RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, human

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1-208	ENST00000533361	BAGE3	Q86Y29	109 aa		14.04	□□□□□ -0.16
SIPA1-208	ENST00000533361	CHCHD1	Q96BP2	118 aa	Known RBP	14.04	□□□□□ -0.16
SIPA1-208	ENST00000533361	KRTAP10-4	P60372	401 aa	Predicted RBP	14.03	□□□□□ -0.16
SIPA1-208	ENST00000533361		Q8IZM0	81 aa		14.03	□□□□□ -0.16
SIPA1-208	ENST00000533361	TRBV30	A0A0K0K1B3	111 aa		14.02	□□□□□ -0.17
SIPA1-208	ENST00000533361	COLCA2	A8K830	154 aa		14	□□□□□ -0.17
SIPA1-208	ENST00000533361	GAGE2E	Q4V326	116 aa		14	□□□□□ -0.17
SIPA1-208	ENST00000533361	GAGE2D	Q9UEU5	116 aa		14	□□□□□ -0.17
SIPA1-208	ENST00000533361	IGLV5-45	A0A087WSX0	123 aa		13.99	□□□□□ -0.17
SIPA1-208	ENST00000533361	SMIM1	B2RUZ4	78 aa		13.99	□□□□□ -0.17
SIPA1-208	ENST00000533361		H3BRM9	83 aa		13.99	□□□□□ -0.17
SIPA1-208	ENST00000533361	HSBP1	O75506	76 aa		13.99	□□□□□ -0.17
SIPA1-208	ENST00000533361	SPINK8	P0C7L1	97 aa		13.99	□□□□□ -0.17
SIPA1-208	ENST00000533361	FLG2	Q5D862	2391 aa	Predicted RBP	13.98	□□□□□ -0.17
SIPA1-208	ENST00000533361		A0A1W2PNN7	141 aa		13.98	□□□□□ -0.17
SIPA1-208	ENST00000533361	TLX1NB	P0CAT3	122 aa		13.98	□□□□□ -0.17
SIPA1-208	ENST00000533361	C9orf116	Q5BN46	136 aa	Predicted RBP	13.98	□□□□□ -0.17
SIPA1-208	ENST00000533361		Q6ZRP5	223 aa		13.98	□□□□□ -0.17
SIPA1-208	ENST00000533361	COX7B2	Q8TF08	81 aa		13.98	□□□□□ -0.17
SIPA1-208	ENST00000533361	MYCBP2	O75592	4640 aa		13.98	□□□□□ -0.17
SIPA1-208	ENST00000533361	IGLC3	P0DOY3	106 aa		13.97	□□□□□ -0.17
SIPA1-208	ENST00000533361	SCO1	O75880	301 aa		13.96	□□□□□ -0.17
SIPA1-208	ENST00000533361	CXCL5	P42830	114 aa		13.95	□□□□□ -0.18
SIPA1-208	ENST00000533361	FAM19A2	Q8N3H0	131 aa		13.95	□□□□□ -0.18
SIPA1-208	ENST00000533361	NDUFC2-KCTD14	E9PQ53	114 aa		13.94	□□□□□ -0.18
SIPA1-208	ENST00000533361		F8VRH5	84 aa		13.94	□□□□□ -0.18
SIPA1-208	ENST00000533361	IFI27L1	Q96BM0	104 aa		13.94	□□□□□ -0.18
SIPA1-208	ENST00000533361	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.93	□□□□□ -0.18
SIPA1-208	ENST00000533361	ZNF22	P17026	224 aa	Predicted RBP	13.92	□□□□□ -0.18
SIPA1-208	ENST00000533361	HNRNPA3	P51991	378 aa	Known RBP	13.92	□□□□□ -0.18
SIPA1-208	ENST00000533361	SERF1A	O75920	110 aa		13.91	□□□□□ -0.18
SIPA1-208	ENST00000533361	TMEM170B	Q5T4T1	132 aa		13.91	□□□□□ -0.18
SIPA1-208	ENST00000533361	FAM168B	A1KXE4	195 aa		13.9	□□□□□ -0.18
SIPA1-208	ENST00000533361	C11orf86	A6NJI1	115 aa		13.9	□□□□□ -0.18
SIPA1-208	ENST00000533361		J3QL48	77 aa		13.9	□□□□□ -0.18
SIPA1-208	ENST00000533361	PHF5A	Q7RTV0	110 aa	Known RBP	13.9	□□□□□ -0.18
SIPA1-208	ENST00000533361	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.9	□□□□□ -0.18
SIPA1-208	ENST00000533361	PRR3	P79522	188 aa	Known RBP	13.89	□□□□□ -0.19
SIPA1-208	ENST00000533361	TRAV12-1	A0A0B4J245	112 aa		13.87	□□□□□ -0.19
SIPA1-208	ENST00000533361		H0Y8G0	127 aa		13.86	□□□□□ -0.19
SIPA1-208	ENST00000533361	LEPROTL1	O95214	131 aa		13.86	□□□□□ -0.19
SIPA1-208	ENST00000533361	C9orf129	Q5T035	196 aa	Known RBP	13.86	□□□□□ -0.19
SIPA1-208	ENST00000533361	IGLV5-39	A0A0G2JS06	123 aa		13.85	□□□□□ -0.19
SIPA1-208	ENST00000533361	LINC00310	P59036	64 aa		13.85	□□□□□ -0.19
SIPA1-208	ENST00000533361	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.84	□□□□□ -0.19
SIPA1-208	ENST00000533361	NUPR1	O60356	82 aa		13.84	□□□□□ -0.19
SIPA1-208	ENST00000533361	XAGE1A	Q9HD64	81 aa		13.84	□□□□□ -0.19
SIPA1-208	ENST00000533361	FABP4	P15090	132 aa		13.83	□□□□□ -0.2
SIPA1-208	ENST00000533361	HSPB8	Q9UJY1	196 aa		13.82	□□□□□ -0.2
SIPA1-208	ENST00000533361		M0QXV9	152 aa		13.81	□□□□□ -0.2
SIPA1-208	ENST00000533361	OXT	P01178	125 aa		13.81	□□□□□ -0.2
SIPA1-208	ENST00000533361	PSORS1C2	Q9UIG4	136 aa		13.8	□□□□□ -0.2
SIPA1-208	ENST00000533361	UBE2B	P63146	152 aa		13.79	□□□□□ -0.2
SIPA1-208	ENST00000533361	KRTAP7-1	Q8IUC3	87 aa		13.79	□□□□□ -0.2
SIPA1-208	ENST00000533361	TMEM223	A0PJW6	202 aa		13.78	□□□□□ -0.2
SIPA1-208	ENST00000533361	PFN2	P35080	140 aa		13.78	□□□□□ -0.2
SIPA1-208	ENST00000533361	C1orf137	Q5JT78	98 aa		13.78	□□□□□ -0.2
SIPA1-208	ENST00000533361	HIST1H2BK	O60814	126 aa		13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	HIST1H2BJ	P06899	126 aa		13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	HIST1H2BO	P23527	126 aa		13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	HIST1H2BB	P33778	126 aa		13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	HIST1H2BD	P58876	126 aa		13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	HIST1H2BC	P62807	126 aa		13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	HIST2H2BE	Q16778	126 aa		13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	HIST1H2BH	Q93079	126 aa		13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	ZNF625	Q96I27	306 aa	Predicted RBP	13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	HIST1H2BN	Q99877	126 aa		13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	HIST1H2BM	Q99879	126 aa		13.77	□□□□□ -0.21
SIPA1-208	ENST00000533361	ODF1	Q14990	250 aa		13.76	□□□□□ -0.21
SIPA1-208	ENST00000533361	SERTAD4-AS1	Q5TG53	156 aa		13.76	□□□□□ -0.21
SIPA1-208	ENST00000533361	PKHD1L1	Q86WI1	4243 aa		13.74	□□□□□ -0.21
SIPA1-208	ENST00000533361	SFTA2	Q6UW10	78 aa		13.74	□□□□□ -0.21
SIPA1-208	ENST00000533361	SPINK6	Q6UWN8	80 aa		13.74	□□□□□ -0.21
SIPA1-208	ENST00000533361	ERG28	Q9UKR5	140 aa		13.74	□□□□□ -0.21
SIPA1-208	ENST00000533361	C22orf24	Q9Y442	160 aa		13.74	□□□□□ -0.21
SIPA1-208	ENST00000533361	LBH	Q53QV2	105 aa	Predicted RBP	13.72	□□□□□ -0.21
SIPA1-208	ENST00000533361	KRTAP11-1	Q8IUC1	163 aa		13.72	□□□□□ -0.21
SIPA1-208	ENST00000533361	MAP1LC3C	Q9BXW4	147 aa		13.72	□□□□□ -0.21
SIPA1-208	ENST00000533361	PLN	P26678	52 aa		13.7	□□□□□ -0.22
SIPA1-208	ENST00000533361	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
SIPA1-208	ENST00000533361	PMCHL2	Q9BQD1	86 aa		13.7	□□□□□ -0.22
SIPA1-208	ENST00000533361	DPM2	O94777	84 aa		13.69	□□□□□ -0.22
SIPA1-208	ENST00000533361	COX17	Q14061	63 aa		13.69	□□□□□ -0.22
SIPA1-208	ENST00000533361	S100A1	P23297	94 aa		13.68	□□□□□ -0.22
SIPA1-208	ENST00000533361	LINC00158	P58513	81 aa		13.68	□□□□□ -0.22
SIPA1-208	ENST00000533361	IGLV7-43	P04211	117 aa		13.67	□□□□□ -0.22
SIPA1-208	ENST00000533361	REG3G	Q6UW15	175 aa		13.67	□□□□□ -0.22
SIPA1-208	ENST00000533361	MRPL55	Q7Z7F7	128 aa	Known RBP	13.67	□□□□□ -0.22
SIPA1-208	ENST00000533361	NKAPP1	Q8N9T2	125 aa		13.67	□□□□□ -0.22
SIPA1-208	ENST00000533361	TP73-AS1	Q9UF72	201 aa		13.67	□□□□□ -0.22
SIPA1-208	ENST00000533361	PLA2G2D	Q9UNK4	145 aa		13.67	□□□□□ -0.22
SIPA1-208	ENST00000533361		A0A0U1RRA0	63 aa		13.66	□□□□□ -0.22
SIPA1-208	ENST00000533361	IGKC	P01834	107 aa		13.66	□□□□□ -0.22
SIPA1-208	ENST00000533361	SND1-IT1	Q9HBX3	110 aa		13.66	□□□□□ -0.22
SIPA1-208	ENST00000533361	ATP6V1G1	O75348	118 aa		13.65	□□□□□ -0.22
SIPA1-208	ENST00000533361	HERVK_113	P61574	105 aa		13.65	□□□□□ -0.22
SIPA1-208	ENST00000533361	LRP1	Q07954	4544 aa	Known RBP	13.65	□□□□□ -0.22
SIPA1-208	ENST00000533361	GAGE10	A6NGK3	116 aa		13.64	□□□□□ -0.23
SIPA1-208	ENST00000533361	MEIG1	Q5JSS6	88 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms