RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 LYPD5Q6UWN5 251 aa12.61□□□□□ -0.39
PAX6-228ENST00000533333 DOPEY1Q5JWR5 2465 aa12.6□□□□□ -0.39
PAX6-228ENST00000533333 PTPN13Q12923 2485 aa12.6□□□□□ -0.39
PAX6-228ENST00000533333 CUL9Q8IWT3 2517 aa12.6□□□□□ -0.39
PAX6-228ENST00000533333 TTC28Q96AY4 2481 aa12.6□□□□□ -0.39
PAX6-228ENST00000533333 TMEM254Q8TBM7 123 aa12.6□□□□□ -0.39
PAX6-228ENST00000533333 AVPP01185 164 aa12.59□□□□□ -0.39
PAX6-228ENST00000533333 DSCAMO60469 2012 aa12.58□□□□□ -0.4
PAX6-228ENST00000533333 PRR14LQ5THK1 2151 aa12.58□□□□□ -0.4
PAX6-228ENST00000533333 Q6ZRU5 148 aa12.58□□□□□ -0.4
PAX6-228ENST00000533333 OTOGLQ3ZCN5 2332 aa12.58□□□□□ -0.4
PAX6-228ENST00000533333 A8MTW9 85 aa12.58□□□□□ -0.4
PAX6-228ENST00000533333 SPINT4Q6UDR6 99 aa12.57□□□□□ -0.4
PAX6-228ENST00000533333 C22orf24Q9Y442 160 aa12.57□□□□□ -0.4
PAX6-228ENST00000533333 NHLRC4P0CG21 123 aaPredicted RBP12.57□□□□□ -0.4
PAX6-228ENST00000533333 DENND4CQ5VZ89 1909 aa12.57□□□□□ -0.4
PAX6-228ENST00000533333 FAM229AH3BQW9 127 aa12.56□□□□□ -0.4
PAX6-228ENST00000533333 ACYP2P14621 99 aa12.56□□□□□ -0.4
PAX6-228ENST00000533333 KIF26AQ9ULI4 1882 aaPredicted RBP12.56□□□□□ -0.4
PAX6-228ENST00000533333 PLXNB3Q9ULL4 1909 aa12.56□□□□□ -0.4
PAX6-228ENST00000533333 MOBPQ13875 183 aa12.55□□□□□ -0.4
PAX6-228ENST00000533333 FREM1Q5H8C1 2179 aa12.55□□□□□ -0.4
PAX6-228ENST00000533333 ADAMTSL4-AS1Q5T5F5 129 aa12.54□□□□□ -0.4
PAX6-228ENST00000533333 KRTAP10-9P60411 292 aa12.54□□□□□ -0.4
PAX6-228ENST00000533333 NOTCH4Q99466 2003 aa12.54□□□□□ -0.4
PAX6-228ENST00000533333 TSPEAR-AS2P59090 65 aa12.52□□□□□ -0.4
PAX6-228ENST00000533333 ZNF106Q9H2Y7 1883 aaKnown RBP12.52□□□□□ -0.41
PAX6-228ENST00000533333 SMIM29Q86T20 159 aa12.52□□□□□ -0.41
PAX6-228ENST00000533333 MDFIQ99750 246 aa12.51□□□□□ -0.41
PAX6-228ENST00000533333 KIAA1549Q9HCM3 1950 aa12.51□□□□□ -0.41
PAX6-228ENST00000533333 TANC2Q9HCD6 1990 aa12.51□□□□□ -0.41
PAX6-228ENST00000533333 C16orf95Q9H693 158 aa12.5□□□□□ -0.41
PAX6-228ENST00000533333 C6orf48Q9UBA6 75 aa12.5□□□□□ -0.41
PAX6-228ENST00000533333 CNFNQ9BYD5 112 aa12.49□□□□□ -0.41
PAX6-228ENST00000533333 KIAA0087Q14695 138 aa12.49□□□□□ -0.41
PAX6-228ENST00000533333 ZNF580Q9UK33 172 aa12.49□□□□□ -0.41
PAX6-228ENST00000533333 A0A1B0GUV1 79 aa12.48□□□□□ -0.41
PAX6-228ENST00000533333 IGLV8-61A0A075B6I0 122 aa12.48□□□□□ -0.41
PAX6-228ENST00000533333 CRIP3Q6Q6R5 217 aa12.48□□□□□ -0.41
PAX6-228ENST00000533333 TP53AIP1Q9HCN2 124 aa12.47□□□□□ -0.41
PAX6-228ENST00000533333 Q6ZSN1 163 aa12.46□□□□□ -0.41
PAX6-228ENST00000533333 FHL3Q13643 280 aa12.46□□□□□ -0.41
PAX6-228ENST00000533333 AMELXQ99217 191 aa12.46□□□□□ -0.41
PAX6-228ENST00000533333 J3QL48 77 aa12.45□□□□□ -0.42
PAX6-228ENST00000533333 ANKHD1Q8IWZ3 2542 aaKnown RBP12.45□□□□□ -0.42
PAX6-228ENST00000533333 CDSNQ15517 529 aa12.45□□□□□ -0.42
PAX6-228ENST00000533333 LINC00846Q9NV44 126 aa12.45□□□□□ -0.42
PAX6-228ENST00000533333 ATP11AUNQ6ZP68 121 aa12.45□□□□□ -0.42
PAX6-228ENST00000533333 CXCL6P80162 114 aa12.44□□□□□ -0.42
PAX6-228ENST00000533333 TYMSOSQ8TAI1 123 aa12.43□□□□□ -0.42
PAX6-228ENST00000533333 LINC01561Q8N1V8 128 aa12.43□□□□□ -0.42
PAX6-228ENST00000533333 LINC00313P59037 77 aa12.42□□□□□ -0.42
PAX6-228ENST00000533333 MUC4Q99102 2169 aa12.42□□□□□ -0.42
PAX6-228ENST00000533333 COX6B2Q6YFQ2 88 aa12.42□□□□□ -0.42
PAX6-228ENST00000533333 C2orf16Q68DN1 1984 aa12.42□□□□□ -0.42
PAX6-228ENST00000533333 YPEL4Q96NS1 127 aa12.41□□□□□ -0.42
PAX6-228ENST00000533333 CCDC168Q8NDH2 2452 aa12.41□□□□□ -0.42
PAX6-228ENST00000533333 ALPK3Q96L96 1907 aa12.4□□□□□ -0.42
PAX6-228ENST00000533333 HIVEP3Q5T1R4 2406 aa12.38□□□□□ -0.43
PAX6-228ENST00000533333 C16orf90A8MZG2 172 aa12.38□□□□□ -0.43
PAX6-228ENST00000533333 LINC00167Q96N53 147 aa12.38□□□□□ -0.43
PAX6-228ENST00000533333 Q96NJ1 140 aa12.37□□□□□ -0.43
PAX6-228ENST00000533333 ARHGAP32A7KAX9 2087 aa12.37□□□□□ -0.43
PAX6-228ENST00000533333 SPATA3Q8NHX4 192 aa12.36□□□□□ -0.43
PAX6-228ENST00000533333 SSBP3-AS1Q7Z2R9 100 aa12.36□□□□□ -0.43
PAX6-228ENST00000533333 CHTF8P0CG12 524 aa12.35□□□□□ -0.43
PAX6-228ENST00000533333 PLXNB1O43157 2135 aa12.35□□□□□ -0.43
PAX6-228ENST00000533333 C8orf87E5RJ46 101 aa12.35□□□□□ -0.43
PAX6-228ENST00000533333 COL4A4P53420 1690 aaPredicted RBP12.33□□□□□ -0.44
PAX6-228ENST00000533333 PHF5AQ7RTV0 110 aaKnown RBP12.33□□□□□ -0.44
PAX6-228ENST00000533333 COL4A3Q01955 1670 aa12.33□□□□□ -0.44
PAX6-228ENST00000533333 TECTAO75443 2155 aa12.33□□□□□ -0.44
PAX6-228ENST00000533333 RTL8CO15255 209 aa12.32□□□□□ -0.44
PAX6-228ENST00000533333 Q8NBF4 154 aa12.32□□□□□ -0.44
PAX6-228ENST00000533333 KIF25-AS1Q9Y6Z4 181 aa12.32□□□□□ -0.44
PAX6-228ENST00000533333 URB1-AS1Q96HZ7 61 aa12.32□□□□□ -0.44
PAX6-228ENST00000533333 Q6ZRP5 223 aa12.31□□□□□ -0.44
PAX6-228ENST00000533333 NAV2Q8IVL1 2488 aa12.3□□□□□ -0.44
PAX6-228ENST00000533333 ABCA2Q9BZC7 2435 aa12.3□□□□□ -0.44
PAX6-228ENST00000533333 VPREB1P12018 145 aa12.29□□□□□ -0.44
PAX6-228ENST00000533333 APLNQ9ULZ1 77 aa12.29□□□□□ -0.44
PAX6-228ENST00000533333 EXPH5Q8NEV8 1989 aa12.29□□□□□ -0.44
PAX6-228ENST00000533333 TRAV22A0A0B4J277 110 aa12.26□□□□□ -0.45
PAX6-228ENST00000533333 PRO0628Q9UI54 55 aa12.26□□□□□ -0.45
PAX6-228ENST00000533333 LINC00476Q8WZB0 136 aa12.25□□□□□ -0.45
PAX6-228ENST00000533333 LINC00315P59091 139 aa12.24□□□□□ -0.45
PAX6-228ENST00000533333 NUP210LQ5VU65 1888 aa12.24□□□□□ -0.45
PAX6-228ENST00000533333 NAV3Q8IVL0 2385 aa12.24□□□□□ -0.45
PAX6-228ENST00000533333 HCFC1P51610 2035 aa12.24□□□□□ -0.45
PAX6-228ENST00000533333 EPM2AB3EWF7 344 aa12.24□□□□□ -0.45
PAX6-228ENST00000533333 RPL37AP61513 92 aaKnown RBP12.24□□□□□ -0.45
PAX6-228ENST00000533333 H3BPC8 53 aa12.22□□□□□ -0.45
PAX6-228ENST00000533333 CRIPTQ9P021 101 aa12.22□□□□□ -0.45
PAX6-228ENST00000533333 C11orf72Q8NBR9 251 aa12.21□□□□□ -0.45
PAX6-228ENST00000533333 LINC00310P59036 64 aa12.2□□□□□ -0.46
PAX6-228ENST00000533333 LINC01600Q96MT4 127 aa12.19□□□□□ -0.46
PAX6-228ENST00000533333 NBDYA0A0U1RRE5 68 aa12.18□□□□□ -0.46
PAX6-228ENST00000533333 ELOF1P60002 83 aaKnown RBP12.18□□□□□ -0.46
PAX6-228ENST00000533333 C2CD3Q4AC94 2353 aa12.18□□□□□ -0.46
PAX6-228ENST00000533333 ATG2AQ2TAZ0 1938 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms