RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 TIRAPP58753 221 aa11.93□□□□□ -0.5
PCDHB17P-201ENST00000539533 TMEM101Q96IK0 257 aa11.93□□□□□ -0.5
PCDHB17P-201ENST00000539533 SPART-AS1P0CW21 52 aa11.92□□□□□ -0.5
PCDHB17P-201ENST00000539533 TRBV7-7A0A0K0K1E9 115 aa11.92□□□□□ -0.5
PCDHB17P-201ENST00000539533 DEFB121Q5J5C9 76 aa11.92□□□□□ -0.5
PCDHB17P-201ENST00000539533 PRO0255Q9UI72 69 aa11.92□□□□□ -0.5
PCDHB17P-201ENST00000539533 LINC00694P0DN24 101 aa11.91□□□□□ -0.5
PCDHB17P-201ENST00000539533 GYPEP15421 78 aa11.91□□□□□ -0.5
PCDHB17P-201ENST00000539533 TENM3Q9P273 2699 aa11.9□□□□□ -0.5
PCDHB17P-201ENST00000539533 DGAT2L7PQ6IED9 249 aa11.9□□□□□ -0.5
PCDHB17P-201ENST00000539533 COX6A2Q02221 97 aa11.9□□□□□ -0.51
PCDHB17P-201ENST00000539533 CIRBPQ14011 172 aaKnown RBP11.9□□□□□ -0.51
PCDHB17P-201ENST00000539533 TMEM126AQ9H061 195 aa11.9□□□□□ -0.51
PCDHB17P-201ENST00000539533 FAM236AA0A1B0GUQ0 79 aa11.89□□□□□ -0.51
PCDHB17P-201ENST00000539533 FAM236BA0A1B0GV22 79 aa11.89□□□□□ -0.51
PCDHB17P-201ENST00000539533 ATP5G1P05496 136 aa11.89□□□□□ -0.51
PCDHB17P-201ENST00000539533 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
PCDHB17P-201ENST00000539533 PAX4O43316 350 aa11.88□□□□□ -0.51
PCDHB17P-201ENST00000539533 LINC00308Q8TCZ7 52 aa11.88□□□□□ -0.51
PCDHB17P-201ENST00000539533 Q9H8V8 135 aa11.88□□□□□ -0.51
PCDHB17P-201ENST00000539533 K7EIL1 84 aa11.87□□□□□ -0.51
PCDHB17P-201ENST00000539533 HTN3P15516 51 aa11.87□□□□□ -0.51
PCDHB17P-201ENST00000539533 A0A096LPF7 62 aa11.87□□□□□ -0.51
PCDHB17P-201ENST00000539533 HERVK_113P63121 156 aa11.87□□□□□ -0.51
PCDHB17P-201ENST00000539533 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
PCDHB17P-201ENST00000539533 F5H768 121 aa11.86□□□□□ -0.51
PCDHB17P-201ENST00000539533 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
PCDHB17P-201ENST00000539533 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
PCDHB17P-201ENST00000539533 TRBV6-8A0A0A6YYG3 113 aa11.85□□□□□ -0.51
PCDHB17P-201ENST00000539533 A0A0U1RRA0 63 aa11.84□□□□□ -0.51
PCDHB17P-201ENST00000539533 PPDPFQ9H3Y8 114 aa11.84□□□□□ -0.51
PCDHB17P-201ENST00000539533 KPRPQ5T749 579 aaPredicted RBP11.84□□□□□ -0.51
PCDHB17P-201ENST00000539533 MRAPQ8TCY5 172 aa11.84□□□□□ -0.51
PCDHB17P-201ENST00000539533 SMIM1B2RUZ4 78 aa11.83□□□□□ -0.52
PCDHB17P-201ENST00000539533 UBE2L6O14933 153 aa11.83□□□□□ -0.52
PCDHB17P-201ENST00000539533 COX7A2LO14548 114 aa11.83□□□□□ -0.52
PCDHB17P-201ENST00000539533 SOSTDC1Q6X4U4 206 aa11.83□□□□□ -0.52
PCDHB17P-201ENST00000539533 FAM19A3Q7Z5A8 133 aa11.83□□□□□ -0.52
PCDHB17P-201ENST00000539533 A0A0J9YWU9 116 aa11.82□□□□□ -0.52
PCDHB17P-201ENST00000539533 ACYP1P07311 99 aa11.82□□□□□ -0.52
PCDHB17P-201ENST00000539533 IMUPQ9GZP8 106 aa11.82□□□□□ -0.52
PCDHB17P-201ENST00000539533 C9orf153Q5TBE3 101 aa11.82□□□□□ -0.52
PCDHB17P-201ENST00000539533 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
PCDHB17P-201ENST00000539533 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
PCDHB17P-201ENST00000539533 TRAV13-1A0A0B4J241 112 aa11.81□□□□□ -0.52
PCDHB17P-201ENST00000539533 SMCR5Q8TEV8 140 aa11.81□□□□□ -0.52
PCDHB17P-201ENST00000539533 C11orf68Q9H3H3 251 aaKnown RBP11.81□□□□□ -0.52
PCDHB17P-201ENST00000539533 CDC42SE2Q9NRR3 84 aa11.81□□□□□ -0.52
PCDHB17P-201ENST00000539533 Q6ZTC4 211 aa11.79□□□□□ -0.52
PCDHB17P-201ENST00000539533 C3orf22Q8N5N4 141 aa11.79□□□□□ -0.52
PCDHB17P-201ENST00000539533 LINC00643Q86TS7 51 aa11.78□□□□□ -0.52
PCDHB17P-201ENST00000539533 IGLV4-60A0A075B6I1 120 aa11.77□□□□□ -0.52
PCDHB17P-201ENST00000539533 TM2D3Q9BRN9 247 aa11.77□□□□□ -0.52
PCDHB17P-201ENST00000539533 NANOS2P60321 138 aaKnown RBP11.76□□□□□ -0.53
PCDHB17P-201ENST00000539533 UQCRQO14949 82 aa11.75□□□□□ -0.53
PCDHB17P-201ENST00000539533 TRACP01848 142 aa11.75□□□□□ -0.53
PCDHB17P-201ENST00000539533 HUWE1Q7Z6Z7 4374 aaKnown RBP11.75□□□□□ -0.53
PCDHB17P-201ENST00000539533 C11orf45Q8TAV5 145 aa11.75□□□□□ -0.53
PCDHB17P-201ENST00000539533 LINC00526Q96FQ7 95 aa11.73□□□□□ -0.53
PCDHB17P-201ENST00000539533 IGKV3OR2-268A0A0C4DH90 116 aa11.72□□□□□ -0.53
PCDHB17P-201ENST00000539533 BAALC-AS2P0C853 105 aa11.72□□□□□ -0.53
PCDHB17P-201ENST00000539533 FAM218AQ96MZ4 157 aa11.72□□□□□ -0.53
PCDHB17P-201ENST00000539533 KLK5Q9Y337 293 aaPredicted RBP11.72□□□□□ -0.53
PCDHB17P-201ENST00000539533 LOC107984640A0A0U1RRK4 108 aa11.71□□□□□ -0.53
PCDHB17P-201ENST00000539533 SDIM1Q6ZPB5 146 aa11.7□□□□□ -0.54
PCDHB17P-201ENST00000539533 Q8N3U1 123 aa11.7□□□□□ -0.54
PCDHB17P-201ENST00000539533 C22orf24Q9Y442 160 aa11.7□□□□□ -0.54
PCDHB17P-201ENST00000539533 DEFB131BA0A096LNP1 70 aa11.69□□□□□ -0.54
PCDHB17P-201ENST00000539533 C5orf38Q86SI9 138 aa11.69□□□□□ -0.54
PCDHB17P-201ENST00000539533 DNHD1Q96M86 4753 aa11.69□□□□□ -0.54
PCDHB17P-201ENST00000539533 A0A1B0GUV1 79 aa11.69□□□□□ -0.54
PCDHB17P-201ENST00000539533 CXCL5P42830 114 aa11.69□□□□□ -0.54
PCDHB17P-201ENST00000539533 COL7A1Q02388 2944 aa11.69□□□□□ -0.54
PCDHB17P-201ENST00000539533 TRAV13-2A0A0B4J235 113 aa11.68□□□□□ -0.54
PCDHB17P-201ENST00000539533 GAGE2AQ6NT46 116 aa11.68□□□□□ -0.54
PCDHB17P-201ENST00000539533 COX7CP15954 63 aa11.68□□□□□ -0.54
PCDHB17P-201ENST00000539533 LYPD5Q6UWN5 251 aa11.68□□□□□ -0.54
PCDHB17P-201ENST00000539533 H3BNG1 76 aa11.67□□□□□ -0.54
PCDHB17P-201ENST00000539533 RPL28P46779 137 aaKnown RBP11.67□□□□□ -0.54
PCDHB17P-201ENST00000539533 CRPP02741 224 aa11.67□□□□□ -0.54
PCDHB17P-201ENST00000539533 LELP1Q5T871 98 aa11.67□□□□□ -0.54
PCDHB17P-201ENST00000539533 COX7B2Q8TF08 81 aa11.67□□□□□ -0.54
PCDHB17P-201ENST00000539533 MIR7-3HGQ8N6C7 128 aa11.66□□□□□ -0.54
PCDHB17P-201ENST00000539533 J3KT08 172 aa11.65□□□□□ -0.54
PCDHB17P-201ENST00000539533 CLPSL2Q6UWE3 100 aa11.65□□□□□ -0.54
PCDHB17P-201ENST00000539533 LINC00337Q8N6G1 96 aa11.65□□□□□ -0.54
PCDHB17P-201ENST00000539533 Q9HAA7 133 aa11.65□□□□□ -0.54
PCDHB17P-201ENST00000539533 DNAH9Q9NYC9 4486 aa11.65□□□□□ -0.54
PCDHB17P-201ENST00000539533 INAFM2P0DMQ5 153 aa11.65□□□□□ -0.54
PCDHB17P-201ENST00000539533 IGKV2-28A0A075B6P5 120 aa11.64□□□□□ -0.55
PCDHB17P-201ENST00000539533 IGKV2D-28P01615 120 aa11.64□□□□□ -0.55
PCDHB17P-201ENST00000539533 C2orf48Q96LS8 159 aa11.64□□□□□ -0.55
PCDHB17P-201ENST00000539533 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
PCDHB17P-201ENST00000539533 LINC00959A0A1B0GUT2 108 aa11.64□□□□□ -0.55
PCDHB17P-201ENST00000539533 TOMM7Q9P0U1 55 aa11.64□□□□□ -0.55
PCDHB17P-201ENST00000539533 MALP21145 153 aa11.63□□□□□ -0.55
PCDHB17P-201ENST00000539533 LINC00269Q8N2A0 174 aa11.63□□□□□ -0.55
PCDHB17P-201ENST00000539533 A0A1B0GX51 115 aa11.62□□□□□ -0.55
PCDHB17P-201ENST00000539533 ATOX1O00244 68 aa11.62□□□□□ -0.55
PCDHB17P-201ENST00000539533 ANGP03950 147 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms