RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 A0A1B0GX51 115 aa9.59□□□□□ -0.87
VPS33A-208ENST00000543633 HIST1H4AP62805 103 aaKnown RBP9.59□□□□□ -0.87
VPS33A-208ENST00000543633 Q8IZM0 81 aa9.58□□□□□ -0.88
VPS33A-208ENST00000543633 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
VPS33A-208ENST00000543633 KLK5Q9Y337 293 aaPredicted RBP9.58□□□□□ -0.88
VPS33A-208ENST00000543633 CUBNO60494 3623 aa9.58□□□□□ -0.88
VPS33A-208ENST00000543633 A0A1B0GUV1 79 aa9.58□□□□□ -0.88
VPS33A-208ENST00000543633 Q6JHZ5 121 aa9.58□□□□□ -0.88
VPS33A-208ENST00000543633 RPL35AP18077 110 aaKnown RBP9.57□□□□□ -0.88
VPS33A-208ENST00000543633 LINC00526Q96FQ7 95 aa9.57□□□□□ -0.88
VPS33A-208ENST00000543633 SMR3AQ99954 134 aa9.57□□□□□ -0.88
VPS33A-208ENST00000543633 ATOX1O00244 68 aa9.56□□□□□ -0.88
VPS33A-208ENST00000543633 ESM1Q9NQ30 184 aa9.56□□□□□ -0.88
VPS33A-208ENST00000543633 IGKV3OR2-268A0A0C4DH90 116 aa9.56□□□□□ -0.88
VPS33A-208ENST00000543633 PAX4O43316 350 aa9.56□□□□□ -0.88
VPS33A-208ENST00000543633 SS18Q15532 418 aa9.56□□□□□ -0.88
VPS33A-208ENST00000543633 LINC00167Q96N53 147 aa9.56□□□□□ -0.88
VPS33A-208ENST00000543633 RNASE1P07998 156 aaKnown RBP9.55□□□□□ -0.88
VPS33A-208ENST00000543633 C9orf153Q5TBE3 101 aa9.55□□□□□ -0.88
VPS33A-208ENST00000543633 LECT2O14960 151 aa9.55□□□□□ -0.88
VPS33A-208ENST00000543633 C6orf226Q5I0X4 101 aa9.55□□□□□ -0.88
VPS33A-208ENST00000543633 LINC01006Q8NI28 216 aa9.55□□□□□ -0.88
VPS33A-208ENST00000543633 WFDC10AQ9H1F0 79 aa9.55□□□□□ -0.88
VPS33A-208ENST00000543633 ORMDL1Q9P0S3 153 aa9.55□□□□□ -0.88
VPS33A-208ENST00000543633 NDUFC2O95298 119 aa9.54□□□□□ -0.88
VPS33A-208ENST00000543633 COX7CP15954 63 aa9.54□□□□□ -0.88
VPS33A-208ENST00000543633 PFN2P35080 140 aa9.54□□□□□ -0.88
VPS33A-208ENST00000543633 NF1P21359 2839 aa9.53□□□□□ -0.88
VPS33A-208ENST00000543633 SMIM20Q8N5G0 67 aa9.53□□□□□ -0.88
VPS33A-208ENST00000543633 C14orf132Q9NPU4 83 aa9.53□□□□□ -0.88
VPS33A-208ENST00000543633 COX17Q14061 63 aa9.52□□□□□ -0.89
VPS33A-208ENST00000543633 OR13C6PQ8NH95 151 aa9.52□□□□□ -0.89
VPS33A-208ENST00000543633 MTORP42345 2549 aa9.52□□□□□ -0.89
VPS33A-208ENST00000543633 FLNBO75369 2602 aaKnown RBP9.51□□□□□ -0.89
VPS33A-208ENST00000543633 HIVEP1P15822 2718 aa9.51□□□□□ -0.89
VPS33A-208ENST00000543633 JMJD7-PLA2G4BH0Y9G9 81 aa9.51□□□□□ -0.89
VPS33A-208ENST00000543633 CRYGAP11844 174 aa9.51□□□□□ -0.89
VPS33A-208ENST00000543633 RPL18AQ02543 176 aaKnown RBP9.51□□□□□ -0.89
VPS33A-208ENST00000543633 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
VPS33A-208ENST00000543633 S100A7L2Q5SY68 101 aa9.5□□□□□ -0.89
VPS33A-208ENST00000543633 C9orf129Q5T035 196 aaKnown RBP9.5□□□□□ -0.89
VPS33A-208ENST00000543633 C2orf48Q96LS8 159 aa9.5□□□□□ -0.89
VPS33A-208ENST00000543633 GYPEP15421 78 aa9.49□□□□□ -0.89
VPS33A-208ENST00000543633 ATP5EP2Q5VTU8 51 aa9.49□□□□□ -0.89
VPS33A-208ENST00000543633 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
VPS33A-208ENST00000543633 HIVEP2P31629 2446 aa9.49□□□□□ -0.89
VPS33A-208ENST00000543633 CCKP06307 115 aa9.49□□□□□ -0.89
VPS33A-208ENST00000543633 LINC00846Q9NV44 126 aa9.49□□□□□ -0.89
VPS33A-208ENST00000543633 PRO0255Q9UI72 69 aa9.49□□□□□ -0.89
VPS33A-208ENST00000543633 BAHCC1Q9P281 2608 aa9.49□□□□□ -0.89
VPS33A-208ENST00000543633 XCL1P47992 114 aa9.48□□□□□ -0.89
VPS33A-208ENST00000543633 IGHV4-28A0A0C4DH34 117 aa9.48□□□□□ -0.89
VPS33A-208ENST00000543633 CD164L2Q6UWJ8 174 aa9.47□□□□□ -0.89
VPS33A-208ENST00000543633 TMEM256-PLSCR3K7ERE1 68 aa9.46□□□□□ -0.89
VPS33A-208ENST00000543633 NCR3O14931 201 aa9.46□□□□□ -0.89
VPS33A-208ENST00000543633 DEFB130BP0DP73 79 aa9.46□□□□□ -0.89
VPS33A-208ENST00000543633 DEFB130AP0DP74 79 aa9.46□□□□□ -0.89
VPS33A-208ENST00000543633 NANOS2P60321 138 aaKnown RBP9.46□□□□□ -0.89
VPS33A-208ENST00000543633 NSD1Q96L73 2696 aaPredicted RBP9.46□□□□□ -0.89
VPS33A-208ENST00000543633 HILS1P60008 231 aa9.46□□□□□ -0.9
VPS33A-208ENST00000543633 KIAA0087Q14695 138 aa9.46□□□□□ -0.9
VPS33A-208ENST00000543633 Q8N814 137 aa9.46□□□□□ -0.9
VPS33A-208ENST00000543633 LYRM9A8MSI8 78 aa9.45□□□□□ -0.9
VPS33A-208ENST00000543633 C11orf68Q9H3H3 251 aaKnown RBP9.45□□□□□ -0.9
VPS33A-208ENST00000543633 X6R8D5 127 aa9.44□□□□□ -0.9
VPS33A-208ENST00000543633 SLPIP03973 132 aa9.43□□□□□ -0.9
VPS33A-208ENST00000543633 SERP2Q8N6R1 65 aa9.43□□□□□ -0.9
VPS33A-208ENST00000543633 WNK1Q9H4A3 2382 aa9.43□□□□□ -0.9
VPS33A-208ENST00000543633 IGKV3D-7A0A0C4DH55 119 aa9.43□□□□□ -0.9
VPS33A-208ENST00000543633 INAFM1C9JVW0 142 aa9.43□□□□□ -0.9
VPS33A-208ENST00000543633 C3orf56Q8N813 242 aa9.42□□□□□ -0.9
VPS33A-208ENST00000543633 FN1P02751 2386 aaKnown RBP9.42□□□□□ -0.9
VPS33A-208ENST00000543633 NOTCH3Q9UM47 2321 aa9.42□□□□□ -0.9
VPS33A-208ENST00000543633 TRBV10-3A0A0K0K1G6 114 aa9.41□□□□□ -0.9
VPS33A-208ENST00000543633 CHCHD10Q8WYQ3 142 aaPredicted RBP9.41□□□□□ -0.9
VPS33A-208ENST00000543633 SETXQ7Z333 2677 aaKnown RBP9.41□□□□□ -0.9
VPS33A-208ENST00000543633 LYPD5Q6UWN5 251 aa9.41□□□□□ -0.9
VPS33A-208ENST00000543633 USP17L23D6RBM5 183 aa9.4□□□□□ -0.9
VPS33A-208ENST00000543633 H3BQ85 93 aa9.4□□□□□ -0.9
VPS33A-208ENST00000543633 J3KT08 172 aa9.39□□□□□ -0.91
VPS33A-208ENST00000543633 CLPSL2Q6UWE3 100 aa9.39□□□□□ -0.91
VPS33A-208ENST00000543633 LINC00482Q8N8I6 264 aa9.39□□□□□ -0.91
VPS33A-208ENST00000543633 RPS28P62857 69 aaKnown RBP9.39□□□□□ -0.91
VPS33A-208ENST00000543633 LINC00269Q8N2A0 174 aa9.39□□□□□ -0.91
VPS33A-208ENST00000543633 TMEM258P61165 79 aa9.38□□□□□ -0.91
VPS33A-208ENST00000543633 REG3AQ06141 175 aa9.38□□□□□ -0.91
VPS33A-208ENST00000543633 hADV29S1A0JD25 119 aa9.38□□□□□ -0.91
VPS33A-208ENST00000543633 LINC00575Q6W349 94 aa9.38□□□□□ -0.91
VPS33A-208ENST00000543633 UPK3BQ9BT76 320 aa9.38□□□□□ -0.91
VPS33A-208ENST00000543633 CYSRT1A8MQ03 144 aa9.37□□□□□ -0.91
VPS33A-208ENST00000543633 LOC110117498A0A087WWA1 95 aa9.36□□□□□ -0.91
VPS33A-208ENST00000543633 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
VPS33A-208ENST00000543633 ANGP03950 147 aaKnown RBP9.36□□□□□ -0.91
VPS33A-208ENST00000543633 C6orf99Q4VX62 202 aa9.36□□□□□ -0.91
VPS33A-208ENST00000543633 UBL5Q9BZL1 73 aa9.36□□□□□ -0.91
VPS33A-208ENST00000543633 C2CD3Q4AC94 2353 aa9.36□□□□□ -0.91
VPS33A-208ENST00000543633 F8P00451 2351 aa9.36□□□□□ -0.91
VPS33A-208ENST00000543633 A0A087WVE0 104 aa9.35□□□□□ -0.91
VPS33A-208ENST00000543633 A0A0J9YWU9 116 aa9.35□□□□□ -0.91
VPS33A-208ENST00000543633 BCE1O60756 84 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms