RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 UBE2D2P62837 147 aa2.95□□□□□ -1.94
SNHG1-208ENST00000538266 SRSF9Q13242 221 aaKnown RBP eCLIP2.95□□□□□ -1.94
SNHG1-208ENST00000538266 ESRGQ1W209 222 aa2.95□□□□□ -1.94
SNHG1-208ENST00000538266 RPL39LQ96EH5 51 aaKnown RBP2.95□□□□□ -1.94
SNHG1-208ENST00000538266 TMEM141Q96I45 108 aa2.95□□□□□ -1.94
SNHG1-208ENST00000538266 LINC00588Q9Y4M8 146 aa2.95□□□□□ -1.94
SNHG1-208ENST00000538266 TRBV6-8A0A0A6YYG3 113 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 IGHV3-38A0A0C4DH36 116 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 LOC107984156A0A0G2JMH3 177 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 TRBV6-5A0A0K0K1A5 114 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 SDHAF1A6NFY7 115 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 C11orf86A6NJI1 115 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 I3L3M4 83 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 UBE2L6O14933 153 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 LINC00694P0DN24 101 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 MT3P25713 68 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 PSMB2P49721 201 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 PMVKQ15126 192 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 TTC32Q5I0X7 151 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 LELP1Q5T871 98 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 LYPD5Q6UWN5 251 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 TEN1Q86WV5 123 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 ARL17AQ8IVW1 177 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 TIMM17AQ99595 171 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 KIR2DL4Q99706 377 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 CHCHD5Q9BSY4 110 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 UPK3BQ9BT76 320 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 Q9UF83 564 aa2.94□□□□□ -1.94
SNHG1-208ENST00000538266 IGLV4-69A0A075B6H9 119 aa2.93□□□□□ -1.94
SNHG1-208ENST00000538266 SMIM1B2RUZ4 78 aa2.93□□□□□ -1.94
SNHG1-208ENST00000538266 LEPROTO15243 131 aa2.93□□□□□ -1.94
SNHG1-208ENST00000538266 SPINK8P0C7L1 97 aa2.93□□□□□ -1.94
SNHG1-208ENST00000538266 LGALS3P17931 250 aaKnown RBP2.93□□□□□ -1.94
SNHG1-208ENST00000538266 Q6ZUT4 128 aa2.93□□□□□ -1.94
SNHG1-208ENST00000538266 WFDC10BQ8IUB3 73 aa2.93□□□□□ -1.94
SNHG1-208ENST00000538266 PLEKHB2Q96CS7 222 aa2.93□□□□□ -1.94
SNHG1-208ENST00000538266 TMEM243Q9BU79 118 aa2.93□□□□□ -1.94
SNHG1-208ENST00000538266 GEMIN7Q9H840 131 aaKnown RBP2.93□□□□□ -1.94
SNHG1-208ENST00000538266 Q9H8V8 135 aa2.93□□□□□ -1.94
SNHG1-208ENST00000538266 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-208ENST00000538266 A0A0B4J2C4 111 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 TRBV27A0A0K0K1C4 114 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 IGIPA6NJ69 53 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 TMEM262E9PQX1 116 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 J3QQQ9 107 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 IGHV3-30P01768 117 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 IGHV3-33P01772 117 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 DNAH10OSP0CZ25 163 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 IGHV3-30-3P0DP02 117 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 IGHV3-30-5P0DP03 117 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 VPREB1P12018 145 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 TMEM170BQ5T4T1 132 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 C10orf126Q8N4M7 172 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 ANKRD29Q8N6D5 301 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 DEFB104AQ8WTQ1 72 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 PRO1854Q9UHT4 67 aa2.92□□□□□ -1.94
SNHG1-208ENST00000538266 NBDYA0A0U1RRE5 68 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 TMEM223A0PJW6 202 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 H7C423 109 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 M0R2N4 97 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 TCL1BO95988 128 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 TSHBP01222 138 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 CRPP02741 224 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 MT-ATP8P03928 68 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 ANGP03950 147 aaKnown RBP2.91□□□□□ -1.94
SNHG1-208ENST00000538266 CFC1BP0CG36 223 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 CFC1P0CG37 223 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 SCGB1C2P0DMR2 95 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 POLR2KP53803 58 aaKnown RBP2.91□□□□□ -1.94
SNHG1-208ENST00000538266 XGP55808 180 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 TSPEAR-AS2P59090 65 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 ATXN8Q156A1 80 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 Q1RN00 199 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 LINC01556Q5JQF7 62 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 NTM-AS1Q6ZSK4 140 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 CARD19Q96LW7 228 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 CHCHD7Q9BUK0 85 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 ERG28Q9UKR5 140 aa2.91□□□□□ -1.94
SNHG1-208ENST00000538266 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-208ENST00000538266 TRAV8-3A0A0A6YYJ7 113 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 IGKV2-29A2NJV5 120 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-208ENST00000538266 C9JAW5 83 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 SLC25A20O43772 301 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 SNCGO76070 127 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 RPL39P62891 51 aaKnown RBP2.9□□□□□ -1.95
SNHG1-208ENST00000538266 C1orf134Q5TEV5 83 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 SFTA2Q6UW10 78 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 RMI2Q96E14 147 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 TMEM101Q96IK0 257 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 AMELXQ99217 191 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 ANAPC13Q9BS18 74 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 Q9HAA7 133 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 KLK12Q9UKR0 248 aa2.9□□□□□ -1.95
SNHG1-208ENST00000538266 TRAV8-4A0A0B4J246 113 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 A4D1N5 150 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 IBA57-AS1B1ANH7 110 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 PSCAO43653 123 aa2.89□□□□□ -1.95
SNHG1-208ENST00000538266 ZNF22P17026 224 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-208ENST00000538266 RPL13AP40429 203 aaKnown RBP2.89□□□□□ -1.95
SNHG1-208ENST00000538266 LINC01620Q4KN68 170 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms