RNA–Protein interactions for RNA: ENST00000539611.1

ARF3-206, Transcript of ADP ribosylation factor 3, humanhuman

TSL 5

Gene ARF3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-206ENST00000539611 SMIM1B2RUZ4 78 aa13.38□□□□□ -0.27
ARF3-206ENST00000539611 Q6ZRP5 223 aa13.38□□□□□ -0.27
ARF3-206ENST00000539611 PACRGQ96M98 296 aaPredicted RBP13.38□□□□□ -0.27
ARF3-206ENST00000539611 TOMM7Q9P0U1 55 aa13.38□□□□□ -0.27
ARF3-206ENST00000539611 A0A1W2PNN7 141 aa13.37□□□□□ -0.27
ARF3-206ENST00000539611 HNRNPA3P51991 378 aaKnown RBP13.37□□□□□ -0.27
ARF3-206ENST00000539611 ATP5LO75964 103 aa13.36□□□□□ -0.27
ARF3-206ENST00000539611 PRSS2P07478 247 aa13.36□□□□□ -0.27
ARF3-206ENST00000539611 IGLC3P0DOY3 106 aa13.36□□□□□ -0.27
ARF3-206ENST00000539611 C6orf226Q5I0X4 101 aa13.36□□□□□ -0.27
ARF3-206ENST00000539611 C7orf33Q8WU49 177 aa13.35□□□□□ -0.27
ARF3-206ENST00000539611 NDUFA6P56556 154 aa13.34□□□□□ -0.27
ARF3-206ENST00000539611 CKS1BP61024 79 aa13.34□□□□□ -0.27
ARF3-206ENST00000539611 C9orf116Q5BN46 136 aaPredicted RBP13.34□□□□□ -0.27
ARF3-206ENST00000539611 LRP1Q07954 4544 aaKnown RBP13.34□□□□□ -0.27
ARF3-206ENST00000539611 FAT3Q8TDW7 4589 aa13.33□□□□□ -0.28
ARF3-206ENST00000539611 NDUFC2-KCTD14E9PQ53 114 aa13.32□□□□□ -0.28
ARF3-206ENST00000539611 SPINK8P0C7L1 97 aa13.32□□□□□ -0.28
ARF3-206ENST00000539611 LINC00310P59036 64 aa13.32□□□□□ -0.28
ARF3-206ENST00000539611 BAGE3Q86Y29 109 aa13.32□□□□□ -0.28
ARF3-206ENST00000539611 SCO1O75880 301 aa13.31□□□□□ -0.28
ARF3-206ENST00000539611 COX7B2Q8TF08 81 aa13.31□□□□□ -0.28
ARF3-206ENST00000539611 F8VRH5 84 aa13.3□□□□□ -0.28
ARF3-206ENST00000539611 HSBP1O75506 76 aa13.3□□□□□ -0.28
ARF3-206ENST00000539611 ZNF22P17026 224 aaPredicted RBP13.3□□□□□ -0.28
ARF3-206ENST00000539611 CXCL5P42830 114 aa13.3□□□□□ -0.28
ARF3-206ENST00000539611 GAGE2EQ4V326 116 aa13.3□□□□□ -0.28
ARF3-206ENST00000539611 FAM19A2Q8N3H0 131 aa13.3□□□□□ -0.28
ARF3-206ENST00000539611 GAGE2DQ9UEU5 116 aa13.3□□□□□ -0.28
ARF3-206ENST00000539611 H3BRM9 83 aa13.29□□□□□ -0.28
ARF3-206ENST00000539611 IGLV5-39A0A0G2JS06 123 aa13.28□□□□□ -0.28
ARF3-206ENST00000539611 FAM168BA1KXE4 195 aa13.28□□□□□ -0.28
ARF3-206ENST00000539611 PRR3P79522 188 aaKnown RBP13.28□□□□□ -0.28
ARF3-206ENST00000539611 IFI27L1Q96BM0 104 aa13.28□□□□□ -0.28
ARF3-206ENST00000539611 C11orf86A6NJI1 115 aa13.27□□□□□ -0.29
ARF3-206ENST00000539611 KRTAP29-1A8MX34 341 aaPredicted RBP13.27□□□□□ -0.29
ARF3-206ENST00000539611 SERF1AO75920 110 aa13.27□□□□□ -0.29
ARF3-206ENST00000539611 C9orf129Q5T035 196 aaKnown RBP13.27□□□□□ -0.29
ARF3-206ENST00000539611 KRTAP7-1Q8IUC3 87 aa13.27□□□□□ -0.29
ARF3-206ENST00000539611 HERC1Q15751 4861 aa13.26□□□□□ -0.29
ARF3-206ENST00000539611 TRAV12-1A0A0B4J245 112 aa13.26□□□□□ -0.29
ARF3-206ENST00000539611 NUPR1O60356 82 aa13.25□□□□□ -0.29
ARF3-206ENST00000539611 PHF5AQ7RTV0 110 aaKnown RBP13.25□□□□□ -0.29
ARF3-206ENST00000539611 CHTOPQ9Y3Y2 248 aaKnown RBP13.25□□□□□ -0.29
ARF3-206ENST00000539611 DMBT1Q9UGM3 2413 aaPredicted RBP13.22□□□□□ -0.29
ARF3-206ENST00000539611 TMEM170BQ5T4T1 132 aa13.21□□□□□ -0.29
ARF3-206ENST00000539611 FAM19A5Q7Z5A7 132 aaPredicted RBP13.21□□□□□ -0.29
ARF3-206ENST00000539611 OXTP01178 125 aa13.2□□□□□ -0.3
ARF3-206ENST00000539611 LEPROTL1O95214 131 aa13.19□□□□□ -0.3
ARF3-206ENST00000539611 XAGE1AQ9HD64 81 aa13.19□□□□□ -0.3
ARF3-206ENST00000539611 KRTAP11-1Q8IUC1 163 aa13.18□□□□□ -0.3
ARF3-206ENST00000539611 PSORS1C2Q9UIG4 136 aa13.18□□□□□ -0.3
ARF3-206ENST00000539611 J3QL48 77 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST1H2BKO60814 126 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST1H2BJP06899 126 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST1H2BOP23527 126 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST1H2BBP33778 126 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST1H2BDP58876 126 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 ODF1Q14990 250 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
ARF3-206ENST00000539611 TMEM223A0PJW6 202 aa13.16□□□□□ -0.3
ARF3-206ENST00000539611 M0QXV9 152 aa13.16□□□□□ -0.3
ARF3-206ENST00000539611 SERTAD4-AS1Q5TG53 156 aa13.16□□□□□ -0.3
ARF3-206ENST00000539611 SRSF9Q13242 221 aaKnown RBP eCLIP13.15□□□□□ -0.3
ARF3-206ENST00000539611 HSPB8Q9UJY1 196 aa13.14□□□□□ -0.31
ARF3-206ENST00000539611 FABP4P15090 132 aa13.13□□□□□ -0.31
ARF3-206ENST00000539611 H0Y8G0 127 aa13.12□□□□□ -0.31
ARF3-206ENST00000539611 ZNF625Q96I27 306 aaPredicted RBP13.12□□□□□ -0.31
ARF3-206ENST00000539611 SPINK6Q6UWN8 80 aa13.11□□□□□ -0.31
ARF3-206ENST00000539611 C22orf24Q9Y442 160 aa13.11□□□□□ -0.31
ARF3-206ENST00000539611 C1orf137Q5JT78 98 aa13.1□□□□□ -0.31
ARF3-206ENST00000539611 PFN2P35080 140 aa13.09□□□□□ -0.31
ARF3-206ENST00000539611 SFTA2Q6UW10 78 aa13.09□□□□□ -0.31
ARF3-206ENST00000539611 ERG28Q9UKR5 140 aa13.09□□□□□ -0.31
ARF3-206ENST00000539611 PLA2G2DQ9UNK4 145 aa13.09□□□□□ -0.31
ARF3-206ENST00000539611 MT1HL1P0DM35 61 aa13.07□□□□□ -0.32
ARF3-206ENST00000539611 UBE2BP63146 152 aa13.07□□□□□ -0.32
ARF3-206ENST00000539611 COX17Q14061 63 aa13.07□□□□□ -0.32
ARF3-206ENST00000539611 TP73-AS1Q9UF72 201 aa13.07□□□□□ -0.32
ARF3-206ENST00000539611 IGLV7-43P04211 117 aa13.05□□□□□ -0.32
ARF3-206ENST00000539611 PLNP26678 52 aa13.05□□□□□ -0.32
ARF3-206ENST00000539611 TNXBP22105 4242 aa13.05□□□□□ -0.32
ARF3-206ENST00000539611 IGLV5-37A0A075B6J1 123 aa13.04□□□□□ -0.32
ARF3-206ENST00000539611 LBHQ53QV2 105 aaPredicted RBP13.04□□□□□ -0.32
ARF3-206ENST00000539611 COA6Q5JTJ3 125 aaKnown RBP13.04□□□□□ -0.32
ARF3-206ENST00000539611 MRPL55Q7Z7F7 128 aaKnown RBP13.04□□□□□ -0.32
ARF3-206ENST00000539611 PMCHL2Q9BQD1 86 aa13.04□□□□□ -0.32
ARF3-206ENST00000539611 MAP1LC3CQ9BXW4 147 aa13.04□□□□□ -0.32
ARF3-206ENST00000539611 SND1-IT1Q9HBX3 110 aa13.04□□□□□ -0.32
ARF3-206ENST00000539611 DPM2O94777 84 aa13.03□□□□□ -0.32
ARF3-206ENST00000539611 IGKCP01834 107 aa13.01□□□□□ -0.33
ARF3-206ENST00000539611 S100A1P23297 94 aa13.01□□□□□ -0.33
ARF3-206ENST00000539611 LINC01600Q96MT4 127 aa13.01□□□□□ -0.33
ARF3-206ENST00000539611 TSPEAR-AS2P59090 65 aa13□□□□□ -0.33
ARF3-206ENST00000539611 LINC00167Q96N53 147 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms