RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 PLNP26678 52 aa10.55□□□□□ -0.72
PACSIN3-210ENST00000533686 CXCL5P42830 114 aa10.55□□□□□ -0.72
PACSIN3-210ENST00000533686 CKS1BP61024 79 aa10.55□□□□□ -0.72
PACSIN3-210ENST00000533686 C10orf25Q5T742 122 aa10.55□□□□□ -0.72
PACSIN3-210ENST00000533686 TRBV30A0A0K0K1B3 111 aa10.54□□□□□ -0.72
PACSIN3-210ENST00000533686 TMEM223A0PJW6 202 aa10.54□□□□□ -0.72
PACSIN3-210ENST00000533686 XGP55808 180 aa10.54□□□□□ -0.72
PACSIN3-210ENST00000533686 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
PACSIN3-210ENST00000533686 C2orf82Q6UX34 121 aa10.54□□□□□ -0.72
PACSIN3-210ENST00000533686 C6orf48Q9UBA6 75 aa10.54□□□□□ -0.72
PACSIN3-210ENST00000533686 LOC107984640A0A0U1RRK4 108 aa10.53□□□□□ -0.72
PACSIN3-210ENST00000533686 DPM2O94777 84 aa10.53□□□□□ -0.72
PACSIN3-210ENST00000533686 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
PACSIN3-210ENST00000533686 HIST3H2BBQ8N257 126 aa10.53□□□□□ -0.72
PACSIN3-210ENST00000533686 IGKCP01834 107 aa10.52□□□□□ -0.73
PACSIN3-210ENST00000533686 C3orf79P0CE67 100 aa10.52□□□□□ -0.73
PACSIN3-210ENST00000533686 TLX1NBP0CAT3 122 aa10.51□□□□□ -0.73
PACSIN3-210ENST00000533686 S100A2P29034 98 aa10.51□□□□□ -0.73
PACSIN3-210ENST00000533686 LINC01545Q5VT33 79 aa10.51□□□□□ -0.73
PACSIN3-210ENST00000533686 PMCHL2Q9BQD1 86 aa10.51□□□□□ -0.73
PACSIN3-210ENST00000533686 LINC00474Q9P2X8 69 aa10.51□□□□□ -0.73
PACSIN3-210ENST00000533686 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.51□□□□□ -0.73
PACSIN3-210ENST00000533686 HSPG2P98160 4391 aa10.5□□□□□ -0.73
PACSIN3-210ENST00000533686 A0A096LNI7 61 aa10.49□□□□□ -0.73
PACSIN3-210ENST00000533686 C5orf52A6NGY3 159 aa10.49□□□□□ -0.73
PACSIN3-210ENST00000533686 PANO1I0J062 215 aa10.49□□□□□ -0.73
PACSIN3-210ENST00000533686 KRTDAPP60985 99 aa10.49□□□□□ -0.73
PACSIN3-210ENST00000533686 SNRPEP62304 92 aaKnown RBP10.49□□□□□ -0.73
PACSIN3-210ENST00000533686 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
PACSIN3-210ENST00000533686 HIST1H2BLQ99880 126 aa10.49□□□□□ -0.73
PACSIN3-210ENST00000533686 CHTF8P0CG12 524 aa10.48□□□□□ -0.73
PACSIN3-210ENST00000533686 PTTG1IPP53801 180 aa10.48□□□□□ -0.73
PACSIN3-210ENST00000533686 SFTA2Q6UW10 78 aa10.48□□□□□ -0.73
PACSIN3-210ENST00000533686 SCXQ7RTU7 201 aa10.48□□□□□ -0.73
PACSIN3-210ENST00000533686 IGKV2-24A0A0C4DH68 120 aa10.47□□□□□ -0.73
PACSIN3-210ENST00000533686 CIRBP-AS1Q8TBR5 109 aa10.47□□□□□ -0.73
PACSIN3-210ENST00000533686 HERC2O95714 4834 aa10.47□□□□□ -0.73
PACSIN3-210ENST00000533686 NDUFC2-KCTD14E9PQ53 114 aa10.46□□□□□ -0.73
PACSIN3-210ENST00000533686 HERVK_113P61574 105 aa10.46□□□□□ -0.73
PACSIN3-210ENST00000533686 RPL18AQ02543 176 aaKnown RBP10.46□□□□□ -0.73
PACSIN3-210ENST00000533686 GAGE2BQ13066 116 aa10.46□□□□□ -0.73
PACSIN3-210ENST00000533686 C9orf116Q5BN46 136 aaPredicted RBP10.46□□□□□ -0.73
PACSIN3-210ENST00000533686 DPH3Q96FX2 82 aa10.46□□□□□ -0.73
PACSIN3-210ENST00000533686 C20orf202A1L168 122 aa10.45□□□□□ -0.74
PACSIN3-210ENST00000533686 HAMPP81172 84 aa10.45□□□□□ -0.74
PACSIN3-210ENST00000533686 MAJINQ3KP22 176 aa10.45□□□□□ -0.74
PACSIN3-210ENST00000533686 Q6ZRP5 223 aa10.45□□□□□ -0.74
PACSIN3-210ENST00000533686 A0A087WYN8 130 aa10.44□□□□□ -0.74
PACSIN3-210ENST00000533686 LEPROTO15243 131 aa10.44□□□□□ -0.74
PACSIN3-210ENST00000533686 AKR1D1P51857 326 aa10.44□□□□□ -0.74
PACSIN3-210ENST00000533686 PLEKHB2Q96CS7 222 aa10.44□□□□□ -0.74
PACSIN3-210ENST00000533686 ZNF625Q96I27 306 aaPredicted RBP10.44□□□□□ -0.74
PACSIN3-210ENST00000533686 PLAC8Q9NZF1 115 aa10.44□□□□□ -0.74
PACSIN3-210ENST00000533686 STPG4Q8N801 248 aa10.42□□□□□ -0.74
PACSIN3-210ENST00000533686 EPM2AB3EWF7 344 aa10.41□□□□□ -0.74
PACSIN3-210ENST00000533686 E9PLD3 99 aa10.41□□□□□ -0.74
PACSIN3-210ENST00000533686 GAGE2EQ4V326 116 aa10.41□□□□□ -0.74
PACSIN3-210ENST00000533686 GAGE2DQ9UEU5 116 aa10.41□□□□□ -0.74
PACSIN3-210ENST00000533686 J3QQQ9 107 aa10.4□□□□□ -0.74
PACSIN3-210ENST00000533686 HERV-K104P63124 156 aa10.4□□□□□ -0.74
PACSIN3-210ENST00000533686 COX17Q14061 63 aa10.4□□□□□ -0.74
PACSIN3-210ENST00000533686 Q8N1X5 172 aa10.4□□□□□ -0.74
PACSIN3-210ENST00000533686 NDUFA12Q9UI09 145 aa10.4□□□□□ -0.74
PACSIN3-210ENST00000533686 MYMXA0A1B0GTQ4 84 aa10.39□□□□□ -0.75
PACSIN3-210ENST00000533686 TSPEAR-AS2P59090 65 aa10.39□□□□□ -0.75
PACSIN3-210ENST00000533686 ERG28Q9UKR5 140 aa10.39□□□□□ -0.75
PACSIN3-210ENST00000533686 SMR3BP02814 79 aaPredicted RBP10.38□□□□□ -0.75
PACSIN3-210ENST00000533686 NMUP48645 174 aa10.38□□□□□ -0.75
PACSIN3-210ENST00000533686 A0A1W2PNN7 141 aa10.37□□□□□ -0.75
PACSIN3-210ENST00000533686 LGALS3P17931 250 aaKnown RBP10.37□□□□□ -0.75
PACSIN3-210ENST00000533686 C9orf129Q5T035 196 aaKnown RBP10.37□□□□□ -0.75
PACSIN3-210ENST00000533686 FAT1Q14517 4588 aa10.36□□□□□ -0.75
PACSIN3-210ENST00000533686 LINC00587B1AMM8 73 aa10.36□□□□□ -0.75
PACSIN3-210ENST00000533686 PFN2P35080 140 aa10.36□□□□□ -0.75
PACSIN3-210ENST00000533686 KRTAP17-1Q9BYP8 105 aa10.36□□□□□ -0.75
PACSIN3-210ENST00000533686 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
PACSIN3-210ENST00000533686 FAM229AH3BQW9 127 aa10.34□□□□□ -0.75
PACSIN3-210ENST00000533686 XAGE1AQ9HD64 81 aa10.34□□□□□ -0.75
PACSIN3-210ENST00000533686 ATOH7Q8N100 152 aa10.33□□□□□ -0.76
PACSIN3-210ENST00000533686 TMA7Q9Y2S6 64 aaKnown RBP10.33□□□□□ -0.76
PACSIN3-210ENST00000533686 FAM168BA1KXE4 195 aa10.32□□□□□ -0.76
PACSIN3-210ENST00000533686 LINC00158P58513 81 aa10.32□□□□□ -0.76
PACSIN3-210ENST00000533686 MEIG1Q5JSS6 88 aa10.32□□□□□ -0.76
PACSIN3-210ENST00000533686 VPS13BQ7Z7G8 4022 aa10.31□□□□□ -0.76
PACSIN3-210ENST00000533686 IGKV2D-26A0A0A0MRZ7 120 aa10.31□□□□□ -0.76
PACSIN3-210ENST00000533686 SMIM13P0DJ93 91 aa10.31□□□□□ -0.76
PACSIN3-210ENST00000533686 Q5VSD8 79 aa10.31□□□□□ -0.76
PACSIN3-210ENST00000533686 KRTAP7-1Q8IUC3 87 aa10.31□□□□□ -0.76
PACSIN3-210ENST00000533686 C7orf33Q8WU49 177 aa10.31□□□□□ -0.76
PACSIN3-210ENST00000533686 PLA2G2DQ9UNK4 145 aa10.31□□□□□ -0.76
PACSIN3-210ENST00000533686 SCGB1D1O95968 90 aa10.3□□□□□ -0.76
PACSIN3-210ENST00000533686 ANKRD39Q53RE8 183 aa10.3□□□□□ -0.76
PACSIN3-210ENST00000533686 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
PACSIN3-210ENST00000533686 SND1-IT1Q9HBX3 110 aa10.3□□□□□ -0.76
PACSIN3-210ENST00000533686 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
PACSIN3-210ENST00000533686 A0A0J9YXY3 114 aa10.28□□□□□ -0.76
PACSIN3-210ENST00000533686 A0A0U1RRA0 63 aa10.28□□□□□ -0.76
PACSIN3-210ENST00000533686 SERTAD4-AS1Q5TG53 156 aa10.28□□□□□ -0.76
PACSIN3-210ENST00000533686 ZNF815PA8K554 130 aa10.27□□□□□ -0.77
PACSIN3-210ENST00000533686 HSBP1L1C9JCN9 74 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 783.3 ms