RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 PLEKHB2Q96CS7 222 aa4.43□□□□□ -1.7
LRP6-204ENST00000540415 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
LRP6-204ENST00000540415 PPP1R17O96001 155 aa4.42□□□□□ -1.7
LRP6-204ENST00000540415 C6orf226Q5I0X4 101 aa4.42□□□□□ -1.7
LRP6-204ENST00000540415 XP32Q5T750 250 aa4.42□□□□□ -1.7
LRP6-204ENST00000540415 FAM104BQ5XKR9 115 aa4.42□□□□□ -1.7
LRP6-204ENST00000540415 FAM19A1Q7Z5A9 133 aa4.42□□□□□ -1.7
LRP6-204ENST00000540415 C20orf78Q9BR46 151 aa4.42□□□□□ -1.7
LRP6-204ENST00000540415 ALKBH7Q9BT30 221 aaPredicted RBP4.42□□□□□ -1.7
LRP6-204ENST00000540415 SMIM2Q9BVW6 85 aa4.42□□□□□ -1.7
LRP6-204ENST00000540415 BATF3Q9NR55 127 aa4.42□□□□□ -1.7
LRP6-204ENST00000540415 TRBV24-1A0A075B6N3 115 aa4.41□□□□□ -1.7
LRP6-204ENST00000540415 NPYP01303 97 aa4.41□□□□□ -1.7
LRP6-204ENST00000540415 CEBPGP53567 150 aa4.41□□□□□ -1.7
LRP6-204ENST00000540415 RIGQ13278 110 aa4.41□□□□□ -1.7
LRP6-204ENST00000540415 SPAG11AQ6PDA7 123 aa4.41□□□□□ -1.7
LRP6-204ENST00000540415 Q6ZN92 141 aa4.41□□□□□ -1.7
LRP6-204ENST00000540415 Q8IZM0 81 aa4.41□□□□□ -1.7
LRP6-204ENST00000540415 LINC01561Q8N1V8 128 aa4.41□□□□□ -1.7
LRP6-204ENST00000540415 Q8NBF4 154 aa4.41□□□□□ -1.7
LRP6-204ENST00000540415 IGLV5-37A0A075B6J1 123 aa4.4□□□□□ -1.71
LRP6-204ENST00000540415 HMSDA8MTL9 139 aa4.4□□□□□ -1.71
LRP6-204ENST00000540415 D6R8Y8 96 aa4.4□□□□□ -1.71
LRP6-204ENST00000540415 F8VRH5 84 aa4.4□□□□□ -1.71
LRP6-204ENST00000540415 TEX46H3BTG2 121 aa4.4□□□□□ -1.71
LRP6-204ENST00000540415 CKS2P33552 79 aa4.4□□□□□ -1.71
LRP6-204ENST00000540415 IFI27P40305 119 aaPredicted RBP4.4□□□□□ -1.71
LRP6-204ENST00000540415 TMEM141Q96I45 108 aa4.4□□□□□ -1.71
LRP6-204ENST00000540415 EIF5A2Q9GZV4 153 aaKnown RBP4.4□□□□□ -1.71
LRP6-204ENST00000540415 TMEM126AQ9H061 195 aa4.4□□□□□ -1.71
LRP6-204ENST00000540415 RAB5BP61020 215 aa4.39□□□□□ -1.71
LRP6-204ENST00000540415 PCOTHQ58A44 107 aa4.39□□□□□ -1.71
LRP6-204ENST00000540415 LINC01551Q86U37 167 aa4.39□□□□□ -1.71
LRP6-204ENST00000540415 NKAPP1Q8N9T2 125 aa4.39□□□□□ -1.71
LRP6-204ENST00000540415 CDKN2A-AS1Q9UH64 79 aa4.39□□□□□ -1.71
LRP6-204ENST00000540415 PYGO1Q9Y3Y4 419 aa4.39□□□□□ -1.71
LRP6-204ENST00000540415 V9GYV3 84 aa4.39□□□□□ -1.71
LRP6-204ENST00000540415 M0R2T5 61 aa4.38□□□□□ -1.71
LRP6-204ENST00000540415 M0R378 163 aa4.38□□□□□ -1.71
LRP6-204ENST00000540415 TEX43Q6ZNM6 134 aa4.38□□□□□ -1.71
LRP6-204ENST00000540415 CBLN2Q8IUK8 224 aa4.38□□□□□ -1.71
LRP6-204ENST00000540415 SPRR4Q96PI1 79 aa4.38□□□□□ -1.71
LRP6-204ENST00000540415 HIGD2AQ9BW72 106 aa4.38□□□□□ -1.71
LRP6-204ENST00000540415 OSTCQ9NRP0 149 aa4.38□□□□□ -1.71
LRP6-204ENST00000540415 IGLV8-61A0A075B6I0 122 aa4.37□□□□□ -1.71
LRP6-204ENST00000540415 LINC00862A6NCI5 91 aa4.37□□□□□ -1.71
LRP6-204ENST00000540415 TMEM250H0YL14 139 aa4.37□□□□□ -1.71
LRP6-204ENST00000540415 Q8NDZ9 215 aa4.37□□□□□ -1.71
LRP6-204ENST00000540415 AMELXQ99217 191 aa4.37□□□□□ -1.71
LRP6-204ENST00000540415 TAGLN2P37802 199 aaKnown RBP4.36□□□□□ -1.71
LRP6-204ENST00000540415 C2orf66Q6UXQ4 117 aa4.36□□□□□ -1.71
LRP6-204ENST00000540415 Q8N377 158 aa4.36□□□□□ -1.71
LRP6-204ENST00000540415 SMIM7Q9BQ49 75 aa4.36□□□□□ -1.71
LRP6-204ENST00000540415 C2orf88Q9BSF0 95 aa4.36□□□□□ -1.71
LRP6-204ENST00000540415 A0A1B0GVG6 124 aa4.35□□□□□ -1.71
LRP6-204ENST00000540415 SMIM1B2RUZ4 78 aa4.35□□□□□ -1.71
LRP6-204ENST00000540415 SPINK1P00995 79 aa4.35□□□□□ -1.71
LRP6-204ENST00000540415 VPREB1P12018 145 aa4.35□□□□□ -1.71
LRP6-204ENST00000540415 RAB5AP20339 215 aa4.35□□□□□ -1.71
LRP6-204ENST00000540415 FAM74A3Q4VXF1 159 aa4.35□□□□□ -1.71
LRP6-204ENST00000540415 FAM19A3Q7Z5A8 133 aa4.35□□□□□ -1.71
LRP6-204ENST00000540415 VCX2Q9H322 139 aa4.35□□□□□ -1.71
LRP6-204ENST00000540415 NAT8BQ9UHF3 227 aa4.35□□□□□ -1.71
LRP6-204ENST00000540415 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.71
LRP6-204ENST00000540415 LOC389332A0A1B0GUA5 103 aa4.34□□□□□ -1.71
LRP6-204ENST00000540415 MRPL54Q6P161 138 aaKnown RBP4.34□□□□□ -1.71
LRP6-204ENST00000540415 COX7B2Q8TF08 81 aa4.34□□□□□ -1.71
LRP6-204ENST00000540415 IGIPA6NJ69 53 aa4.33□□□□□ -1.72
LRP6-204ENST00000540415 CXCL5P42830 114 aa4.33□□□□□ -1.72
LRP6-204ENST00000540415 GNB1LQ9BYB4 327 aa4.33□□□□□ -1.72
LRP6-204ENST00000540415 NDUFA12Q9UI09 145 aa4.33□□□□□ -1.72
LRP6-204ENST00000540415 A0A1B0GXF2 115 aa4.32□□□□□ -1.72
LRP6-204ENST00000540415 SMIM27A0A1W2PRY6 76 aa4.32□□□□□ -1.72
LRP6-204ENST00000540415 KRTAP4-16G5E9R7 235 aaPredicted RBP4.32□□□□□ -1.72
LRP6-204ENST00000540415 PFN2P35080 140 aa4.32□□□□□ -1.72
LRP6-204ENST00000540415 HERVK_113P63121 156 aa4.32□□□□□ -1.72
LRP6-204ENST00000540415 PET117Q6UWS5 81 aa4.32□□□□□ -1.72
LRP6-204ENST00000540415 TMEM136Q6ZRR5 245 aa4.32□□□□□ -1.72
LRP6-204ENST00000540415 PRELID3AQ96N28 172 aa4.32□□□□□ -1.72
LRP6-204ENST00000540415 GEMIN7Q9H840 131 aaKnown RBP4.32□□□□□ -1.72
LRP6-204ENST00000540415 CYSLTR1Q9Y271 337 aa4.32□□□□□ -1.72
LRP6-204ENST00000540415 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
LRP6-204ENST00000540415 A4D1N5 150 aa4.31□□□□□ -1.72
LRP6-204ENST00000540415 C9orf92A6NGG3 77 aa4.31□□□□□ -1.72
LRP6-204ENST00000540415 SRP19P09132 144 aaKnown RBP4.31□□□□□ -1.72
LRP6-204ENST00000540415 SPINK8P0C7L1 97 aa4.31□□□□□ -1.72
LRP6-204ENST00000540415 RAB14P61106 215 aa4.31□□□□□ -1.72
LRP6-204ENST00000540415 RPL23P62829 140 aaKnown RBP4.31□□□□□ -1.72
LRP6-204ENST00000540415 MOBPQ13875 183 aa4.31□□□□□ -1.72
LRP6-204ENST00000540415 ORMDL3Q8N138 153 aa4.31□□□□□ -1.72
LRP6-204ENST00000540415 SND1-IT1Q9HBX3 110 aa4.31□□□□□ -1.72
LRP6-204ENST00000540415 IGLV9-49A0A0B4J1Y8 123 aa4.3□□□□□ -1.72
LRP6-204ENST00000540415 A0A1B0GW15 77 aa4.3□□□□□ -1.72
LRP6-204ENST00000540415 PDZD11Q5EBL8 140 aa4.3□□□□□ -1.72
LRP6-204ENST00000540415 FAM19A2Q8N3H0 131 aa4.3□□□□□ -1.72
LRP6-204ENST00000540415 SMCR5Q8TEV8 140 aa4.3□□□□□ -1.72
LRP6-204ENST00000540415 F8W036 122 aa4.29□□□□□ -1.72
LRP6-204ENST00000540415 SLC25A20O43772 301 aa4.29□□□□□ -1.72
LRP6-204ENST00000540415 PPBPP02775 128 aa4.29□□□□□ -1.72
LRP6-204ENST00000540415 ADIRFQ15847 76 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms