RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TRBV27A0A0K0K1C4 114 aa2.57□□□□□ -2
SNHG1-214ENST00000540865 LCE1FQ5T754 118 aa2.57□□□□□ -2
SNHG1-214ENST00000540865 PACRGQ96M98 296 aaPredicted RBP2.57□□□□□ -2
SNHG1-214ENST00000540865 ST20Q9HBF5 79 aa2.57□□□□□ -2
SNHG1-214ENST00000540865 TP73-AS1Q9UF72 201 aa2.57□□□□□ -2
SNHG1-214ENST00000540865 UBE2D4Q9Y2X8 147 aa2.57□□□□□ -2
SNHG1-214ENST00000540865 RAB19A4D1S5 217 aa2.56□□□□□ -2
SNHG1-214ENST00000540865 UPK1BO75841 260 aa2.56□□□□□ -2
SNHG1-214ENST00000540865 POLR2KP53803 58 aaKnown RBP2.56□□□□□ -2
SNHG1-214ENST00000540865 DEFA1P59665 94 aa2.56□□□□□ -2
SNHG1-214ENST00000540865 KIAA0087Q14695 138 aa2.56□□□□□ -2
SNHG1-214ENST00000540865 RNASE13Q5GAN3 156 aaKnown RBP2.56□□□□□ -2
SNHG1-214ENST00000540865 MRPL55Q7Z7F7 128 aaKnown RBP2.56□□□□□ -2
SNHG1-214ENST00000540865 KRTAP13-1Q8IUC0 172 aa2.56□□□□□ -2
SNHG1-214ENST00000540865 SMIM12Q96EX1 92 aa2.56□□□□□ -2
SNHG1-214ENST00000540865 MARVELD1Q9BSK0 173 aa2.56□□□□□ -2
SNHG1-214ENST00000540865 ALKBH7Q9BT30 221 aaPredicted RBP2.56□□□□□ -2
SNHG1-214ENST00000540865 TIMM21Q9BVV7 248 aa2.56□□□□□ -2
SNHG1-214ENST00000540865 RNASE7Q9H1E1 156 aaKnown RBP2.56□□□□□ -2
SNHG1-214ENST00000540865 ZNF727A8MUV8 499 aa2.55□□□□□ -2
SNHG1-214ENST00000540865 M0R2T5 61 aa2.55□□□□□ -2
SNHG1-214ENST00000540865 FCER1GP30273 86 aa2.55□□□□□ -2
SNHG1-214ENST00000540865 UBE2AP49459 152 aa2.55□□□□□ -2
SNHG1-214ENST00000540865 FOXA3P55318 350 aaPredicted RBP2.55□□□□□ -2
SNHG1-214ENST00000540865 CENPWQ5EE01 88 aa2.55□□□□□ -2
SNHG1-214ENST00000540865 Q6ZUT4 128 aa2.55□□□□□ -2
SNHG1-214ENST00000540865 MBD3L1Q8WWY6 194 aa2.55□□□□□ -2
SNHG1-214ENST00000540865 C11orf52Q96A22 123 aa2.55□□□□□ -2
SNHG1-214ENST00000540865 BIN3Q9NQY0 253 aa2.55□□□□□ -2
SNHG1-214ENST00000540865 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
SNHG1-214ENST00000540865 KRTAP16-1A8MUX0 517 aa2.54□□□□□ -2
SNHG1-214ENST00000540865 GNG4P50150 75 aa2.54□□□□□ -2
SNHG1-214ENST00000540865 CCL20P78556 96 aa2.54□□□□□ -2
SNHG1-214ENST00000540865 C2orf82Q6UX34 121 aa2.54□□□□□ -2
SNHG1-214ENST00000540865 KCNRGQ8N5I3 272 aa2.54□□□□□ -2
SNHG1-214ENST00000540865 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
SNHG1-214ENST00000540865 DAND5Q8N907 189 aa2.54□□□□□ -2
SNHG1-214ENST00000540865 SFT2D1Q8WV19 159 aa2.54□□□□□ -2
SNHG1-214ENST00000540865 FAM218AQ96MZ4 157 aa2.54□□□□□ -2
SNHG1-214ENST00000540865 KIR2DL4Q99706 377 aa2.54□□□□□ -2
SNHG1-214ENST00000540865 TGIF2-C20orf24A0A0A6YYL0 155 aa2.53□□□□□ -2
SNHG1-214ENST00000540865 NDUFAF8A1L188 74 aa2.53□□□□□ -2
SNHG1-214ENST00000540865 RPL37AP8A6NKH3 93 aa2.53□□□□□ -2
SNHG1-214ENST00000540865 LINC00299Q6ZSB3 139 aa2.53□□□□□ -2
SNHG1-214ENST00000540865 LINC01561Q8N1V8 128 aa2.53□□□□□ -2
SNHG1-214ENST00000540865 LINC00469Q8N7U9 141 aa2.53□□□□□ -2
SNHG1-214ENST00000540865 LINC00167Q96N53 147 aa2.53□□□□□ -2
SNHG1-214ENST00000540865 XAGE1AQ9HD64 81 aa2.53□□□□□ -2
SNHG1-214ENST00000540865 NDUFA12Q9UI09 145 aa2.53□□□□□ -2
SNHG1-214ENST00000540865 TRBV20OR9-2A0A075B6H5 130 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 IGLV8-61A0A075B6I0 122 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 A0A1B0GV50 99 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 UMAD1C9J7I0 102 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 PPP1R17O96001 155 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 SPINK1P00995 79 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 HBBP68871 147 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 MRPS36P82909 103 aaKnown RBP2.52□□□□□ -2.01
SNHG1-214ENST00000540865 Q5BKY6 102 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 FAM213BQ8TBF2 198 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 FAM104AQ969W3 186 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 PLEKHB2Q96CS7 222 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 MANBALQ9NQG1 85 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 SPANXA1Q9NS26 97 aa2.52□□□□□ -2.01
SNHG1-214ENST00000540865 FXYD6-FXYD2A0A087WZ82 144 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 PPP1R2P9O14990 202 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 TCAPO15273 167 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 PDE6DO43924 150 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 RAB4AP20338 218 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 CKS1BP61024 79 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 RPL32P62910 135 aaKnown RBP2.51□□□□□ -2.01
SNHG1-214ENST00000540865 FAM19A2Q8N3H0 131 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 S100ZQ8WXG8 99 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 GNB1LQ9BYB4 327 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 TMEM191AQ9H0A3 160 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 GNG13Q9P2W3 67 aa2.51□□□□□ -2.01
SNHG1-214ENST00000540865 A8MWL6 223 aa2.5□□□□□ -2.01
SNHG1-214ENST00000540865 GIPP09681 153 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-214ENST00000540865 RPS29P62273 56 aaKnown RBP2.5□□□□□ -2.01
SNHG1-214ENST00000540865 RPL39P62891 51 aaKnown RBP2.5□□□□□ -2.01
SNHG1-214ENST00000540865 IFITM3Q01628 133 aa2.5□□□□□ -2.01
SNHG1-214ENST00000540865 PCOTHQ58A44 107 aa2.5□□□□□ -2.01
SNHG1-214ENST00000540865 C6orf226Q5I0X4 101 aa2.5□□□□□ -2.01
SNHG1-214ENST00000540865 Q8IZM0 81 aa2.5□□□□□ -2.01
SNHG1-214ENST00000540865 Q8NBF4 154 aa2.5□□□□□ -2.01
SNHG1-214ENST00000540865 BORCS7Q96B45 105 aa2.5□□□□□ -2.01
SNHG1-214ENST00000540865 MED9Q9NWA0 146 aa2.5□□□□□ -2.01
SNHG1-214ENST00000540865 IGKV2-28A0A075B6P5 120 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 A0A1B0GUT8 65 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 F8VRH5 84 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 SMKR1H3BMG3 65 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 K7EN84 100 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 GATCO43716 136 aaKnown RBP2.49□□□□□ -2.01
SNHG1-214ENST00000540865 SLC25A20O43772 301 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 IGKV2D-28P01615 120 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 PRLHP81277 87 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 COX6B2Q6YFQ2 88 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 Q6ZN92 141 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 FAM19A1Q7Z5A9 133 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms