RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 LINC00959A0A1B0GUT2 108 aa11.47□□□□□ -0.57
RAP1B-227ENST00000542018 PRR26Q8N8Z3 221 aa11.47□□□□□ -0.57
RAP1B-227ENST00000542018 VCX2Q9H322 139 aa11.47□□□□□ -0.57
RAP1B-227ENST00000542018 SYCNQ0VAF6 134 aa11.46□□□□□ -0.57
RAP1B-227ENST00000542018 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.57
RAP1B-227ENST00000542018 PKIGQ9Y2B9 76 aa11.46□□□□□ -0.57
RAP1B-227ENST00000542018 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
RAP1B-227ENST00000542018 RNASE13Q5GAN3 156 aaKnown RBP11.45□□□□□ -0.58
RAP1B-227ENST00000542018 LINC00173Q6ZV60 143 aa11.45□□□□□ -0.58
RAP1B-227ENST00000542018 PACRGQ96M98 296 aaPredicted RBP11.45□□□□□ -0.58
RAP1B-227ENST00000542018 LEPROTL1O95214 131 aa11.44□□□□□ -0.58
RAP1B-227ENST00000542018 SS18Q15532 418 aa11.44□□□□□ -0.58
RAP1B-227ENST00000542018 C2orf88Q9BSF0 95 aa11.44□□□□□ -0.58
RAP1B-227ENST00000542018 HSPB8Q9UJY1 196 aa11.44□□□□□ -0.58
RAP1B-227ENST00000542018 IFITM10A6NMD0 228 aa11.43□□□□□ -0.58
RAP1B-227ENST00000542018 S100A6P06703 90 aa11.43□□□□□ -0.58
RAP1B-227ENST00000542018 PMVKQ15126 192 aa11.43□□□□□ -0.58
RAP1B-227ENST00000542018 IFI27L1Q96BM0 104 aa11.43□□□□□ -0.58
RAP1B-227ENST00000542018 LOC107984640A0A0U1RRK4 108 aa11.42□□□□□ -0.58
RAP1B-227ENST00000542018 FAM19A3Q7Z5A8 133 aa11.42□□□□□ -0.58
RAP1B-227ENST00000542018 CST9LQ9H4G1 147 aa11.42□□□□□ -0.58
RAP1B-227ENST00000542018 IGLV4-69A0A075B6H9 119 aa11.41□□□□□ -0.58
RAP1B-227ENST00000542018 TRAV13-1A0A0B4J241 112 aa11.41□□□□□ -0.58
RAP1B-227ENST00000542018 ZNF561-AS1K7EIQ3 104 aa11.41□□□□□ -0.58
RAP1B-227ENST00000542018 UBE2D1P51668 147 aa11.41□□□□□ -0.58
RAP1B-227ENST00000542018 C9orf116Q5BN46 136 aaPredicted RBP11.41□□□□□ -0.58
RAP1B-227ENST00000542018 C1orf137Q5JT78 98 aa11.41□□□□□ -0.58
RAP1B-227ENST00000542018 PHF5AQ7RTV0 110 aaKnown RBP11.41□□□□□ -0.58
RAP1B-227ENST00000542018 ZC2HC1BQ5TFG8 222 aa11.4□□□□□ -0.58
RAP1B-227ENST00000542018 CD164L2Q6UWJ8 174 aa11.4□□□□□ -0.58
RAP1B-227ENST00000542018 KRTAP11-1Q8IUC1 163 aa11.4□□□□□ -0.58
RAP1B-227ENST00000542018 TRAV12-1A0A0B4J245 112 aa11.39□□□□□ -0.59
RAP1B-227ENST00000542018 FABP4P15090 132 aa11.39□□□□□ -0.59
RAP1B-227ENST00000542018 SEC11AP67812 179 aa11.39□□□□□ -0.59
RAP1B-227ENST00000542018 C5orf52A6NGY3 159 aa11.38□□□□□ -0.59
RAP1B-227ENST00000542018 LINC00242Q5T6M2 205 aa11.38□□□□□ -0.59
RAP1B-227ENST00000542018 LCE2AQ5TA79 106 aaPredicted RBP11.38□□□□□ -0.59
RAP1B-227ENST00000542018 HIST3H2BBQ8N257 126 aa11.38□□□□□ -0.59
RAP1B-227ENST00000542018 IGLV7-43P04211 117 aa11.37□□□□□ -0.59
RAP1B-227ENST00000542018 KRTAP1-4P0C5Y4 121 aa11.37□□□□□ -0.59
RAP1B-227ENST00000542018 IGHV3OR16-9A0A0B4J2B5 98 aa11.36□□□□□ -0.59
RAP1B-227ENST00000542018 APOMO95445 188 aa11.36□□□□□ -0.59
RAP1B-227ENST00000542018 SNRPEP62304 92 aaKnown RBP11.36□□□□□ -0.59
RAP1B-227ENST00000542018 MAP1LC3CQ9BXW4 147 aa11.36□□□□□ -0.59
RAP1B-227ENST00000542018 TINCRA0A1B0GVN0 87 aa11.35□□□□□ -0.59
RAP1B-227ENST00000542018 HERVK_113P63121 156 aa11.35□□□□□ -0.59
RAP1B-227ENST00000542018 DIRC1Q969H9 104 aa11.35□□□□□ -0.59
RAP1B-227ENST00000542018 H0Y9J4 135 aa11.34□□□□□ -0.59
RAP1B-227ENST00000542018 IGLC3P0DOY3 106 aa11.34□□□□□ -0.59
RAP1B-227ENST00000542018 S100A2P29034 98 aa11.34□□□□□ -0.59
RAP1B-227ENST00000542018 KRTAP9-6A0A140TA67 174 aa11.33□□□□□ -0.6
RAP1B-227ENST00000542018 COX7A2LO14548 114 aa11.33□□□□□ -0.6
RAP1B-227ENST00000542018 LINC01561Q8N1V8 128 aa11.33□□□□□ -0.6
RAP1B-227ENST00000542018 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
RAP1B-227ENST00000542018 HIST1H2BLQ99880 126 aa11.33□□□□□ -0.6
RAP1B-227ENST00000542018 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
RAP1B-227ENST00000542018 CHTOPQ9Y3Y2 248 aaKnown RBP11.33□□□□□ -0.6
RAP1B-227ENST00000542018 IGLV5-45A0A087WSX0 123 aa11.32□□□□□ -0.6
RAP1B-227ENST00000542018 SYS1-DBNDD2H3BUS1 97 aa11.32□□□□□ -0.6
RAP1B-227ENST00000542018 RPL18AQ02543 176 aaKnown RBP11.32□□□□□ -0.6
RAP1B-227ENST00000542018 PRR4Q16378 134 aa11.32□□□□□ -0.6
RAP1B-227ENST00000542018 A0A087WZ39 114 aa11.31□□□□□ -0.6
RAP1B-227ENST00000542018 F8VRH5 84 aa11.31□□□□□ -0.6
RAP1B-227ENST00000542018 C2orf48Q96LS8 159 aa11.31□□□□□ -0.6
RAP1B-227ENST00000542018 IGLV1-50A0A075B6I6 118 aa11.3□□□□□ -0.6
RAP1B-227ENST00000542018 FAM168BA1KXE4 195 aa11.3□□□□□ -0.6
RAP1B-227ENST00000542018 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
RAP1B-227ENST00000542018 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
RAP1B-227ENST00000542018 MALP21145 153 aa11.29□□□□□ -0.6
RAP1B-227ENST00000542018 C5orf38Q86SI9 138 aa11.29□□□□□ -0.6
RAP1B-227ENST00000542018 KRTAP7-1Q8IUC3 87 aa11.29□□□□□ -0.6
RAP1B-227ENST00000542018 MRPL35Q9NZE8 188 aaKnown RBP11.29□□□□□ -0.6
RAP1B-227ENST00000542018 A0A0U1RQV1 116 aa11.28□□□□□ -0.6
RAP1B-227ENST00000542018 CDKN2A-AS1Q9UH64 79 aa11.28□□□□□ -0.6
RAP1B-227ENST00000542018 TMA7Q9Y2S6 64 aaKnown RBP11.28□□□□□ -0.6
RAP1B-227ENST00000542018 C11orf86A6NJI1 115 aa11.27□□□□□ -0.61
RAP1B-227ENST00000542018 H0Y8G0 127 aa11.27□□□□□ -0.61
RAP1B-227ENST00000542018 LINC01545Q5VT33 79 aa11.27□□□□□ -0.61
RAP1B-227ENST00000542018 LINC00469Q8N7U9 141 aa11.27□□□□□ -0.61
RAP1B-227ENST00000542018 H3BRM9 83 aa11.26□□□□□ -0.61
RAP1B-227ENST00000542018 ZNF22P17026 224 aaPredicted RBP11.26□□□□□ -0.61
RAP1B-227ENST00000542018 PLNP26678 52 aa11.26□□□□□ -0.61
RAP1B-227ENST00000542018 KRTDAPP60985 99 aa11.26□□□□□ -0.61
RAP1B-227ENST00000542018 RNF151Q2KHN1 245 aa11.26□□□□□ -0.61
RAP1B-227ENST00000542018 DPM2O94777 84 aa11.25□□□□□ -0.61
RAP1B-227ENST00000542018 OR10D4PQ8NGN7 298 aa11.25□□□□□ -0.61
RAP1B-227ENST00000542018 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
RAP1B-227ENST00000542018 IGKCP01834 107 aa11.23□□□□□ -0.61
RAP1B-227ENST00000542018 AKR1D1P51857 326 aa11.23□□□□□ -0.61
RAP1B-227ENST00000542018 C10orf25Q5T742 122 aa11.23□□□□□ -0.61
RAP1B-227ENST00000542018 C20orf202A1L168 122 aa11.22□□□□□ -0.61
RAP1B-227ENST00000542018 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
RAP1B-227ENST00000542018 TMEM170BQ5T4T1 132 aa11.22□□□□□ -0.61
RAP1B-227ENST00000542018 F8WDY8 70 aa11.21□□□□□ -0.61
RAP1B-227ENST00000542018 FAM19A5Q7Z5A7 132 aaPredicted RBP11.21□□□□□ -0.61
RAP1B-227ENST00000542018 ORAOV1Q8WV07 137 aa11.21□□□□□ -0.61
RAP1B-227ENST00000542018 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
RAP1B-227ENST00000542018 TMEM223A0PJW6 202 aa11.2□□□□□ -0.62
RAP1B-227ENST00000542018 PMCHL2Q9BQD1 86 aa11.2□□□□□ -0.62
RAP1B-227ENST00000542018 MUC17Q685J3 4493 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms