RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 SCXQ7RTU7 201 aa12.42□□□□□ -0.42
DDX55-207ENST00000540763 Q8N1X5 172 aa12.42□□□□□ -0.42
DDX55-207ENST00000540763 TOMM7Q9P0U1 55 aa12.42□□□□□ -0.42
DDX55-207ENST00000540763 LINC00474Q9P2X8 69 aa12.42□□□□□ -0.42
DDX55-207ENST00000540763 IGLV5-39A0A0G2JS06 123 aa12.41□□□□□ -0.42
DDX55-207ENST00000540763 ODF1Q14990 250 aa12.41□□□□□ -0.42
DDX55-207ENST00000540763 UNQ6190/PRO20217Q6UXQ8 127 aa12.41□□□□□ -0.42
DDX55-207ENST00000540763 SPACA4Q8TDM5 124 aa12.41□□□□□ -0.42
DDX55-207ENST00000540763 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.41□□□□□ -0.42
DDX55-207ENST00000540763 SPINK8P0C7L1 97 aa12.4□□□□□ -0.42
DDX55-207ENST00000540763 TLX1NBP0CAT3 122 aa12.4□□□□□ -0.42
DDX55-207ENST00000540763 CKS1BP61024 79 aa12.4□□□□□ -0.42
DDX55-207ENST00000540763 TMEM170BQ5T4T1 132 aa12.4□□□□□ -0.42
DDX55-207ENST00000540763 C10orf25Q5T742 122 aa12.4□□□□□ -0.42
DDX55-207ENST00000540763 COX7B2Q8TF08 81 aa12.4□□□□□ -0.42
DDX55-207ENST00000540763 MAP1LC3CQ9BXW4 147 aa12.4□□□□□ -0.42
DDX55-207ENST00000540763 C6orf48Q9UBA6 75 aa12.4□□□□□ -0.42
DDX55-207ENST00000540763 CIRBP-AS1Q8TBR5 109 aa12.39□□□□□ -0.43
DDX55-207ENST00000540763 A0A096LNI7 61 aa12.38□□□□□ -0.43
DDX55-207ENST00000540763 PANO1I0J062 215 aa12.38□□□□□ -0.43
DDX55-207ENST00000540763 C2orf82Q6UX34 121 aa12.38□□□□□ -0.43
DDX55-207ENST00000540763 H0Y8G0 127 aa12.37□□□□□ -0.43
DDX55-207ENST00000540763 CHTF8P0CG12 524 aa12.37□□□□□ -0.43
DDX55-207ENST00000540763 PLNP26678 52 aa12.37□□□□□ -0.43
DDX55-207ENST00000540763 PTTG1IPP53801 180 aa12.37□□□□□ -0.43
DDX55-207ENST00000540763 HAMPP81172 84 aa12.37□□□□□ -0.43
DDX55-207ENST00000540763 IGKV2-24A0A0C4DH68 120 aa12.35□□□□□ -0.43
DDX55-207ENST00000540763 TMEM223A0PJW6 202 aa12.35□□□□□ -0.43
DDX55-207ENST00000540763 SFTA2Q6UW10 78 aa12.35□□□□□ -0.43
DDX55-207ENST00000540763 PLAC8Q9NZF1 115 aa12.35□□□□□ -0.43
DDX55-207ENST00000540763 RPL18AQ02543 176 aaKnown RBP12.34□□□□□ -0.43
DDX55-207ENST00000540763 A0A087WYN8 130 aa12.33□□□□□ -0.44
DDX55-207ENST00000540763 SYS1-DBNDD2H3BUS1 97 aa12.33□□□□□ -0.44
DDX55-207ENST00000540763 DPM2O94777 84 aa12.33□□□□□ -0.44
DDX55-207ENST00000540763 MAJINQ3KP22 176 aa12.33□□□□□ -0.44
DDX55-207ENST00000540763 NDUFC2-KCTD14E9PQ53 114 aa12.32□□□□□ -0.44
DDX55-207ENST00000540763 GAGE2BQ13066 116 aa12.32□□□□□ -0.44
DDX55-207ENST00000540763 PET117Q6UWS5 81 aa12.31□□□□□ -0.44
DDX55-207ENST00000540763 Q6ZRP5 223 aa12.31□□□□□ -0.44
DDX55-207ENST00000540763 DPH3Q96FX2 82 aa12.31□□□□□ -0.44
DDX55-207ENST00000540763 IGKCP01834 107 aa12.3□□□□□ -0.44
DDX55-207ENST00000540763 STPG4Q8N801 248 aa12.3□□□□□ -0.44
DDX55-207ENST00000540763 EPM2AB3EWF7 344 aa12.29□□□□□ -0.44
DDX55-207ENST00000540763 S100A6P06703 90 aa12.29□□□□□ -0.44
DDX55-207ENST00000540763 LINC01545Q5VT33 79 aa12.29□□□□□ -0.44
DDX55-207ENST00000540763 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
DDX55-207ENST00000540763 SMR3BP02814 79 aaPredicted RBP12.28□□□□□ -0.44
DDX55-207ENST00000540763 C9orf116Q5BN46 136 aaPredicted RBP12.28□□□□□ -0.44
DDX55-207ENST00000540763 LINC00528Q8N1L1 170 aa12.28□□□□□ -0.44
DDX55-207ENST00000540763 C3orf79P0CE67 100 aa12.27□□□□□ -0.45
DDX55-207ENST00000540763 HERVK_113P61574 105 aa12.27□□□□□ -0.45
DDX55-207ENST00000540763 PMCHL2Q9BQD1 86 aa12.27□□□□□ -0.45
DDX55-207ENST00000540763 Q5VSD8 79 aa12.26□□□□□ -0.45
DDX55-207ENST00000540763 HIST3H2BBQ8N257 126 aa12.26□□□□□ -0.45
DDX55-207ENST00000540763 ZNF625Q96I27 306 aaPredicted RBP12.26□□□□□ -0.45
DDX55-207ENST00000540763 S100A2P29034 98 aa12.24□□□□□ -0.45
DDX55-207ENST00000540763 KRTDAPP60985 99 aa12.24□□□□□ -0.45
DDX55-207ENST00000540763 COX17Q14061 63 aa12.24□□□□□ -0.45
DDX55-207ENST00000540763 GAGE2EQ4V326 116 aa12.24□□□□□ -0.45
DDX55-207ENST00000540763 GAGE2DQ9UEU5 116 aa12.24□□□□□ -0.45
DDX55-207ENST00000540763 LEPROTO15243 131 aa12.23□□□□□ -0.45
DDX55-207ENST00000540763 PLA2G1BP04054 148 aaKnown RBP12.23□□□□□ -0.45
DDX55-207ENST00000540763 AKR1D1P51857 326 aa12.23□□□□□ -0.45
DDX55-207ENST00000540763 PLEKHB2Q96CS7 222 aa12.23□□□□□ -0.45
DDX55-207ENST00000540763 DMBT1Q9UGM3 2413 aaPredicted RBP12.23□□□□□ -0.45
DDX55-207ENST00000540763 C20orf202A1L168 122 aa12.22□□□□□ -0.45
DDX55-207ENST00000540763 HIST1H2BLQ99880 126 aa12.22□□□□□ -0.45
DDX55-207ENST00000540763 HERV-K104P63124 156 aa12.21□□□□□ -0.45
DDX55-207ENST00000540763 C7orf33Q8WU49 177 aa12.21□□□□□ -0.45
DDX55-207ENST00000540763 ERG28Q9UKR5 140 aa12.21□□□□□ -0.45
DDX55-207ENST00000540763 A0A1W2PNN7 141 aa12.2□□□□□ -0.46
DDX55-207ENST00000540763 C9orf129Q5T035 196 aaKnown RBP12.2□□□□□ -0.46
DDX55-207ENST00000540763 E9PLD3 99 aa12.19□□□□□ -0.46
DDX55-207ENST00000540763 NMUP48645 174 aa12.19□□□□□ -0.46
DDX55-207ENST00000540763 NDUFA12Q9UI09 145 aa12.19□□□□□ -0.46
DDX55-207ENST00000540763 MYMXA0A1B0GTQ4 84 aa12.18□□□□□ -0.46
DDX55-207ENST00000540763 C5orf52A6NGY3 159 aa12.18□□□□□ -0.46
DDX55-207ENST00000540763 J3QQQ9 107 aa12.18□□□□□ -0.46
DDX55-207ENST00000540763 LINC00587B1AMM8 73 aa12.17□□□□□ -0.46
DDX55-207ENST00000540763 INAFM2P0DMQ5 153 aa12.17□□□□□ -0.46
DDX55-207ENST00000540763 TSPEAR-AS2P59090 65 aa12.17□□□□□ -0.46
DDX55-207ENST00000540763 RPL37AP61513 92 aaKnown RBP12.17□□□□□ -0.46
DDX55-207ENST00000540763 SNRPEP62304 92 aaKnown RBP12.17□□□□□ -0.46
DDX55-207ENST00000540763 VPS13BQ7Z7G8 4022 aa12.16□□□□□ -0.46
DDX55-207ENST00000540763 PFN2P35080 140 aa12.16□□□□□ -0.46
DDX55-207ENST00000540763 XAGE1AQ9HD64 81 aa12.16□□□□□ -0.46
DDX55-207ENST00000540763 FAM168BA1KXE4 195 aa12.15□□□□□ -0.46
DDX55-207ENST00000540763 LGALS3P17931 250 aaKnown RBP12.15□□□□□ -0.46
DDX55-207ENST00000540763 KRTAP10-4P60372 401 aaPredicted RBP12.15□□□□□ -0.46
DDX55-207ENST00000540763 PLA2G2DQ9UNK4 145 aa12.15□□□□□ -0.46
DDX55-207ENST00000540763 FAT1Q14517 4588 aa12.15□□□□□ -0.46
DDX55-207ENST00000540763 FAM19A5Q7Z5A7 132 aaPredicted RBP12.14□□□□□ -0.47
DDX55-207ENST00000540763 KRTAP7-1Q8IUC3 87 aa12.13□□□□□ -0.47
DDX55-207ENST00000540763 M0QXV9 152 aa12.12□□□□□ -0.47
DDX55-207ENST00000540763 MEIG1Q5JSS6 88 aa12.12□□□□□ -0.47
DDX55-207ENST00000540763 TP73-AS1Q9UF72 201 aa12.12□□□□□ -0.47
DDX55-207ENST00000540763 SND1-IT1Q9HBX3 110 aa12.11□□□□□ -0.47
DDX55-207ENST00000540763 FLG2Q5D862 2391 aaPredicted RBP12.1□□□□□ -0.47
DDX55-207ENST00000540763 LINC00158P58513 81 aa12.1□□□□□ -0.47
DDX55-207ENST00000540763 SERTAD4-AS1Q5TG53 156 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms