RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 NIPSNAP1Q9BPW8 284 aa0.69□□□□□ -2.3
RAP1B-224ENST00000541216 CMSS1Q9BQ75 279 aaKnown RBP0.69□□□□□ -2.3
RAP1B-224ENST00000541216 IRGMA1A4Y4 181 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 CD2P06729 351 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 SLC25A4P12235 298 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 COX4I1P13073 169 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 PKIAP61925 76 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 RPS29P62273 56 aaKnown RBP0.68□□□□□ -2.3
RAP1B-224ENST00000541216 PRLHP81277 87 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 MLLT11Q13015 90 aaPredicted RBP0.68□□□□□ -2.3
RAP1B-224ENST00000541216 CATR1Q13166 79 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 Q86TA4 180 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 NUP35Q8NFH5 326 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 TSC22D3Q99576 134 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 FKBP11Q9NYL4 201 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 COMMD3Q9UBI1 195 aa0.68□□□□□ -2.3
RAP1B-224ENST00000541216 UTP11Q9Y3A2 253 aaKnown RBP0.68□□□□□ -2.3
RAP1B-224ENST00000541216 IGHV1-58A0A0C4DH39 117 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 SNRPGP15A8MWD9 76 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 J3QLW9 94 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 FXYD1O00168 92 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 HMGN1P05114 100 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 SRP19P09132 144 aaKnown RBP0.67□□□□□ -2.3
RAP1B-224ENST00000541216 UBBP0CG47 229 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 RPL7P18124 248 aaKnown RBP0.67□□□□□ -2.3
RAP1B-224ENST00000541216 RPL12P30050 165 aaKnown RBP0.67□□□□□ -2.3
RAP1B-224ENST00000541216 HSPE1P61604 102 aaKnown RBP0.67□□□□□ -2.3
RAP1B-224ENST00000541216 LPCAT3Q6P1A2 487 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 SLC51BQ86UW2 128 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 OR8J3Q8NGG0 315 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 OR5AK2Q8NH90 309 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 TMEM147Q9BVK8 224 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 ENY2Q9NPA8 101 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 FKBP14Q9NWM8 211 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 OR5AC2Q9NZP5 309 aa0.67□□□□□ -2.3
RAP1B-224ENST00000541216 M0R3E3 92 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 SSNA1O43805 119 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 PMP2P02689 132 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 FABP1P07148 127 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 ZNF80P51504 273 aaPredicted RBP0.66□□□□□ -2.3
RAP1B-224ENST00000541216 FXYD4P59646 89 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 DEFA3P59666 94 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 FABP9Q0Z7S8 132 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 NDUFA5Q16718 116 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 FAM74A4Q5TZK3 123 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 LCN15Q6UWW0 184 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 GID4Q8IVV7 300 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 OR5A1Q8NGJ0 315 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 AQP10Q96PS8 301 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 PDCD10Q9BUL8 212 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 AGPAT4-IT1Q9H0P7 198 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 LPAR5Q9H1C0 372 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 CKLFQ9UBR5 152 aa0.66□□□□□ -2.3
RAP1B-224ENST00000541216 TRBV25-1A0A075B6N4 114 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 TRBV10-1A0A0K0K1A3 114 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 M0R036 132 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 SHBGP04278 402 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 TCRAP04437 139 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 METTL15P1P0C7V9 234 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 NKX2-5P52952 324 aaPredicted RBP0.65□□□□□ -2.31
RAP1B-224ENST00000541216 S100A10P60903 97 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 HSD17B12Q53GQ0 312 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 TMEM78Q5T7P6 136 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 C1orf195Q5TG92 126 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 ZNF818PQ6ZRF7 136 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 PLEKHB2Q96CS7 222 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 DIRAS2Q96HU8 199 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 SPRR4Q96PI1 79 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 DERL1Q9BUN8 251 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 NAA60Q9H7X0 242 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 IL36BQ9NZH7 164 aa0.65□□□□□ -2.31
RAP1B-224ENST00000541216 TRBV7-3A0A075B6L6 115 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 LOC107984156A0A0G2JMH3 177 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 FAM236AA0A1B0GUQ0 79 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 FAM236BA0A1B0GV22 79 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 GABARAPH6UMI1 98 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 CCL25O15444 150 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 OR5G3P0C626 314 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 GTF2A1P52655 376 aaPredicted RBP0.64□□□□□ -2.31
RAP1B-224ENST00000541216 ARPC4P59998 168 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 MT1XP80297 61 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 SPAG11BQ08648 103 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 ARL17AQ8IVW1 177 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 MNS1Q8NEH6 495 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 PAIP2Q9BPZ3 127 aaKnown RBP0.64□□□□□ -2.31
RAP1B-224ENST00000541216 SPRR2GQ9BYE4 73 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 CMTM6Q9NX76 183 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 HIGD1AQ9Y241 93 aa0.64□□□□□ -2.31
RAP1B-224ENST00000541216 IGHV1-24A0A0C4DH33 117 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 TRBV6-1A0A0K0K1D8 114 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 A8MWV9 139 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 F6UZH7 168 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 INMT-MINDY4F8WBC2 141 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 H0YAA0 97 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 H3BQ15 152 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 PPYP01298 95 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 NMBP08949 121 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 MSMO1Q15800 293 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms