RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 OXLD1Q5BKU9 147 aa12.39□□□□□ -0.43
PHRF1-206ENST00000534320 KPRPQ5T749 579 aaPredicted RBP12.39□□□□□ -0.43
PHRF1-206ENST00000534320 SMIM11BQ8TCY0 68 aa12.39□□□□□ -0.43
PHRF1-206ENST00000534320 PPDPFQ9H3Y8 114 aa12.38□□□□□ -0.43
PHRF1-206ENST00000534320 LINC00242Q5T6M2 205 aa12.38□□□□□ -0.43
PHRF1-206ENST00000534320 Q8N2B8 174 aa12.38□□□□□ -0.43
PHRF1-206ENST00000534320 PRYO14603 147 aa12.37□□□□□ -0.43
PHRF1-206ENST00000534320 FAM30AQ9NZY2 134 aa12.37□□□□□ -0.43
PHRF1-206ENST00000534320 BEAN1Q3B7T3 259 aa12.37□□□□□ -0.43
PHRF1-206ENST00000534320 POM121L12Q8N7R1 296 aa12.36□□□□□ -0.43
PHRF1-206ENST00000534320 A0A087WVE0 104 aa12.36□□□□□ -0.43
PHRF1-206ENST00000534320 TRAV10A0A0B4J240 114 aa12.36□□□□□ -0.43
PHRF1-206ENST00000534320 FAM19A1Q7Z5A9 133 aa12.36□□□□□ -0.43
PHRF1-206ENST00000534320 XAGE1AQ9HD64 81 aa12.36□□□□□ -0.43
PHRF1-206ENST00000534320 A0A096LNI7 61 aa12.35□□□□□ -0.43
PHRF1-206ENST00000534320 NTM-AS1Q6ZSK4 140 aa12.35□□□□□ -0.43
PHRF1-206ENST00000534320 COL27A1Q8IZC6 1860 aaPredicted RBP12.35□□□□□ -0.43
PHRF1-206ENST00000534320 MTORP42345 2549 aa12.34□□□□□ -0.43
PHRF1-206ENST00000534320 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.34□□□□□ -0.43
PHRF1-206ENST00000534320 Q6ZSN1 163 aa12.34□□□□□ -0.43
PHRF1-206ENST00000534320 IL17DQ8TAD2 202 aa12.34□□□□□ -0.43
PHRF1-206ENST00000534320 DHRS4-AS1Q9P1J3 65 aa12.33□□□□□ -0.44
PHRF1-206ENST00000534320 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
PHRF1-206ENST00000534320 IGKV2-24A0A0C4DH68 120 aa12.33□□□□□ -0.44
PHRF1-206ENST00000534320 PSPHP1O15172 72 aa12.33□□□□□ -0.44
PHRF1-206ENST00000534320 C14orf177Q52M58 125 aa12.33□□□□□ -0.44
PHRF1-206ENST00000534320 AMELXQ99217 191 aa12.32□□□□□ -0.44
PHRF1-206ENST00000534320 TSPEAR-AS2P59090 65 aa12.32□□□□□ -0.44
PHRF1-206ENST00000534320 FHL2Q14192 279 aa12.32□□□□□ -0.44
PHRF1-206ENST00000534320 ANKRD17O75179 2603 aaKnown RBP12.32□□□□□ -0.44
PHRF1-206ENST00000534320 SYCNQ0VAF6 134 aa12.31□□□□□ -0.44
PHRF1-206ENST00000534320 CELA1Q9UNI1 258 aa12.31□□□□□ -0.44
PHRF1-206ENST00000534320 FAM19A4Q96LR4 140 aa12.31□□□□□ -0.44
PHRF1-206ENST00000534320 SMIM1B2RUZ4 78 aa12.3□□□□□ -0.44
PHRF1-206ENST00000534320 TRBV7-7A0A0K0K1E9 115 aa12.3□□□□□ -0.44
PHRF1-206ENST00000534320 TRANK1O15050 2925 aa12.3□□□□□ -0.44
PHRF1-206ENST00000534320 MKI67P46013 3256 aaKnown RBP12.29□□□□□ -0.44
PHRF1-206ENST00000534320 VPREB1P12018 145 aa12.29□□□□□ -0.44
PHRF1-206ENST00000534320 Q8IZM0 81 aa12.29□□□□□ -0.44
PHRF1-206ENST00000534320 LINC00208Q96KT6 92 aa12.29□□□□□ -0.44
PHRF1-206ENST00000534320 COX6A2Q02221 97 aa12.29□□□□□ -0.44
PHRF1-206ENST00000534320 M0R378 163 aa12.29□□□□□ -0.44
PHRF1-206ENST00000534320 TRBV7-6A0A0J9YX20 115 aa12.28□□□□□ -0.44
PHRF1-206ENST00000534320 IGLV4-60A0A075B6I1 120 aa12.27□□□□□ -0.44
PHRF1-206ENST00000534320 MUC7Q8TAX7 377 aa12.27□□□□□ -0.44
PHRF1-206ENST00000534320 Q8N3U1 123 aa12.27□□□□□ -0.44
PHRF1-206ENST00000534320 EPG5Q9HCE0 2579 aa12.27□□□□□ -0.45
PHRF1-206ENST00000534320 NANOS2P60321 138 aaKnown RBP12.27□□□□□ -0.45
PHRF1-206ENST00000534320 RPS28P62857 69 aaKnown RBP12.26□□□□□ -0.45
PHRF1-206ENST00000534320 LINC01546A6NGU7 62 aa12.26□□□□□ -0.45
PHRF1-206ENST00000534320 KLK9Q2XQG4 91 aa12.25□□□□□ -0.45
PHRF1-206ENST00000534320 RPL28P46779 137 aaKnown RBP12.25□□□□□ -0.45
PHRF1-206ENST00000534320 COX17Q14061 63 aa12.25□□□□□ -0.45
PHRF1-206ENST00000534320 ESRGQ1W209 222 aa12.25□□□□□ -0.45
PHRF1-206ENST00000534320 C11orf72Q8NBR9 251 aa12.25□□□□□ -0.45
PHRF1-206ENST00000534320 LINC00315P59091 139 aa12.24□□□□□ -0.45
PHRF1-206ENST00000534320 A0A087WZ39 114 aa12.24□□□□□ -0.45
PHRF1-206ENST00000534320 ZNF73O43830 326 aaPredicted RBP12.24□□□□□ -0.45
PHRF1-206ENST00000534320 TMEM254Q8TBM7 123 aa12.24□□□□□ -0.45
PHRF1-206ENST00000534320 CDIP1Q9H305 208 aa12.24□□□□□ -0.45
PHRF1-206ENST00000534320 FASNP49327 2511 aaKnown RBP12.23□□□□□ -0.45
PHRF1-206ENST00000534320 SERTAD4-AS1Q5TG53 156 aa12.22□□□□□ -0.45
PHRF1-206ENST00000534320 AGRNO00468 2067 aa12.22□□□□□ -0.45
PHRF1-206ENST00000534320 LAMA3Q16787 3333 aa12.22□□□□□ -0.45
PHRF1-206ENST00000534320 CYSRT1A8MQ03 144 aa12.22□□□□□ -0.45
PHRF1-206ENST00000534320 ACANP16112 2415 aa12.21□□□□□ -0.45
PHRF1-206ENST00000534320 ADAMTSL4-AS1Q5T5F5 129 aa12.21□□□□□ -0.46
PHRF1-206ENST00000534320 Q8N814 137 aa12.21□□□□□ -0.46
PHRF1-206ENST00000534320 CRYGAP11844 174 aa12.2□□□□□ -0.46
PHRF1-206ENST00000534320 FHL3Q13643 280 aa12.19□□□□□ -0.46
PHRF1-206ENST00000534320 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.19□□□□□ -0.46
PHRF1-206ENST00000534320 IGKV2-28A0A075B6P5 120 aa12.18□□□□□ -0.46
PHRF1-206ENST00000534320 IGKV2D-28P01615 120 aa12.18□□□□□ -0.46
PHRF1-206ENST00000534320 LIMD2Q9BT23 127 aa12.18□□□□□ -0.46
PHRF1-206ENST00000534320 FSHBP01225 129 aa12.18□□□□□ -0.46
PHRF1-206ENST00000534320 UNQ6190/PRO20217Q6UXQ8 127 aa12.18□□□□□ -0.46
PHRF1-206ENST00000534320 Q6ZTC4 211 aa12.17□□□□□ -0.46
PHRF1-206ENST00000534320 A0A1B0GUV1 79 aa12.16□□□□□ -0.46
PHRF1-206ENST00000534320 TRBV10-3A0A0K0K1G6 114 aa12.16□□□□□ -0.46
PHRF1-206ENST00000534320 BRCA2P51587 3418 aa12.15□□□□□ -0.46
PHRF1-206ENST00000534320 SPINK6Q6UWN8 80 aa12.15□□□□□ -0.46
PHRF1-206ENST00000534320 C9orf116Q5BN46 136 aaPredicted RBP12.14□□□□□ -0.47
PHRF1-206ENST00000534320 ZNF706Q9Y5V0 76 aaPredicted RBP12.13□□□□□ -0.47
PHRF1-206ENST00000534320 hDV103S1A0JD37 113 aa12.13□□□□□ -0.47
PHRF1-206ENST00000534320 C4orf26Q17RF5 130 aa12.13□□□□□ -0.47
PHRF1-206ENST00000534320 A0A087WYN8 130 aa12.13□□□□□ -0.47
PHRF1-206ENST00000534320 LINC00846Q9NV44 126 aa12.12□□□□□ -0.47
PHRF1-206ENST00000534320 C1orf137Q5JT78 98 aa12.11□□□□□ -0.47
PHRF1-206ENST00000534320 LINC01547P58512 204 aaPredicted RBP12.11□□□□□ -0.47
PHRF1-206ENST00000534320 EGFEM1PQ0D2K5 195 aa12.1□□□□□ -0.47
PHRF1-206ENST00000534320 CXCL6P80162 114 aa12.1□□□□□ -0.47
PHRF1-206ENST00000534320 BCE1O60756 84 aa12.09□□□□□ -0.47
PHRF1-206ENST00000534320 Q6ZVQ6 151 aa12.09□□□□□ -0.47
PHRF1-206ENST00000534320 LYPD5Q6UWN5 251 aa12.08□□□□□ -0.48
PHRF1-206ENST00000534320 PRR3P79522 188 aaKnown RBP12.07□□□□□ -0.48
PHRF1-206ENST00000534320 H0Y9P7 68 aa12.07□□□□□ -0.48
PHRF1-206ENST00000534320 RPL37AP8A6NKH3 93 aa12.07□□□□□ -0.48
PHRF1-206ENST00000534320 LINC00575Q6W349 94 aa12.06□□□□□ -0.48
PHRF1-206ENST00000534320 PLAC8L1A1L4L8 177 aa12.06□□□□□ -0.48
PHRF1-206ENST00000534320 Q9UF83 564 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms