV5-39A0A0G2JS06 123 aa9.42□□□□□ -0.9
SSH1-204ENST00000546697 HBDP02042 147 aa9.42□□□□□ -0.9
SSH1-204ENST00000546697 CKS1BP61024 79 aa9.42□□□□□ -0.9
SSH1-204ENST00000546697 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
SSH1-204ENST00000546697 FAM168BA1KXE4 195 aa9.41□□□□□ -0.9
SSH1-204ENST00000546697 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
SSH1-204ENST00000546697 ATP5LO75964 103 aa9.39□□□□□ -0.91
SSH1-204ENST00000546697 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
SSH1-204ENST00000546697 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
SSH1-204ENST00000546697 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
SSH1-204ENST00000546697 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
SSH1-204ENST00000546697 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
SSH1-204ENST00000546697 KRTAP10-8P60410 259 aa9.38□□□□□ -0.91
SSH1-204ENST00000546697 TP73-AS1Q9UF72 201 aa9.38□□□□□ -0.91
SSH1-204ENST00000546697 H3BRM9 83 aa9.37□□□□□ -0.91
SSH1-204ENST00000546697 REG3GQ6UW15 175 aa9.37□□□□□ -0.91
SSH1-204ENST00000546697 PLA2G2DQ9UNK4 145 aa9.37□□□□□ -0.91
SSH1-204ENST00000546697 M0QXV9 152 aa9.36□□□□□ -0.91
SSH1-204ENST00000546697 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
SSH1-204ENST00000546697 FAM19A5Q7Z5A7 132 aaPredicted RBP9.36□□□□□ -0.91
SSH1-204ENST00000546697 IGLV7-43P04211 117 aa9.35□□□□□ -0.91
SSH1-204ENST00000546697 CBLN2Q8IUK8 224 aa9.35□□□□□ -0.91
SSH1-204ENST00000546697 TRAV12-1A0A0B4J245 112 aa9.34□□□□□ -0.91
SSH1-204ENST00000546697 SPINK8P0C7L1 97 aa9.34□□□□□ -0.91
SSH1-204ENST00000546697 PMCHL1Q16048 86 aa9.34□□□□□ -0.91
SSH1-204ENST00000546697 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
SSH1-204ENST00000546697 IGLV5-37A0A075B6J1 123 aa9.33□□□□□ -0.92
SSH1-204ENST00000546697 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
SSH1-204ENST00000546697 UBR4Q5T4S7 5183 aa9.33□□□□□ -0.92
SSH1-204ENST00000546697 C11orf86A6NJI1 115 aa9.32□□□□□ -0.92
SSH1-204ENST00000546697 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
SSH1-204ENST00000546697 BAGE3Q86Y29 109 aa9.31□□□□□ -0.92
SSH1-204ENST00000546697 XAGE1AQ9HD64 81 aa9.31□□□□□ -0.92
SSH1-204ENST00000546697 COX17Q14061 63 aa9.3□□□□□ -0.92
SSH1-204ENST00000546697 LBHQ53QV2 105 aaPredicted RBP9.3□□□□□ -0.92
SSH1-204ENST00000546697 SLC7A5P1Q8MH63 180 aa9.3□□□□□ -0.92
SSH1-204ENST00000546697 DIRC1Q969H9 104 aa9.3□□□□□ -0.92
SSH1-204ENST00000546697 H0Y9J4 135 aa9.29□□□□□ -0.92
SSH1-204ENST00000546697 NUPR1O60356 82 aa9.29□□□□□ -0.92
SSH1-204ENST00000546697 TRGC2P03986 189 aa9.29□□□□□ -0.92
SSH1-204ENST00000546697 LINC00310P59036 64 aa9.29□□□□□ -0.92
SSH1-204ENST00000546697 IFI27L1Q96BM0 104 aa9.29□□□□□ -0.92
SSH1-204ENST00000546697 ZNF625Q96I27 306 aaPredicted RBP9.29□□□□□ -0.92
SSH1-204ENST00000546697 COLCA2A8K830 154 aa9.28□□□□□ -0.92
SSH1-204ENST00000546697 NDUFA6P56556 154 aa9.28□□□□□ -0.92
SSH1-204ENST00000546697 MRPL55Q7Z7F7 128 aaKnown RBP9.28□□□□□ -0.92
SSH1-204ENST00000546697 CHTOPQ9Y3Y2 248 aaKnown RBP9.28□□□□□ -0.92
SSH1-204ENST00000546697 UBE2BP63146 152 aa9.27□□□□□ -0.93
SSH1-204ENST00000546697 TMEM223A0PJW6 202 aa9.26□□□□□ -0.93
SSH1-204ENST00000546697 HSBP1O75506 76 aa9.26□□□□□ -0.93
SSH1-204ENST00000546697 KRTAP1-4P0C5Y4 121 aa9.26□□□□□ -0.93
SSH1-204ENST00000546697 ZNF861PO60384 105 aa9.25□□□□□ -0.93
SSH1-204ENST00000546697 ERG28Q9UKR5 140 aa9.25□□□□□ -0.93
SSH1-204ENST00000546697 LRP2P98164 4655 aa9.25□□□□□ -0.93
SSH1-204ENST00000546697 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
SSH1-204ENST00000546697 LINC00167Q96N53 147 aa9.23□□□□□ -0.93
SSH1-204ENST00000546697 IGLV1-50A0A075B6I6 118 aa9.22□□□□□ -0.93
SSH1-204ENST00000546697 SERF1AO75920 110 aa9.22□□□□□ -0.93
SSH1-204ENST00000546697 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
SSH1-204ENST00000546697 SND1-IT1Q9HBX3 110 aa9.22□□□□□ -0.93
SSH1-204ENST00000546697 BCE1O60756 84 aa9.21□□□□□ -0.94
SSH1-204ENST00000546697 VPREB1P12018 145 aa9.21□□□□□ -0.94
SSH1-204ENST00000546697 KRTAP13-1Q8IUC0 172 aa9.21□□□□□ -0.94
SSH1-204ENST00000546697 LEPROTL1O95214 131 aa9.2□□□□□ -0.94
SSH1-204ENST00000546697 PFN2P35080 140 aa9.19□□□□□ -0.94
SSH1-204ENST00000546697 PLNP26678 52 aa9.17□□□□□ -0.94
SSH1-204ENST00000546697 RPL28P46779 137 aaKnown RBP9.17□□□□□ -0.94
SSH1-204ENST00000546697 HERV-K104P63124 156 aa9.17□□□□□ -0.94
SSH1-204ENST00000546697 RPL24P83731 157 aaKnown RBP9.17□□□□□ -0.94
SSH1-204ENST00000546697 NKAPP1Q8N9T2 125 aa9.17□□□□□ -0.94
SSH1-204ENST00000546697 Q8NDZ9 215 aa9.17□□□□□ -0.94
SSH1-204ENST00000546697 HSPB8Q9UJY1 196 aa9.17□□□□□ -0.94
SSH1-204ENST00000546697 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms