RNA–Protein interactions for RNA: ENST00000536196.1

CHFR-212, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 597 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-212ENST00000536196 CDKN2A-AS1Q9UH64 79 aa12.89□□□□□ -0.35
CHFR-212ENST00000536196 LINC01549A6NIU2 74 aa12.88□□□□□ -0.35
CHFR-212ENST00000536196 ALKBH7Q9BT30 221 aaPredicted RBP12.88□□□□□ -0.35
CHFR-212ENST00000536196 M0QXV9 152 aa12.87□□□□□ -0.35
CHFR-212ENST00000536196 LINC01546A6NGU7 62 aa12.86□□□□□ -0.35
CHFR-212ENST00000536196 IGLV7-43P04211 117 aa12.86□□□□□ -0.35
CHFR-212ENST00000536196 C9orf129Q5T035 196 aaKnown RBP12.86□□□□□ -0.35
CHFR-212ENST00000536196 KRTAP7-1Q8IUC3 87 aa12.86□□□□□ -0.35
CHFR-212ENST00000536196 RHEBQ15382 184 aa12.85□□□□□ -0.35
CHFR-212ENST00000536196 C10orf91Q5T1B1 145 aa12.85□□□□□ -0.35
CHFR-212ENST00000536196 UBE2BP63146 152 aa12.84□□□□□ -0.35
CHFR-212ENST00000536196 KRTAP11-1Q8IUC1 163 aa12.84□□□□□ -0.35
CHFR-212ENST00000536196 LINC00469Q8N7U9 141 aa12.84□□□□□ -0.35
CHFR-212ENST00000536196 MRPL18Q9H0U6 180 aaKnown RBP12.84□□□□□ -0.35
CHFR-212ENST00000536196 FABP9Q0Z7S8 132 aa12.83□□□□□ -0.36
CHFR-212ENST00000536196 FA2HQ7L5A8 372 aa12.83□□□□□ -0.36
CHFR-212ENST00000536196 DIRC1Q969H9 104 aa12.83□□□□□ -0.36
CHFR-212ENST00000536196 RPS10P5Q9NQ39 176 aa12.83□□□□□ -0.36
CHFR-212ENST00000536196 CARHSP1Q9Y2V2 147 aaKnown RBP12.83□□□□□ -0.36
CHFR-212ENST00000536196 TINCRA0A1B0GVN0 87 aa12.82□□□□□ -0.36
CHFR-212ENST00000536196 F8VRH5 84 aa12.82□□□□□ -0.36
CHFR-212ENST00000536196 CXCL5P42830 114 aa12.82□□□□□ -0.36
CHFR-212ENST00000536196 ODF1Q14990 250 aa12.82□□□□□ -0.36
CHFR-212ENST00000536196 SMCO4Q9NRQ5 59 aa12.82□□□□□ -0.36
CHFR-212ENST00000536196 UBR4Q5T4S7 5183 aa12.8□□□□□ -0.36
CHFR-212ENST00000536196 SMIM1B2RUZ4 78 aa12.8□□□□□ -0.36
CHFR-212ENST00000536196 IGLV5-45A0A087WSX0 123 aa12.79□□□□□ -0.36
CHFR-212ENST00000536196 PDZD11Q5EBL8 140 aa12.79□□□□□ -0.36
CHFR-212ENST00000536196 CST9LQ9H4G1 147 aa12.79□□□□□ -0.36
CHFR-212ENST00000536196 H0Y9J4 135 aa12.78□□□□□ -0.36
CHFR-212ENST00000536196 PMVKQ15126 192 aa12.78□□□□□ -0.36
CHFR-212ENST00000536196 COX7B2Q8TF08 81 aa12.77□□□□□ -0.37
CHFR-212ENST00000536196 XAGE1AQ9HD64 81 aa12.77□□□□□ -0.37
CHFR-212ENST00000536196 C22orf24Q9Y442 160 aa12.75□□□□□ -0.37
CHFR-212ENST00000536196 TRAPPC1Q9Y5R8 145 aa12.74□□□□□ -0.37
CHFR-212ENST00000536196 SPINK8P0C7L1 97 aa12.73□□□□□ -0.37
CHFR-212ENST00000536196 LBHQ53QV2 105 aaPredicted RBP12.73□□□□□ -0.37
CHFR-212ENST00000536196 H3BRM9 83 aa12.72□□□□□ -0.37
CHFR-212ENST00000536196 C18orf32Q8TCD1 76 aa12.72□□□□□ -0.37
CHFR-212ENST00000536196 PRR26Q8N8Z3 221 aa12.71□□□□□ -0.37
CHFR-212ENST00000536196 TP73-AS1Q9UF72 201 aa12.71□□□□□ -0.37
CHFR-212ENST00000536196 A0A096LNJ9 63 aa12.7□□□□□ -0.38
CHFR-212ENST00000536196 NUPR1O60356 82 aa12.7□□□□□ -0.38
CHFR-212ENST00000536196 APOC3P02656 99 aa12.7□□□□□ -0.38
CHFR-212ENST00000536196 LINC00614P0C842 121 aa12.7□□□□□ -0.38
CHFR-212ENST00000536196 IGLC3P0DOY3 106 aa12.69□□□□□ -0.38
CHFR-212ENST00000536196 URB1-AS1Q96HZ7 61 aa12.69□□□□□ -0.38
CHFR-212ENST00000536196 SNAPINO95295 136 aa12.68□□□□□ -0.38
CHFR-212ENST00000536196 HBDP02042 147 aa12.68□□□□□ -0.38
CHFR-212ENST00000536196 NDUFA6P56556 154 aa12.68□□□□□ -0.38
CHFR-212ENST00000536196 NDUFA5Q16718 116 aa12.68□□□□□ -0.38
CHFR-212ENST00000536196 MRPL55Q7Z7F7 128 aaKnown RBP12.68□□□□□ -0.38
CHFR-212ENST00000536196 LRP2P98164 4655 aa12.68□□□□□ -0.38
CHFR-212ENST00000536196 IGLV1-50A0A075B6I6 118 aa12.67□□□□□ -0.38
CHFR-212ENST00000536196 SVBPQ8N300 66 aa12.67□□□□□ -0.38
CHFR-212ENST00000536196 ZNF861PO60384 105 aa12.66□□□□□ -0.38
CHFR-212ENST00000536196 ATP5LO75964 103 aa12.66□□□□□ -0.38
CHFR-212ENST00000536196 KRTAP1-4P0C5Y4 121 aa12.66□□□□□ -0.38
CHFR-212ENST00000536196 RAB5BP61020 215 aa12.66□□□□□ -0.38
CHFR-212ENST00000536196 IGLV5-39A0A0G2JS06 123 aa12.64□□□□□ -0.39
CHFR-212ENST00000536196 ZNF22P17026 224 aaPredicted RBP12.64□□□□□ -0.39
CHFR-212ENST00000536196 PMCHL1Q16048 86 aa12.64□□□□□ -0.39
CHFR-212ENST00000536196 LINC00167Q96N53 147 aa12.62□□□□□ -0.39
CHFR-212ENST00000536196 IGLV5-37A0A075B6J1 123 aa12.61□□□□□ -0.39
CHFR-212ENST00000536196 RPL13AP40429 203 aaKnown RBP12.61□□□□□ -0.39
CHFR-212ENST00000536196 BCE1O60756 84 aa12.6□□□□□ -0.39
CHFR-212ENST00000536196 NKAPP1Q8N9T2 125 aa12.6□□□□□ -0.39
CHFR-212ENST00000536196 RPL37AP8A6NKH3 93 aa12.59□□□□□ -0.39
CHFR-212ENST00000536196 RPL28P46779 137 aaKnown RBP12.59□□□□□ -0.39
CHFR-212ENST00000536196 BAGE3Q86Y29 109 aa12.59□□□□□ -0.39
CHFR-212ENST00000536196 GAGE10A6NGK3 116 aa12.58□□□□□ -0.4
CHFR-212ENST00000536196 PFN2P35080 140 aa12.58□□□□□ -0.4
CHFR-212ENST00000536196 C11orf86A6NJI1 115 aa12.57□□□□□ -0.4
CHFR-212ENST00000536196 TMEM170BQ5T4T1 132 aa12.57□□□□□ -0.4
CHFR-212ENST00000536196 ERG28Q9UKR5 140 aa12.57□□□□□ -0.4
CHFR-212ENST00000536196 YPEL4Q96NS1 127 aa12.56□□□□□ -0.4
CHFR-212ENST00000536196 COX17Q14061 63 aa12.55□□□□□ -0.4
CHFR-212ENST00000536196 SFTA2Q6UW10 78 aa12.55□□□□□ -0.4
CHFR-212ENST00000536196 CHCHD1Q96BP2 118 aaKnown RBP12.54□□□□□ -0.4
CHFR-212ENST00000536196 CHTOPQ9Y3Y2 248 aaKnown RBP12.54□□□□□ -0.4
CHFR-212ENST00000536196 SND1-IT1Q9HBX3 110 aa12.53□□□□□ -0.4
CHFR-212ENST00000536196 ZNF625Q96I27 306 aaPredicted RBP12.52□□□□□ -0.41
CHFR-212ENST00000536196 IGKV2-28A0A075B6P5 120 aa12.5□□□□□ -0.41
CHFR-212ENST00000536196 TRAV12-1A0A0B4J245 112 aa12.5□□□□□ -0.41
CHFR-212ENST00000536196 SCO1O75880 301 aa12.5□□□□□ -0.41
CHFR-212ENST00000536196 IGKV2D-28P01615 120 aa12.5□□□□□ -0.41
CHFR-212ENST00000536196 VPREB1P12018 145 aa12.5□□□□□ -0.41
CHFR-212ENST00000536196 UBE2AP49459 152 aa12.5□□□□□ -0.41
CHFR-212ENST00000536196 RPL24P83731 157 aaKnown RBP12.5□□□□□ -0.41
CHFR-212ENST00000536196 IFI27L1Q96BM0 104 aa12.5□□□□□ -0.41
CHFR-212ENST00000536196 KRTAP13-1Q8IUC0 172 aa12.48□□□□□ -0.41
CHFR-212ENST00000536196 TMEM223A0PJW6 202 aa12.47□□□□□ -0.41
CHFR-212ENST00000536196 CBLN2Q8IUK8 224 aa12.46□□□□□ -0.41
CHFR-212ENST00000536196 A0A087X002 238 aa12.45□□□□□ -0.42
CHFR-212ENST00000536196 HSBP1O75506 76 aa12.45□□□□□ -0.42
CHFR-212ENST00000536196 CRYGAP11844 174 aa12.45□□□□□ -0.42
CHFR-212ENST00000536196 LINC00158P58513 81 aa12.44□□□□□ -0.42
CHFR-212ENST00000536196 LPAP08519 4548 aa12.44□□□□□ -0.42
CHFR-212ENST00000536196 FAM19A2Q8N3H0 131 aa12.43□□□□□ -0.42
CHFR-212ENST00000536196 RNF213Q63HN8 5207 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms