RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 AKAP6Q13023 2319 aa2.62□□□□□ -1.99
ATM-223ENST00000533979 ANK3Q12955 4377 aaKnown RBP2.61□□□□□ -1.99
ATM-223ENST00000533979 PIGBOS1A0A0B4J2F0 54 aa2.61□□□□□ -1.99
ATM-223ENST00000533979 C11orf86A6NJI1 115 aa2.61□□□□□ -1.99
ATM-223ENST00000533979 C3orf84H3BNL1 204 aa2.61□□□□□ -1.99
ATM-223ENST00000533979 J3QLW9 94 aa2.61□□□□□ -1.99
ATM-223ENST00000533979 PLXNB1O43157 2135 aa2.61□□□□□ -1.99
ATM-223ENST00000533979 GNRH2O43555 120 aa2.61□□□□□ -1.99
ATM-223ENST00000533979 IFI6P09912 130 aa2.61□□□□□ -1.99
ATM-223ENST00000533979 PIPP12273 146 aaPredicted RBP2.61□□□□□ -1.99
ATM-223ENST00000533979 ZNF791Q3KP31 576 aaPredicted RBP2.61□□□□□ -1.99
ATM-223ENST00000533979 SLC48A1Q6P1K1 146 aa2.61□□□□□ -1.99
ATM-223ENST00000533979 RPS27LQ71UM5 84 aaKnown RBP2.61□□□□□ -1.99
ATM-223ENST00000533979 NXT2Q9NPJ8 142 aaKnown RBP2.61□□□□□ -1.99
ATM-223ENST00000533979 MED12LQ86YW9 2145 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 PRR14LQ5THK1 2151 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 A6NN06 94 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 SNRPGP15A8MWD9 76 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 E7EQL1 145 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 CCKP06307 115 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 SUPT4H1P63272 117 aaKnown RBP2.6□□□□□ -1.99
ATM-223ENST00000533979 MPV17LQ2QL34 196 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 ASB16-AS1Q495Z4 193 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 PYDC2Q56P42 97 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 CLEC2BQ92478 149 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 AQP3Q92482 292 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 CHCHD1Q96BP2 118 aaKnown RBP2.6□□□□□ -1.99
ATM-223ENST00000533979 TVP23CQ96ET8 276 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 NABP2Q9BQ15 211 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 HIGD2AQ9BW72 106 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 TANC2Q9HCD6 1990 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 KIAA1549Q9HCM3 1950 aa2.6□□□□□ -1.99
ATM-223ENST00000533979 ROS1P08922 2347 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 FREM1Q5H8C1 2179 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 TRAV7A0A075B6U4 112 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 TRAV14DV4A0A0A6YYC5 116 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 IGHV1-24A0A0C4DH33 117 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 IBA57-AS1B1ANH7 110 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 PSCAO43653 123 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 RBM3P98179 157 aaKnown RBP2.59□□□□□ -1.99
ATM-223ENST00000533979 TFF3Q07654 80 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 CFAP126Q5VTH2 177 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 CCL19Q99731 98 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 TTTY12Q9BZ98 90 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 TIMM9Q9Y5J7 89 aa2.59□□□□□ -1.99
ATM-223ENST00000533979 HRNRQ86YZ3 2850 aaPredicted RBP2.59□□□□□ -1.99
ATM-223ENST00000533979 PCLOQ9Y6V0 5065 aa2.58□□□□□ -2
ATM-223ENST00000533979 IGLV3-9A0A075B6K5 115 aa2.58□□□□□ -2
ATM-223ENST00000533979 IGKV2-28A0A075B6P5 120 aa2.58□□□□□ -2
ATM-223ENST00000533979 FXYD6-FXYD2A0A087WZ82 144 aa2.58□□□□□ -2
ATM-223ENST00000533979 IGLV3-32A0A0A0MS00 114 aa2.58□□□□□ -2
ATM-223ENST00000533979 NDUFC1O43677 76 aa2.58□□□□□ -2
ATM-223ENST00000533979 IGKV2D-28P01615 120 aa2.58□□□□□ -2
ATM-223ENST00000533979 ACYP1P07311 99 aa2.58□□□□□ -2
ATM-223ENST00000533979 ASAH2BP0C7U1 165 aa2.58□□□□□ -2
ATM-223ENST00000533979 RNASE2P10153 161 aaKnown RBP2.58□□□□□ -2
ATM-223ENST00000533979 HRES1P13985 223 aa2.58□□□□□ -2
ATM-223ENST00000533979 UBE2G1P62253 170 aa2.58□□□□□ -2
ATM-223ENST00000533979 LYZL1Q6UWQ5 148 aa2.58□□□□□ -2
ATM-223ENST00000533979 LINC01600Q96MT4 127 aa2.58□□□□□ -2
ATM-223ENST00000533979 ODF3Q96PU9 254 aa2.58□□□□□ -2
ATM-223ENST00000533979 FXYD6Q9H0Q3 95 aa2.58□□□□□ -2
ATM-223ENST00000533979 CST11Q9H112 138 aa2.58□□□□□ -2
ATM-223ENST00000533979 ALPK2Q86TB3 2170 aa2.58□□□□□ -2
ATM-223ENST00000533979 CADP27708 2225 aa2.58□□□□□ -2
ATM-223ENST00000533979 TENM3Q9P273 2699 aa2.57□□□□□ -2
ATM-223ENST00000533979 IGLV2-18A0A075B6J9 118 aa2.57□□□□□ -2
ATM-223ENST00000533979 LRCOL1A6NCL2 159 aa2.57□□□□□ -2
ATM-223ENST00000533979 H7C2G1 150 aa2.57□□□□□ -2
ATM-223ENST00000533979 RHOHQ15669 191 aa2.57□□□□□ -2
ATM-223ENST00000533979 Q1T7F1 81 aa2.57□□□□□ -2
ATM-223ENST00000533979 S100A7L2Q5SY68 101 aa2.57□□□□□ -2
ATM-223ENST00000533979 RPL7L1Q6DKI1 246 aaKnown RBP2.57□□□□□ -2
ATM-223ENST00000533979 MRPL35Q9NZE8 188 aaKnown RBP2.57□□□□□ -2
ATM-223ENST00000533979 HIGD1BQ9P298 99 aa2.57□□□□□ -2
ATM-223ENST00000533979 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
ATM-223ENST00000533979 PLCE1Q9P212 2302 aa2.57□□□□□ -2
ATM-223ENST00000533979 A0A0J9YX75 114 aa2.56□□□□□ -2
ATM-223ENST00000533979 CRYM-AS1A6NIL9 109 aa2.56□□□□□ -2
ATM-223ENST00000533979 F2Z2F3 143 aa2.56□□□□□ -2
ATM-223ENST00000533979 COX8AP10176 69 aa2.56□□□□□ -2
ATM-223ENST00000533979 DEFA4P12838 97 aa2.56□□□□□ -2
ATM-223ENST00000533979 FXYD2P54710 66 aa2.56□□□□□ -2
ATM-223ENST00000533979 SMIM11AP58511 58 aa2.56□□□□□ -2
ATM-223ENST00000533979 TMEM170BQ5T4T1 132 aa2.56□□□□□ -2
ATM-223ENST00000533979 SPANXN1Q5VSR9 72 aa2.56□□□□□ -2
ATM-223ENST00000533979 ZCCHC23Q6ZST2 131 aa2.56□□□□□ -2
ATM-223ENST00000533979 MANBALQ9NQG1 85 aa2.56□□□□□ -2
ATM-223ENST00000533979 RYR1P21817 5038 aa2.56□□□□□ -2
ATM-223ENST00000533979 A0A0G2JND7 137 aa2.55□□□□□ -2
ATM-223ENST00000533979 TRBV10-2A0A0K0K1G8 114 aa2.55□□□□□ -2
ATM-223ENST00000533979 HMGN2P05204 90 aaKnown RBP2.55□□□□□ -2
ATM-223ENST00000533979 DSCR4P56555 118 aaPredicted RBP2.55□□□□□ -2
ATM-223ENST00000533979 RPL38P63173 70 aaKnown RBP2.55□□□□□ -2
ATM-223ENST00000533979 NNATQ16517 81 aa2.55□□□□□ -2
ATM-223ENST00000533979 PSMG4Q5JS54 123 aa2.55□□□□□ -2
ATM-223ENST00000533979 FAM27BQ5VT28 67 aa2.55□□□□□ -2
ATM-223ENST00000533979 LINC00643Q86TS7 51 aa2.55□□□□□ -2
ATM-223ENST00000533979 DEFB107AQ8IZN7 70 aa2.55□□□□□ -2
ATM-223ENST00000533979 RETNLBQ9BQ08 111 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms