RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 C14orf177Q52M58 125 aa7.02□□□□□ -1.29
DDB1-221ENST00000543162 C2orf82Q6UX34 121 aa7.02□□□□□ -1.29
DDB1-221ENST00000543162 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
DDB1-221ENST00000543162 UQCR10Q9UDW1 63 aa7.02□□□□□ -1.29
DDB1-221ENST00000543162 TP73-AS1Q9UF72 201 aa7.02□□□□□ -1.29
DDB1-221ENST00000543162 LRCOL1A6NCL2 159 aa7.01□□□□□ -1.29
DDB1-221ENST00000543162 F8WDY8 70 aa7.01□□□□□ -1.29
DDB1-221ENST00000543162 SCGB1D4Q6XE38 83 aa7.01□□□□□ -1.29
DDB1-221ENST00000543162 CAMK2N2Q96S95 79 aa7.01□□□□□ -1.29
DDB1-221ENST00000543162 MIEN1Q9BRT3 115 aa7.01□□□□□ -1.29
DDB1-221ENST00000543162 A0A0J9YXY3 114 aa7□□□□□ -1.29
DDB1-221ENST00000543162 UNQ6190/PRO20217Q6UXQ8 127 aa7□□□□□ -1.29
DDB1-221ENST00000543162 A0A087WTM6 91 aa6.99□□□□□ -1.29
DDB1-221ENST00000543162 SYCNQ0VAF6 134 aa6.99□□□□□ -1.29
DDB1-221ENST00000543162 C10orf25Q5T742 122 aa6.99□□□□□ -1.29
DDB1-221ENST00000543162 LINC00587B1AMM8 73 aa6.98□□□□□ -1.29
DDB1-221ENST00000543162 RTL8CO15255 209 aa6.98□□□□□ -1.29
DDB1-221ENST00000543162 HNRNPA3P51991 378 aaKnown RBP6.98□□□□□ -1.29
DDB1-221ENST00000543162 CIRBPQ14011 172 aaKnown RBP6.98□□□□□ -1.29
DDB1-221ENST00000543162 MEIG1Q5JSS6 88 aa6.98□□□□□ -1.29
DDB1-221ENST00000543162 Q6ZRU5 148 aa6.98□□□□□ -1.29
DDB1-221ENST00000543162 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.97□□□□□ -1.29
DDB1-221ENST00000543162 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
DDB1-221ENST00000543162 EREGO14944 169 aa6.97□□□□□ -1.29
DDB1-221ENST00000543162 TIMM17BO60830 172 aa6.97□□□□□ -1.29
DDB1-221ENST00000543162 C2orf91Q6ZV80 131 aa6.97□□□□□ -1.29
DDB1-221ENST00000543162 Q8N814 137 aa6.97□□□□□ -1.29
DDB1-221ENST00000543162 CARD19Q96LW7 228 aa6.97□□□□□ -1.29
DDB1-221ENST00000543162 HIGD1BQ9P298 99 aa6.97□□□□□ -1.29
DDB1-221ENST00000543162 C6orf48Q9UBA6 75 aa6.97□□□□□ -1.29
DDB1-221ENST00000543162 ERG28Q9UKR5 140 aa6.97□□□□□ -1.29
DDB1-221ENST00000543162 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.96□□□□□ -1.3
DDB1-221ENST00000543162 A0A0U1RRA0 63 aa6.96□□□□□ -1.3
DDB1-221ENST00000543162 TMEM238C9JI98 176 aa6.96□□□□□ -1.3
DDB1-221ENST00000543162 SLPIP03973 132 aa6.96□□□□□ -1.3
DDB1-221ENST00000543162 SMIM13P0DJ93 91 aa6.96□□□□□ -1.3
DDB1-221ENST00000543162 PFN2P35080 140 aa6.96□□□□□ -1.3
DDB1-221ENST00000543162 LINC00158P58513 81 aa6.96□□□□□ -1.3
DDB1-221ENST00000543162 CNBPP62633 177 aaKnown RBP6.96□□□□□ -1.3
DDB1-221ENST00000543162 TNP2Q05952 138 aa6.96□□□□□ -1.3
DDB1-221ENST00000543162 C9orf116Q5BN46 136 aaPredicted RBP6.96□□□□□ -1.3
DDB1-221ENST00000543162 DDTP30046 118 aa6.95□□□□□ -1.3
DDB1-221ENST00000543162 COX17Q14061 63 aa6.95□□□□□ -1.3
DDB1-221ENST00000543162 RNF151Q2KHN1 245 aa6.95□□□□□ -1.3
DDB1-221ENST00000543162 DNAH6Q9C0G6 4158 aa6.94□□□□□ -1.3
DDB1-221ENST00000543162 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
DDB1-221ENST00000543162 PCP4L1A6NKN8 68 aa6.94□□□□□ -1.3
DDB1-221ENST00000543162 SRSF9Q13242 221 aaKnown RBP eCLIP6.94□□□□□ -1.3
DDB1-221ENST00000543162 ADAMTSL4-AS1Q5T5F5 129 aa6.94□□□□□ -1.3
DDB1-221ENST00000543162 HIST1H4GQ99525 98 aa6.94□□□□□ -1.3
DDB1-221ENST00000543162 LITAFQ99732 161 aa6.94□□□□□ -1.3
DDB1-221ENST00000543162 KMT2AQ03164 3969 aa6.93□□□□□ -1.3
DDB1-221ENST00000543162 DAND5Q8N907 189 aa6.93□□□□□ -1.3
DDB1-221ENST00000543162 SPANXB1Q9NS25 103 aaPredicted RBP6.93□□□□□ -1.3
DDB1-221ENST00000543162 CTAG1AP78358 180 aa6.92□□□□□ -1.3
DDB1-221ENST00000543162 Q6ZVH6 145 aa6.92□□□□□ -1.3
DDB1-221ENST00000543162 MIR7-3HGQ8N6C7 128 aa6.92□□□□□ -1.3
DDB1-221ENST00000543162 SPANXDQ9BXN6 97 aa6.92□□□□□ -1.3
DDB1-221ENST00000543162 SPANXCQ9NY87 97 aa6.92□□□□□ -1.3
DDB1-221ENST00000543162 NDUFC2-KCTD14E9PQ53 114 aa6.91□□□□□ -1.3
DDB1-221ENST00000543162 HSD52Q0P140 79 aa6.91□□□□□ -1.3
DDB1-221ENST00000543162 TAL2Q16559 108 aa6.91□□□□□ -1.3
DDB1-221ENST00000543162 LINC00336Q6ZUF6 198 aa6.91□□□□□ -1.3
DDB1-221ENST00000543162 LOC107984640A0A0U1RRK4 108 aa6.9□□□□□ -1.3
DDB1-221ENST00000543162 TLX1NBP0CAT3 122 aa6.9□□□□□ -1.3
DDB1-221ENST00000543162 IFITM1P13164 125 aa6.9□□□□□ -1.3
DDB1-221ENST00000543162 GCSHP23434 173 aa6.9□□□□□ -1.3
DDB1-221ENST00000543162 NPC2P61916 151 aa6.9□□□□□ -1.3
DDB1-221ENST00000543162 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.3
DDB1-221ENST00000543162 C9orf163Q8N9P6 203 aa6.9□□□□□ -1.3
DDB1-221ENST00000543162 COPS9Q8WXC6 57 aa6.9□□□□□ -1.3
DDB1-221ENST00000543162 SND1-IT1Q9HBX3 110 aa6.9□□□□□ -1.3
DDB1-221ENST00000543162 PKIGQ9Y2B9 76 aa6.9□□□□□ -1.3
DDB1-221ENST00000543162 IGLV5-52A0A0A0MRZ9 124 aa6.89□□□□□ -1.31
DDB1-221ENST00000543162 GAGE2EQ4V326 116 aa6.89□□□□□ -1.31
DDB1-221ENST00000543162 Q6ZRP5 223 aa6.89□□□□□ -1.31
DDB1-221ENST00000543162 MUSTN1Q8IVN3 82 aa6.89□□□□□ -1.31
DDB1-221ENST00000543162 CEND1Q8N111 149 aa6.89□□□□□ -1.31
DDB1-221ENST00000543162 LINC00308Q8TCZ7 52 aa6.89□□□□□ -1.31
DDB1-221ENST00000543162 GAGE2DQ9UEU5 116 aa6.89□□□□□ -1.31
DDB1-221ENST00000543162 DNAH10Q8IVF4 4471 aa6.88□□□□□ -1.31
DDB1-221ENST00000543162 FUSP35637 526 aaKnown RBP eCLIP6.88□□□□□ -1.31
DDB1-221ENST00000543162 PTTG1IPP53801 180 aa6.88□□□□□ -1.31
DDB1-221ENST00000543162 GAGE2BQ13066 116 aa6.88□□□□□ -1.31
DDB1-221ENST00000543162 LINC01620Q4KN68 170 aa6.88□□□□□ -1.31
DDB1-221ENST00000543162 XAGE1AQ9HD64 81 aa6.88□□□□□ -1.31
DDB1-221ENST00000543162 A6NJY4 79 aa6.87□□□□□ -1.31
DDB1-221ENST00000543162 M0R143 59 aa6.87□□□□□ -1.31
DDB1-221ENST00000543162 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
DDB1-221ENST00000543162 HINT1P49773 126 aaPredicted RBP6.87□□□□□ -1.31
DDB1-221ENST00000543162 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
DDB1-221ENST00000543162 SOSTDC1Q6X4U4 206 aa6.87□□□□□ -1.31
DDB1-221ENST00000543162 PGPEP1Q9NXJ5 209 aa6.87□□□□□ -1.31
DDB1-221ENST00000543162 SACSQ9NZJ4 4579 aa6.87□□□□□ -1.31
DDB1-221ENST00000543162 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
DDB1-221ENST00000543162 LOC107984156A0A0G2JMH3 177 aa6.86□□□□□ -1.31
DDB1-221ENST00000543162 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
DDB1-221ENST00000543162 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
DDB1-221ENST00000543162 ARL17AQ8IVW1 177 aa6.86□□□□□ -1.31
DDB1-221ENST00000543162 PPDPFQ9H3Y8 114 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 234.7 ms