RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 C10orf25Q5T742 122 aa10.74□□□□□ -0.69
LTBR-215ENST00000546296 C2orf82Q6UX34 121 aa10.74□□□□□ -0.69
LTBR-215ENST00000546296 Q8IZM0 81 aa10.74□□□□□ -0.69
LTBR-215ENST00000546296 HSPB8Q9UJY1 196 aa10.74□□□□□ -0.69
LTBR-215ENST00000546296 A0A096LNI7 61 aa10.73□□□□□ -0.69
LTBR-215ENST00000546296 TRAV12-1A0A0B4J245 112 aa10.73□□□□□ -0.69
LTBR-215ENST00000546296 SMIM1B2RUZ4 78 aa10.73□□□□□ -0.69
LTBR-215ENST00000546296 EPM2AB3EWF7 344 aa10.73□□□□□ -0.69
LTBR-215ENST00000546296 H0Y8G0 127 aa10.73□□□□□ -0.69
LTBR-215ENST00000546296 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
LTBR-215ENST00000546296 GAGE2BQ13066 116 aa10.73□□□□□ -0.69
LTBR-215ENST00000546296 SPACA4Q8TDM5 124 aa10.73□□□□□ -0.69
LTBR-215ENST00000546296 LINC00474Q9P2X8 69 aa10.73□□□□□ -0.69
LTBR-215ENST00000546296 RPL18AQ02543 176 aaKnown RBP10.72□□□□□ -0.69
LTBR-215ENST00000546296 CIRBPQ14011 172 aaKnown RBP10.72□□□□□ -0.69
LTBR-215ENST00000546296 TMEM170BQ5T4T1 132 aa10.72□□□□□ -0.69
LTBR-215ENST00000546296 KRTAP17-1Q9BYP8 105 aa10.72□□□□□ -0.69
LTBR-215ENST00000546296 C6orf48Q9UBA6 75 aa10.72□□□□□ -0.69
LTBR-215ENST00000546296 ZNF22P17026 224 aaPredicted RBP10.71□□□□□ -0.69
LTBR-215ENST00000546296 COX7B2Q8TF08 81 aa10.71□□□□□ -0.69
LTBR-215ENST00000546296 A0A087WYN8 130 aa10.7□□□□□ -0.7
LTBR-215ENST00000546296 TRBV30A0A0K0K1B3 111 aa10.7□□□□□ -0.7
LTBR-215ENST00000546296 C11orf86A6NJI1 115 aa10.7□□□□□ -0.7
LTBR-215ENST00000546296 PTTG1IPP53801 180 aa10.7□□□□□ -0.7
LTBR-215ENST00000546296 LINC00528Q8N1L1 170 aa10.7□□□□□ -0.7
LTBR-215ENST00000546296 Q5VSD8 79 aa10.69□□□□□ -0.7
LTBR-215ENST00000546296 STPG4Q8N801 248 aa10.69□□□□□ -0.7
LTBR-215ENST00000546296 F8VRH5 84 aa10.68□□□□□ -0.7
LTBR-215ENST00000546296 CXCL5P42830 114 aa10.68□□□□□ -0.7
LTBR-215ENST00000546296 MAP1LC3CQ9BXW4 147 aa10.67□□□□□ -0.7
LTBR-215ENST00000546296 KRTAP4-5Q9BYR2 181 aa10.67□□□□□ -0.7
LTBR-215ENST00000546296 C9orf116Q5BN46 136 aaPredicted RBP10.66□□□□□ -0.7
LTBR-215ENST00000546296 PLAC8Q9NZF1 115 aa10.66□□□□□ -0.7
LTBR-215ENST00000546296 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.7
LTBR-215ENST00000546296 PLA2G1BP04054 148 aaKnown RBP10.65□□□□□ -0.7
LTBR-215ENST00000546296 TLX1NBP0CAT3 122 aa10.65□□□□□ -0.7
LTBR-215ENST00000546296 ODF1Q14990 250 aa10.65□□□□□ -0.7
LTBR-215ENST00000546296 GAGE2EQ4V326 116 aa10.65□□□□□ -0.7
LTBR-215ENST00000546296 GAGE2DQ9UEU5 116 aa10.65□□□□□ -0.7
LTBR-215ENST00000546296 Q6ZRP5 223 aa10.64□□□□□ -0.71
LTBR-215ENST00000546296 NDUFC2-KCTD14E9PQ53 114 aa10.63□□□□□ -0.71
LTBR-215ENST00000546296 COA6Q5JTJ3 125 aaKnown RBP10.63□□□□□ -0.71
LTBR-215ENST00000546296 FAT1Q14517 4588 aa10.63□□□□□ -0.71
LTBR-215ENST00000546296 TMEM223A0PJW6 202 aa10.62□□□□□ -0.71
LTBR-215ENST00000546296 PLNP26678 52 aa10.62□□□□□ -0.71
LTBR-215ENST00000546296 DPM2O94777 84 aa10.61□□□□□ -0.71
LTBR-215ENST00000546296 C7orf33Q8WU49 177 aa10.61□□□□□ -0.71
LTBR-215ENST00000546296 PMCHL2Q9BQD1 86 aa10.61□□□□□ -0.71
LTBR-215ENST00000546296 SRRM2Q9UQ35 2752 aaKnown RBP10.61□□□□□ -0.71
LTBR-215ENST00000546296 A0A1W2PNN7 141 aa10.6□□□□□ -0.71
LTBR-215ENST00000546296 RPL37AP61513 92 aaKnown RBP10.6□□□□□ -0.71
LTBR-215ENST00000546296 VPS13BQ7Z7G8 4022 aa10.59□□□□□ -0.71
LTBR-215ENST00000546296 SYS1-DBNDD2H3BUS1 97 aa10.58□□□□□ -0.72
LTBR-215ENST00000546296 IGKCP01834 107 aa10.58□□□□□ -0.72
LTBR-215ENST00000546296 ABCA13Q86UQ4 5058 aa10.58□□□□□ -0.72
LTBR-215ENST00000546296 INAFM2P0DMQ5 153 aa10.57□□□□□ -0.72
LTBR-215ENST00000546296 SFTA2Q6UW10 78 aa10.57□□□□□ -0.72
LTBR-215ENST00000546296 FAM168BA1KXE4 195 aa10.56□□□□□ -0.72
LTBR-215ENST00000546296 PFN2P35080 140 aa10.56□□□□□ -0.72
LTBR-215ENST00000546296 HERVK_113P61574 105 aa10.56□□□□□ -0.72
LTBR-215ENST00000546296 FAM19A5Q7Z5A7 132 aaPredicted RBP10.56□□□□□ -0.72
LTBR-215ENST00000546296 ZNF625Q96I27 306 aaPredicted RBP10.56□□□□□ -0.72
LTBR-215ENST00000546296 KRTDAPP60985 99 aa10.55□□□□□ -0.72
LTBR-215ENST00000546296 C9orf129Q5T035 196 aaKnown RBP10.55□□□□□ -0.72
LTBR-215ENST00000546296 PET117Q6UWS5 81 aa10.55□□□□□ -0.72
LTBR-215ENST00000546296 XAGE1AQ9HD64 81 aa10.55□□□□□ -0.72
LTBR-215ENST00000546296 S100A6P06703 90 aa10.54□□□□□ -0.72
LTBR-215ENST00000546296 C3orf79P0CE67 100 aa10.54□□□□□ -0.72
LTBR-215ENST00000546296 ERG28Q9UKR5 140 aa10.54□□□□□ -0.72
LTBR-215ENST00000546296 PCLOQ9Y6V0 5065 aa10.54□□□□□ -0.72
LTBR-215ENST00000546296 LEPROTO15243 131 aa10.53□□□□□ -0.72
LTBR-215ENST00000546296 PHF5AQ7RTV0 110 aaKnown RBP10.53□□□□□ -0.72
LTBR-215ENST00000546296 PLEKHB2Q96CS7 222 aa10.53□□□□□ -0.72
LTBR-215ENST00000546296 S100A2P29034 98 aa10.52□□□□□ -0.73
LTBR-215ENST00000546296 COX17Q14061 63 aa10.51□□□□□ -0.73
LTBR-215ENST00000546296 LINC01545Q5VT33 79 aa10.51□□□□□ -0.73
LTBR-215ENST00000546296 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
LTBR-215ENST00000546296 MYMXA0A1B0GTQ4 84 aa10.5□□□□□ -0.73
LTBR-215ENST00000546296 C20orf202A1L168 122 aa10.5□□□□□ -0.73
LTBR-215ENST00000546296 LINC00158P58513 81 aa10.5□□□□□ -0.73
LTBR-215ENST00000546296 KRTAP10-4P60372 401 aaPredicted RBP10.5□□□□□ -0.73
LTBR-215ENST00000546296 J3QQQ9 107 aa10.49□□□□□ -0.73
LTBR-215ENST00000546296 M0QXV9 152 aa10.49□□□□□ -0.73
LTBR-215ENST00000546296 HERV-K104P63124 156 aa10.49□□□□□ -0.73
LTBR-215ENST00000546296 HIST3H2BBQ8N257 126 aa10.49□□□□□ -0.73
LTBR-215ENST00000546296 A0A0U1RRA0 63 aa10.48□□□□□ -0.73
LTBR-215ENST00000546296 LGALS3P17931 250 aaKnown RBP10.48□□□□□ -0.73
LTBR-215ENST00000546296 MEIG1Q5JSS6 88 aa10.48□□□□□ -0.73
LTBR-215ENST00000546296 SERTAD4-AS1Q5TG53 156 aa10.48□□□□□ -0.73
LTBR-215ENST00000546296 TSPEAR-AS2P59090 65 aa10.47□□□□□ -0.73
LTBR-215ENST00000546296 PRR3P79522 188 aaKnown RBP10.47□□□□□ -0.73
LTBR-215ENST00000546296 KRTAP7-1Q8IUC3 87 aa10.47□□□□□ -0.73
LTBR-215ENST00000546296 C22orf24Q9Y442 160 aa10.47□□□□□ -0.73
LTBR-215ENST00000546296 LINC00587B1AMM8 73 aa10.46□□□□□ -0.73
LTBR-215ENST00000546296 SMIM13P0DJ93 91 aa10.46□□□□□ -0.73
LTBR-215ENST00000546296 UBE2BP63146 152 aa10.46□□□□□ -0.73
LTBR-215ENST00000546296 LBHQ53QV2 105 aaPredicted RBP10.46□□□□□ -0.73
LTBR-215ENST00000546296 HIST1H2BLQ99880 126 aa10.46□□□□□ -0.73
LTBR-215ENST00000546296 SND1-IT1Q9HBX3 110 aa10.46□□□□□ -0.73
LTBR-215ENST00000546296 E9PLD3 99 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms