RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 Q9HAA7 133 aa7.97□□□□□ -1.13
C11orf54-214ENST00000540113 IGLV10-54A0A075B6I4 117 aa7.97□□□□□ -1.13
C11orf54-214ENST00000540113 SMIM9A6NGZ8 99 aa7.97□□□□□ -1.13
C11orf54-214ENST00000540113 CCL18P55774 89 aa7.97□□□□□ -1.13
C11orf54-214ENST00000540113 LINC01600Q96MT4 127 aa7.97□□□□□ -1.13
C11orf54-214ENST00000540113 PRO0255Q9UI72 69 aa7.97□□□□□ -1.13
C11orf54-214ENST00000540113 TEP1Q99973 2627 aaKnown RBP7.96□□□□□ -1.13
C11orf54-214ENST00000540113 C6orf226Q5I0X4 101 aa7.96□□□□□ -1.14
C11orf54-214ENST00000540113 COPS9Q8WXC6 57 aa7.96□□□□□ -1.14
C11orf54-214ENST00000540113 CELA1Q9UNI1 258 aa7.96□□□□□ -1.14
C11orf54-214ENST00000540113 IGHV4-28A0A0C4DH34 117 aa7.95□□□□□ -1.14
C11orf54-214ENST00000540113 CRPP02741 224 aa7.95□□□□□ -1.14
C11orf54-214ENST00000540113 HTN3P15516 51 aa7.95□□□□□ -1.14
C11orf54-214ENST00000540113 TTC32Q5I0X7 151 aa7.95□□□□□ -1.14
C11orf54-214ENST00000540113 LINC00269Q8N2A0 174 aa7.95□□□□□ -1.14
C11orf54-214ENST00000540113 SS18Q15532 418 aa7.94□□□□□ -1.14
C11orf54-214ENST00000540113 C15orf53Q8NAA6 179 aa7.94□□□□□ -1.14
C11orf54-214ENST00000540113 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
C11orf54-214ENST00000540113 TRAV26-1A0A087WT03 109 aa7.93□□□□□ -1.14
C11orf54-214ENST00000540113 A0A1B0GV72 72 aa7.93□□□□□ -1.14
C11orf54-214ENST00000540113 CYSRT1A8MQ03 144 aa7.93□□□□□ -1.14
C11orf54-214ENST00000540113 LYRM9A8MSI8 78 aa7.93□□□□□ -1.14
C11orf54-214ENST00000540113 SNCGO76070 127 aa7.93□□□□□ -1.14
C11orf54-214ENST00000540113 BAALC-AS2P0C853 105 aa7.93□□□□□ -1.14
C11orf54-214ENST00000540113 A0A087WYN8 130 aa7.92□□□□□ -1.14
C11orf54-214ENST00000540113 TRAV13-2A0A0B4J235 113 aa7.92□□□□□ -1.14
C11orf54-214ENST00000540113 ATP5G1P05496 136 aa7.92□□□□□ -1.14
C11orf54-214ENST00000540113 DAD1P61803 113 aa7.92□□□□□ -1.14
C11orf54-214ENST00000540113 PRR3P79522 188 aaKnown RBP7.92□□□□□ -1.14
C11orf54-214ENST00000540113 OR13C6PQ8NH95 151 aa7.92□□□□□ -1.14
C11orf54-214ENST00000540113 C22orf24Q9Y442 160 aa7.92□□□□□ -1.14
C11orf54-214ENST00000540113 IBA57-AS1B1ANH7 110 aa7.92□□□□□ -1.14
C11orf54-214ENST00000540113 ANGP03950 147 aaKnown RBP7.92□□□□□ -1.14
C11orf54-214ENST00000540113 APOC4P55056 127 aa7.92□□□□□ -1.14
C11orf54-214ENST00000540113 A0A1B0GUV1 79 aa7.91□□□□□ -1.14
C11orf54-214ENST00000540113 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
C11orf54-214ENST00000540113 Q8NAQ8 132 aa7.91□□□□□ -1.14
C11orf54-214ENST00000540113 WFDC9Q8NEX5 89 aa7.91□□□□□ -1.14
C11orf54-214ENST00000540113 RPL28P46779 137 aaKnown RBP7.91□□□□□ -1.14
C11orf54-214ENST00000540113 CHCHD10Q8WYQ3 142 aaPredicted RBP7.9□□□□□ -1.15
C11orf54-214ENST00000540113 LINC00526Q96FQ7 95 aa7.9□□□□□ -1.15
C11orf54-214ENST00000540113 WIPF1O43516 503 aa7.89□□□□□ -1.15
C11orf54-214ENST00000540113 TRACP01848 142 aa7.89□□□□□ -1.15
C11orf54-214ENST00000540113 GAGE2BQ13066 116 aa7.89□□□□□ -1.15
C11orf54-214ENST00000540113 GAGE2EQ4V326 116 aa7.89□□□□□ -1.15
C11orf54-214ENST00000540113 DEFB121Q5J5C9 76 aa7.89□□□□□ -1.15
C11orf54-214ENST00000540113 GAGE2DQ9UEU5 116 aa7.89□□□□□ -1.15
C11orf54-214ENST00000540113 REG3AQ06141 175 aa7.89□□□□□ -1.15
C11orf54-214ENST00000540113 C9orf129Q5T035 196 aaKnown RBP7.89□□□□□ -1.15
C11orf54-214ENST00000540113 SLPIP03973 132 aa7.88□□□□□ -1.15
C11orf54-214ENST00000540113 IGHV4-30-4P0DP06 118 aa7.88□□□□□ -1.15
C11orf54-214ENST00000540113 KRTAP24-1Q3LI83 254 aa7.88□□□□□ -1.15
C11orf54-214ENST00000540113 Q8IZM0 81 aa7.88□□□□□ -1.15
C11orf54-214ENST00000540113 ANAPC13Q9BS18 74 aa7.88□□□□□ -1.15
C11orf54-214ENST00000540113 MIFP14174 115 aa7.87□□□□□ -1.15
C11orf54-214ENST00000540113 KIAA0087Q14695 138 aa7.87□□□□□ -1.15
C11orf54-214ENST00000540113 LECT2O14960 151 aa7.87□□□□□ -1.15
C11orf54-214ENST00000540113 MALP21145 153 aa7.87□□□□□ -1.15
C11orf54-214ENST00000540113 C6orf223Q8N319 242 aa7.87□□□□□ -1.15
C11orf54-214ENST00000540113 F8P00451 2351 aa7.86□□□□□ -1.15
C11orf54-214ENST00000540113 CD164L2Q6UWJ8 174 aa7.86□□□□□ -1.15
C11orf54-214ENST00000540113 SMCR5Q8TEV8 140 aa7.86□□□□□ -1.15
C11orf54-214ENST00000540113 PPDPFQ9H3Y8 114 aa7.86□□□□□ -1.15
C11orf54-214ENST00000540113 FLNBO75369 2602 aaKnown RBP7.86□□□□□ -1.15
C11orf54-214ENST00000540113 RETNQ9HD89 108 aa7.86□□□□□ -1.15
C11orf54-214ENST00000540113 NHLRC4P0CG21 123 aaPredicted RBP7.85□□□□□ -1.15
C11orf54-214ENST00000540113 Q8NDZ9 215 aa7.85□□□□□ -1.15
C11orf54-214ENST00000540113 DNAL4O96015 105 aa7.84□□□□□ -1.15
C11orf54-214ENST00000540113 C10orf25Q5T742 122 aa7.84□□□□□ -1.15
C11orf54-214ENST00000540113 SPART-AS1P0CW21 52 aa7.84□□□□□ -1.15
C11orf54-214ENST00000540113 KLK12Q9UKR0 248 aa7.84□□□□□ -1.15
C11orf54-214ENST00000540113 PKD1L1Q8TDX9 2849 aa7.84□□□□□ -1.15
C11orf54-214ENST00000540113 NDUFV3P56181 108 aaKnown RBP7.83□□□□□ -1.16
C11orf54-214ENST00000540113 KRTAP10-11P60412 298 aa7.83□□□□□ -1.16
C11orf54-214ENST00000540113 GAGE2AQ6NT46 116 aa7.83□□□□□ -1.16
C11orf54-214ENST00000540113 FAM240AA0A1B0GVK7 77 aa7.83□□□□□ -1.16
C11orf54-214ENST00000540113 NCR3O14931 201 aa7.83□□□□□ -1.16
C11orf54-214ENST00000540113 NANOS2P60321 138 aaKnown RBP7.82□□□□□ -1.16
C11orf54-214ENST00000540113 UNQ6190/PRO20217Q6UXQ8 127 aa7.82□□□□□ -1.16
C11orf54-214ENST00000540113 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
C11orf54-214ENST00000540113 MRPL23Q16540 153 aaKnown RBP7.82□□□□□ -1.16
C11orf54-214ENST00000540113 BAHCC1Q9P281 2608 aa7.81□□□□□ -1.16
C11orf54-214ENST00000540113 H0YGX0 51 aa7.81□□□□□ -1.16
C11orf54-214ENST00000540113 C3orf56Q8N813 242 aa7.81□□□□□ -1.16
C11orf54-214ENST00000540113 LELP1Q5T871 98 aa7.8□□□□□ -1.16
C11orf54-214ENST00000540113 LINC01561Q8N1V8 128 aa7.8□□□□□ -1.16
C11orf54-214ENST00000540113 C1orf43Q9BWL3 253 aa7.8□□□□□ -1.16
C11orf54-214ENST00000540113 SPAG11BQ08648 103 aa7.79□□□□□ -1.16
C11orf54-214ENST00000540113 ENHOQ6UWT2 76 aa7.79□□□□□ -1.16
C11orf54-214ENST00000540113 CMYA5Q8N3K9 4069 aa7.79□□□□□ -1.16
C11orf54-214ENST00000540113 CCDC179H3BU77 68 aa7.79□□□□□ -1.16
C11orf54-214ENST00000540113 Q6Q795 121 aa7.78□□□□□ -1.16
C11orf54-214ENST00000540113 LYPD5Q6UWN5 251 aa7.78□□□□□ -1.16
C11orf54-214ENST00000540113 TENM3Q9P273 2699 aa7.77□□□□□ -1.17
C11orf54-214ENST00000540113 ACYP1P07311 99 aa7.77□□□□□ -1.17
C11orf54-214ENST00000540113 WFDC10BQ8IUB3 73 aa7.77□□□□□ -1.17
C11orf54-214ENST00000540113 FBN1P35555 2871 aaKnown RBP7.77□□□□□ -1.17
C11orf54-214ENST00000540113 ANK2Q01484 3957 aa7.77□□□□□ -1.17
C11orf54-214ENST00000540113 INAFM2P0DMQ5 153 aa7.77□□□□□ -1.17
C11orf54-214ENST00000540113 B5MCH6 92 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 352.4 ms