RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 LGALS9BQ3B8N2 356 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 C12orf73Q69YU5 71 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 BRD3OSQ6XYD6 125 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 Q6ZS49 121 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 C2orf91Q6ZV80 131 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 CLECL1Q8IZS7 167 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 BRK1Q8WUW1 75 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 C2orf50Q96LR7 162 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 LINC01600Q96MT4 127 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 MGST2Q99735 147 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 FAM103A1Q9BTL3 118 aaKnown RBP2.3□□□□□ -2.04
SNHG1-217ENST00000541578 HLA-DRB4X5D2U9 266 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 MUC4Q99102 2169 aa2.3□□□□□ -2.04
SNHG1-217ENST00000541578 TRAV2A0A0B4J234 112 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 IGHV1-58A0A0C4DH39 117 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 H3BPC8 53 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 H3BT86 120 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 IGKCP01834 107 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 CTSGP08311 255 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 CSN1S1P47710 185 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 PCBD1P61457 104 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 C1orf140Q5VVS0 124 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 LINC00305Q7Z4B0 112 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 GPHB5Q86YW7 130 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 OR5AS1Q8N127 324 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 SMIM7Q9BQ49 75 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 UPK3BQ9BT76 320 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 ARL2-SNX15V9GYD0 113 aa2.29□□□□□ -2.04
SNHG1-217ENST00000541578 TRBV20OR9-2A0A075B6H5 130 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 IGHV1-24A0A0C4DH33 117 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 MDFIC2A0A1B0GVS7 189 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 C19orf71A6NCJ1 209 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 C2orf70A6NJV1 201 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 M0R129 80 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 HMGN4O00479 90 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 NPYP01303 97 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 ACYP1P07311 99 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 ATP5EP56381 51 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-217ENST00000541578 TSKUQ8WUA8 353 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 ZC2HC1AQ96GY0 325 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 CSMD3Q7Z407 3707 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 DNAH3Q8TD57 4116 aa2.28□□□□□ -2.04
SNHG1-217ENST00000541578 TCRBV4S1A1TA0A5B7 111 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 A6NIN4 97 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 C17orf98A8MV24 154 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 LST1O00453 97 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 NDUFB3O43676 98 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 TCL1BO95988 128 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 TCRAP04437 139 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 ASAH2BP0C7U1 165 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 UBE2L3P68036 154 aaKnown RBP2.27□□□□□ -2.05
SNHG1-217ENST00000541578 FAM229BQ4G0N7 80 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 LGALS9CQ6DKI2 356 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 KTN1-AS1Q86SY8 53 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 LINC00304Q8N9R0 145 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 H1FXQ92522 213 aaKnown RBP2.27□□□□□ -2.05
SNHG1-217ENST00000541578 CHCHD1Q96BP2 118 aaKnown RBP2.27□□□□□ -2.05
SNHG1-217ENST00000541578 DSCR8Q96T75 97 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 DPH3P1Q9H4G8 78 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 CKLFQ9UBR5 152 aa2.27□□□□□ -2.05
SNHG1-217ENST00000541578 KLK5Q9Y337 293 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-217ENST00000541578 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 UBE2L5PA0A1B0GUS4 154 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 hADV29S1A0JD25 119 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 A8MUN3 132 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 F2Z2F3 143 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 H3BUX3 64 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 M0R1W7 72 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 LGALS3P17931 250 aaKnown RBP2.26□□□□□ -2.05
SNHG1-217ENST00000541578 XCL1P47992 114 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 HIST1H4AP62805 103 aaKnown RBP2.26□□□□□ -2.05
SNHG1-217ENST00000541578 CCL20P78556 96 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 TMEM170BQ5T4T1 132 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 C6orf201Q7Z4U5 140 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 VMO1Q7Z5L0 202 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 Q8N2B8 174 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 SERP2Q8N6R1 65 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 ODF3Q96PU9 254 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 TRGV9Q99603 122 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 TXNDC17Q9BRA2 123 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 XAGE1AQ9HD64 81 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 IL36BQ9NZH7 164 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 KAAG1Q9UBP8 84 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 HHLA3Q9XRX5 114 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 HILPDAQ9Y5L2 63 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 LY96Q9Y6Y9 160 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 MINOS1-NBL1R4GNA1 71 aa2.26□□□□□ -2.05
SNHG1-217ENST00000541578 A0A0J9YX75 114 aa2.25□□□□□ -2.05
SNHG1-217ENST00000541578 A0A1W2PNN7 141 aa2.25□□□□□ -2.05
SNHG1-217ENST00000541578 IGKV4-1P06312 121 aa2.25□□□□□ -2.05
SNHG1-217ENST00000541578 FAM27BQ5VT28 67 aa2.25□□□□□ -2.05
SNHG1-217ENST00000541578 LINC00643Q86TS7 51 aa2.25□□□□□ -2.05
SNHG1-217ENST00000541578 RPP25LQ8N5L8 163 aaKnown RBP2.25□□□□□ -2.05
SNHG1-217ENST00000541578 TTTY13Q9BZ97 58 aa2.25□□□□□ -2.05
SNHG1-217ENST00000541578 NXT2Q9NPJ8 142 aaKnown RBP2.25□□□□□ -2.05
SNHG1-217ENST00000541578 GNG13Q9P2W3 67 aa2.25□□□□□ -2.05
SNHG1-217ENST00000541578 TIMM9Q9Y5J7 89 aa2.25□□□□□ -2.05
SNHG1-217ENST00000541578 SACSQ9NZJ4 4579 aa2.25□□□□□ -2.05
SNHG1-217ENST00000541578 TRBV27A0A0K0K1C4 114 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 CPSF4LA6NMK7 179 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms