RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 COX6A2Q02221 97 aa5.58□□□□□ -1.52
UBR1-202ENST00000546274 DEFB113Q30KQ7 82 aa5.58□□□□□ -1.52
UBR1-202ENST00000546274 ATP5EP2Q5VTU8 51 aa5.58□□□□□ -1.52
UBR1-202ENST00000546274 MRPL55Q7Z7F7 128 aaKnown RBP5.58□□□□□ -1.52
UBR1-202ENST00000546274 TM2D3Q9BRN9 247 aa5.58□□□□□ -1.52
UBR1-202ENST00000546274 UNC79Q9P2D8 2635 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 IGHV3-38A0A0C4DH36 116 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 DGAT2L7PQ6IED9 249 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 Q6ZSN1 163 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 OBSCN-AS1Q96MR7 158 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 ORMDL1Q9P0S3 153 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 SPG11Q96JI7 2443 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 CR1P17927 2039 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 A8MTW9 85 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 ZNF561-AS1K7EIQ3 104 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 ZNF702PQ9H963 129 aa5.57□□□□□ -1.52
UBR1-202ENST00000546274 PLAC8L1A1L4L8 177 aa5.56□□□□□ -1.52
UBR1-202ENST00000546274 KRTAP10-9P60411 292 aa5.56□□□□□ -1.52
UBR1-202ENST00000546274 OVOL2Q9BRP0 275 aa5.56□□□□□ -1.52
UBR1-202ENST00000546274 CUBNO60494 3623 aa5.56□□□□□ -1.52
UBR1-202ENST00000546274 C18orf65Q6ZTR6 163 aa5.56□□□□□ -1.52
UBR1-202ENST00000546274 PRR15Q8IV56 129 aa5.56□□□□□ -1.52
UBR1-202ENST00000546274 SND1-IT1Q9HBX3 110 aa5.56□□□□□ -1.52
UBR1-202ENST00000546274 ESRGQ1W209 222 aa5.56□□□□□ -1.52
UBR1-202ENST00000546274 UBE2E2Q96LR5 201 aa5.56□□□□□ -1.52
UBR1-202ENST00000546274 CHCHD7Q9BUK0 85 aa5.56□□□□□ -1.52
UBR1-202ENST00000546274 ANKRD17O75179 2603 aaKnown RBP5.56□□□□□ -1.52
UBR1-202ENST00000546274 PSPHP1O15172 72 aa5.55□□□□□ -1.52
UBR1-202ENST00000546274 LINC01356Q8N9X3 169 aa5.55□□□□□ -1.52
UBR1-202ENST00000546274 CREBBPQ92793 2442 aa5.55□□□□□ -1.52
UBR1-202ENST00000546274 CYSRT1A8MQ03 144 aa5.55□□□□□ -1.52
UBR1-202ENST00000546274 FSHBP01225 129 aa5.55□□□□□ -1.52
UBR1-202ENST00000546274 DSCR9P59020 149 aa5.55□□□□□ -1.52
UBR1-202ENST00000546274 SCXQ7RTU7 201 aa5.55□□□□□ -1.52
UBR1-202ENST00000546274 MAPK1IP1LQ8NDC0 245 aa5.55□□□□□ -1.52
UBR1-202ENST00000546274 SLURP1P55000 103 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 DEFB136Q30KP8 78 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 C6orf223Q8N319 242 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 IGKV2-28A0A075B6P5 120 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 H0YGX0 51 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 IGKV2D-28P01615 120 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 Q6YL49 198 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 Q6ZRU5 148 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 LINC00467Q9BRT7 94 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 FLNBO75369 2602 aaKnown RBP5.54□□□□□ -1.52
UBR1-202ENST00000546274 NDUFC1O43677 76 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 DEFB131AP59861 70 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 Q8N3U1 123 aa5.54□□□□□ -1.52
UBR1-202ENST00000546274 C11orf68Q9H3H3 251 aaKnown RBP5.54□□□□□ -1.52
UBR1-202ENST00000546274 LINC00158P58513 81 aa5.53□□□□□ -1.52
UBR1-202ENST00000546274 TOMM7Q9P0U1 55 aa5.53□□□□□ -1.52
UBR1-202ENST00000546274 NBPF19A0A087WUL8 3843 aa5.53□□□□□ -1.52
UBR1-202ENST00000546274 ATP5EP56381 51 aaPredicted RBP5.53□□□□□ -1.52
UBR1-202ENST00000546274 LINC01547P58512 204 aaPredicted RBP5.53□□□□□ -1.52
UBR1-202ENST00000546274 TMEM254Q8TBM7 123 aa5.53□□□□□ -1.52
UBR1-202ENST00000546274 SETXQ7Z333 2677 aaKnown RBP5.53□□□□□ -1.52
UBR1-202ENST00000546274 TEX15Q9BXT5 2789 aa5.53□□□□□ -1.52
UBR1-202ENST00000546274 CENPEQ02224 2701 aa5.52□□□□□ -1.53
UBR1-202ENST00000546274 TRBV10-3A0A0K0K1G6 114 aa5.52□□□□□ -1.53
UBR1-202ENST00000546274 PF4P02776 101 aa5.52□□□□□ -1.53
UBR1-202ENST00000546274 PRB2P02812 416 aaPredicted RBP5.52□□□□□ -1.53
UBR1-202ENST00000546274 FUSP35637 526 aaKnown RBP eCLIP5.52□□□□□ -1.53
UBR1-202ENST00000546274 SMIM1B2RUZ4 78 aa5.51□□□□□ -1.53
UBR1-202ENST00000546274 NOTCH3Q9UM47 2321 aa5.51□□□□□ -1.53
UBR1-202ENST00000546274 A8MU10 97 aa5.51□□□□□ -1.53
UBR1-202ENST00000546274 JMJD7-PLA2G4BH0Y9G9 81 aa5.51□□□□□ -1.53
UBR1-202ENST00000546274 LINC00242Q5T6M2 205 aa5.51□□□□□ -1.53
UBR1-202ENST00000546274 MAP6D1Q9H9H5 199 aa5.51□□□□□ -1.53
UBR1-202ENST00000546274 POLQO75417 2590 aa5.51□□□□□ -1.53
UBR1-202ENST00000546274 IGHV3-53P01767 116 aa5.51□□□□□ -1.53
UBR1-202ENST00000546274 C11orf45Q8TAV5 145 aa5.51□□□□□ -1.53
UBR1-202ENST00000546274 APCP25054 2843 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 IGHV3OR16-12A0A075B7B8 117 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 IGLV5-45A0A087WSX0 123 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 IGLV5-39A0A0G2JS06 123 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 M0R2N4 97 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 NREPQ16612 68 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 STHQ8IWL8 128 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 RBM12B-AS1Q9P1G2 102 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 TRBV7-4A0A0J9YYF1 115 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 IBA57-AS1B1ANH7 110 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 IGHV4-31P0DP07 118 aa5.5□□□□□ -1.53
UBR1-202ENST00000546274 TRBV10-1A0A0K0K1A3 114 aa5.49□□□□□ -1.53
UBR1-202ENST00000546274 PDZD2O15018 2839 aa5.49□□□□□ -1.53
UBR1-202ENST00000546274 IGKV3OR2-268A0A0C4DH90 116 aa5.49□□□□□ -1.53
UBR1-202ENST00000546274 Q6ZVQ6 151 aa5.49□□□□□ -1.53
UBR1-202ENST00000546274 C1orf158Q8N1D5 194 aa5.49□□□□□ -1.53
UBR1-202ENST00000546274 LAMTOR3Q9UHA4 124 aa5.49□□□□□ -1.53
UBR1-202ENST00000546274 BCE1O60756 84 aa5.48□□□□□ -1.53
UBR1-202ENST00000546274 CCL18P55774 89 aa5.48□□□□□ -1.53
UBR1-202ENST00000546274 KRTAP1-3Q8IUG1 177 aa5.48□□□□□ -1.53
UBR1-202ENST00000546274 C4orf3Q8WVX3 66 aa5.48□□□□□ -1.53
UBR1-202ENST00000546274 DEFB114Q30KQ6 69 aa5.48□□□□□ -1.53
UBR1-202ENST00000546274 NIPBLQ6KC79 2804 aaeCLIP5.48□□□□□ -1.53
UBR1-202ENST00000546274 ITPR2Q14571 2701 aa5.48□□□□□ -1.53
UBR1-202ENST00000546274 TMEM256-PLSCR3K7ERE1 68 aa5.47□□□□□ -1.53
UBR1-202ENST00000546274 PRYO14603 147 aa5.47□□□□□ -1.53
UBR1-202ENST00000546274 ABCA12Q86UK0 2595 aa5.47□□□□□ -1.53
UBR1-202ENST00000546274 INSP01308 110 aa5.47□□□□□ -1.53
UBR1-202ENST00000546274 ODF3L2Q3SX64 289 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms