RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 NDUFA1O15239 70 aa8.78□□□□□ -1
SP140-213ENST00000543928 LORP23490 312 aaPredicted RBP8.78□□□□□ -1
SP140-213ENST00000543928 Q8IZM0 81 aa8.78□□□□□ -1
SP140-213ENST00000543928 C6orf226Q5I0X4 101 aa8.77□□□□□ -1.01
SP140-213ENST00000543928 C10orf25Q5T742 122 aa8.77□□□□□ -1.01
SP140-213ENST00000543928 C2orf82Q6UX34 121 aa8.77□□□□□ -1.01
SP140-213ENST00000543928 UNQ6190/PRO20217Q6UXQ8 127 aa8.77□□□□□ -1.01
SP140-213ENST00000543928 SDIM1Q6ZPB5 146 aa8.77□□□□□ -1.01
SP140-213ENST00000543928 HIST3H2BBQ8N257 126 aa8.77□□□□□ -1.01
SP140-213ENST00000543928 COX7B2Q8TF08 81 aa8.77□□□□□ -1.01
SP140-213ENST00000543928 PMCHL2Q9BQD1 86 aa8.77□□□□□ -1.01
SP140-213ENST00000543928 APOBP04114 4563 aaKnown RBP8.77□□□□□ -1.01
SP140-213ENST00000543928 IGLV5-39A0A0G2JS06 123 aa8.76□□□□□ -1.01
SP140-213ENST00000543928 S100A2P29034 98 aa8.76□□□□□ -1.01
SP140-213ENST00000543928 CKS1BP61024 79 aa8.76□□□□□ -1.01
SP140-213ENST00000543928 FAM30AQ9NZY2 134 aa8.76□□□□□ -1.01
SP140-213ENST00000543928 DPM2O94777 84 aa8.75□□□□□ -1.01
SP140-213ENST00000543928 C3orf79P0CE67 100 aa8.75□□□□□ -1.01
SP140-213ENST00000543928 PLNP26678 52 aa8.75□□□□□ -1.01
SP140-213ENST00000543928 KRTDAPP60985 99 aa8.75□□□□□ -1.01
SP140-213ENST00000543928 SNRPEP62304 92 aaKnown RBP8.75□□□□□ -1.01
SP140-213ENST00000543928 PET117Q6UWS5 81 aa8.75□□□□□ -1.01
SP140-213ENST00000543928 TMEM223A0PJW6 202 aa8.74□□□□□ -1.01
SP140-213ENST00000543928 IGKCP01834 107 aa8.74□□□□□ -1.01
SP140-213ENST00000543928 RNF151Q2KHN1 245 aa8.74□□□□□ -1.01
SP140-213ENST00000543928 Q6ZSA8 131 aa8.74□□□□□ -1.01
SP140-213ENST00000543928 HIST1H2BLQ99880 126 aa8.74□□□□□ -1.01
SP140-213ENST00000543928 C6orf48Q9UBA6 75 aa8.74□□□□□ -1.01
SP140-213ENST00000543928 CDK2AP2O75956 126 aa8.73□□□□□ -1.01
SP140-213ENST00000543928 CXCL5P42830 114 aa8.73□□□□□ -1.01
SP140-213ENST00000543928 LINC01545Q5VT33 79 aa8.73□□□□□ -1.01
SP140-213ENST00000543928 PKIGQ9Y2B9 76 aa8.73□□□□□ -1.01
SP140-213ENST00000543928 TRBV30A0A0K0K1B3 111 aa8.72□□□□□ -1.01
SP140-213ENST00000543928 LOC107984640A0A0U1RRK4 108 aa8.72□□□□□ -1.01
SP140-213ENST00000543928 C5orf52A6NGY3 159 aa8.72□□□□□ -1.01
SP140-213ENST00000543928 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
SP140-213ENST00000543928 CHTF8P0CG12 524 aa8.72□□□□□ -1.01
SP140-213ENST00000543928 HAMPP81172 84 aa8.72□□□□□ -1.01
SP140-213ENST00000543928 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.72□□□□□ -1.01
SP140-213ENST00000543928 A0A096LNI7 61 aa8.71□□□□□ -1.02
SP140-213ENST00000543928 IGKV2-24A0A0C4DH68 120 aa8.71□□□□□ -1.02
SP140-213ENST00000543928 PANO1I0J062 215 aa8.71□□□□□ -1.02
SP140-213ENST00000543928 XGP55808 180 aa8.71□□□□□ -1.02
SP140-213ENST00000543928 TMA7Q9Y2S6 64 aaKnown RBP8.71□□□□□ -1.02
SP140-213ENST00000543928 RPL18AQ02543 176 aaKnown RBP8.7□□□□□ -1.02
SP140-213ENST00000543928 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
SP140-213ENST00000543928 HSPG2P98160 4391 aa8.7□□□□□ -1.02
SP140-213ENST00000543928 C20orf202A1L168 122 aa8.69□□□□□ -1.02
SP140-213ENST00000543928 HERVK_113P61574 105 aa8.69□□□□□ -1.02
SP140-213ENST00000543928 GAGE2BQ13066 116 aa8.69□□□□□ -1.02
SP140-213ENST00000543928 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
SP140-213ENST00000543928 RYR1P21817 5038 aa8.68□□□□□ -1.02
SP140-213ENST00000543928 TLX1NBP0CAT3 122 aa8.68□□□□□ -1.02
SP140-213ENST00000543928 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
SP140-213ENST00000543928 CIRBPQ14011 172 aaKnown RBP8.68□□□□□ -1.02
SP140-213ENST00000543928 MAJINQ3KP22 176 aa8.68□□□□□ -1.02
SP140-213ENST00000543928 SCXQ7RTU7 201 aa8.68□□□□□ -1.02
SP140-213ENST00000543928 SPACA4Q8TDM5 124 aa8.68□□□□□ -1.02
SP140-213ENST00000543928 DPH3Q96FX2 82 aa8.68□□□□□ -1.02
SP140-213ENST00000543928 CIRBP-AS1Q8TBR5 109 aa8.67□□□□□ -1.02
SP140-213ENST00000543928 NDUFC2-KCTD14E9PQ53 114 aa8.66□□□□□ -1.02
SP140-213ENST00000543928 LEPROTO15243 131 aa8.66□□□□□ -1.02
SP140-213ENST00000543928 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
SP140-213ENST00000543928 Q6ZRP5 223 aa8.66□□□□□ -1.02
SP140-213ENST00000543928 PLEKHB2Q96CS7 222 aa8.66□□□□□ -1.02
SP140-213ENST00000543928 ZNF625Q96I27 306 aaPredicted RBP8.66□□□□□ -1.02
SP140-213ENST00000543928 LINC00474Q9P2X8 69 aa8.66□□□□□ -1.02
SP140-213ENST00000543928 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
SP140-213ENST00000543928 A0A087WYN8 130 aa8.65□□□□□ -1.02
SP140-213ENST00000543928 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.02
SP140-213ENST00000543928 SFTA2Q6UW10 78 aa8.65□□□□□ -1.02
SP140-213ENST00000543928 J3QQQ9 107 aa8.64□□□□□ -1.03
SP140-213ENST00000543928 ATOH7Q8N100 152 aa8.64□□□□□ -1.03
SP140-213ENST00000543928 STPG4Q8N801 248 aa8.64□□□□□ -1.03
SP140-213ENST00000543928 E9PLD3 99 aa8.63□□□□□ -1.03
SP140-213ENST00000543928 AKR1D1P51857 326 aa8.63□□□□□ -1.03
SP140-213ENST00000543928 NDUFA12Q9UI09 145 aa8.63□□□□□ -1.03
SP140-213ENST00000543928 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
SP140-213ENST00000543928 LGALS3P17931 250 aaKnown RBP8.62□□□□□ -1.03
SP140-213ENST00000543928 PFN2P35080 140 aa8.62□□□□□ -1.03
SP140-213ENST00000543928 PLAC8Q9NZF1 115 aa8.62□□□□□ -1.03
SP140-213ENST00000543928 ERG28Q9UKR5 140 aa8.62□□□□□ -1.03
SP140-213ENST00000543928 MYMXA0A1B0GTQ4 84 aa8.61□□□□□ -1.03
SP140-213ENST00000543928 C9orf129Q5T035 196 aaKnown RBP8.61□□□□□ -1.03
SP140-213ENST00000543928 XAGE1AQ9HD64 81 aa8.61□□□□□ -1.03
SP140-213ENST00000543928 HERC2O95714 4834 aa8.6□□□□□ -1.03
SP140-213ENST00000543928 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
SP140-213ENST00000543928 NMUP48645 174 aa8.6□□□□□ -1.03
SP140-213ENST00000543928 HERV-K104P63124 156 aa8.6□□□□□ -1.03
SP140-213ENST00000543928 COX17Q14061 63 aa8.6□□□□□ -1.03
SP140-213ENST00000543928 FAT1Q14517 4588 aa8.59□□□□□ -1.03
SP140-213ENST00000543928 IGKV2D-26A0A0A0MRZ7 120 aa8.59□□□□□ -1.03
SP140-213ENST00000543928 FAM168BA1KXE4 195 aa8.59□□□□□ -1.03
SP140-213ENST00000543928 FAM229AH3BQW9 127 aa8.59□□□□□ -1.03
SP140-213ENST00000543928 SCGB1D1O95968 90 aa8.59□□□□□ -1.03
SP140-213ENST00000543928 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
SP140-213ENST00000543928 MEIG1Q5JSS6 88 aa8.59□□□□□ -1.03
SP140-213ENST00000543928 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
SP140-213ENST00000543928 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
SP140-213ENST00000543928 LINC00158P58513 81 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms