RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 CIRBPQ14011 172 aaKnown RBP15.83■□□□□ 0.12
USP48-214ENST00000532737 SMR3BP02814 79 aaPredicted RBP15.82■□□□□ 0.12
USP48-214ENST00000532737 RNF151Q2KHN1 245 aa15.82■□□□□ 0.12
USP48-214ENST00000532737 Q8IZM0 81 aa15.82■□□□□ 0.12
USP48-214ENST00000532737 HSPB8Q9UJY1 196 aa15.82■□□□□ 0.12
USP48-214ENST00000532737 A0A096LNI7 61 aa15.81■□□□□ 0.12
USP48-214ENST00000532737 H3BRM9 83 aa15.81■□□□□ 0.12
USP48-214ENST00000532737 C6orf226Q5I0X4 101 aa15.81■□□□□ 0.12
USP48-214ENST00000532737 COA6Q5JTJ3 125 aaKnown RBP15.81■□□□□ 0.12
USP48-214ENST00000532737 C6orf48Q9UBA6 75 aa15.81■□□□□ 0.12
USP48-214ENST00000532737 IGKV2-24A0A0C4DH68 120 aa15.8■□□□□ 0.12
USP48-214ENST00000532737 SPACA4Q8TDM5 124 aa15.8■□□□□ 0.12
USP48-214ENST00000532737 H0Y8G0 127 aa15.79■□□□□ 0.12
USP48-214ENST00000532737 FAT1Q14517 4588 aa15.78■□□□□ 0.12
USP48-214ENST00000532737 LOC107984640A0A0U1RRK4 108 aa15.78■□□□□ 0.12
USP48-214ENST00000532737 F8VRH5 84 aa15.78■□□□□ 0.12
USP48-214ENST00000532737 CKS1BP61024 79 aa15.78■□□□□ 0.12
USP48-214ENST00000532737 COX7B2Q8TF08 81 aa15.78■□□□□ 0.12
USP48-214ENST00000532737 DPH3Q96FX2 82 aa15.78■□□□□ 0.12
USP48-214ENST00000532737 PKIGQ9Y2B9 76 aa15.78■□□□□ 0.12
USP48-214ENST00000532737 ODF1Q14990 250 aa15.77■□□□□ 0.12
USP48-214ENST00000532737 TMEM170BQ5T4T1 132 aa15.77■□□□□ 0.12
USP48-214ENST00000532737 MAJINQ3KP22 176 aa15.76■□□□□ 0.11
USP48-214ENST00000532737 A0A087WYN8 130 aa15.75■□□□□ 0.11
USP48-214ENST00000532737 IGLV5-39A0A0G2JS06 123 aa15.75■□□□□ 0.11
USP48-214ENST00000532737 GAGE2BQ13066 116 aa15.75■□□□□ 0.11
USP48-214ENST00000532737 TRBV30A0A0K0K1B3 111 aa15.74■□□□□ 0.11
USP48-214ENST00000532737 PTTG1IPP53801 180 aa15.74■□□□□ 0.11
USP48-214ENST00000532737 RPL18AQ02543 176 aaKnown RBP15.72■□□□□ 0.11
USP48-214ENST00000532737 C9orf116Q5BN46 136 aaPredicted RBP15.72■□□□□ 0.11
USP48-214ENST00000532737 MAP1LC3CQ9BXW4 147 aa15.72■□□□□ 0.11
USP48-214ENST00000532737 TLX1NBP0CAT3 122 aa15.71■□□□□ 0.11
USP48-214ENST00000532737 CXCL5P42830 114 aa15.71■□□□□ 0.11
USP48-214ENST00000532737 PLAC8Q9NZF1 115 aa15.71■□□□□ 0.11
USP48-214ENST00000532737 LINC00474Q9P2X8 69 aa15.71■□□□□ 0.11
USP48-214ENST00000532737 TMEM223A0PJW6 202 aa15.7■□□□□ 0.1
USP48-214ENST00000532737 Q6ZRP5 223 aa15.7■□□□□ 0.1
USP48-214ENST00000532737 PMCHL2Q9BQD1 86 aa15.7■□□□□ 0.1
USP48-214ENST00000532737 STPG4Q8N801 248 aa15.69■□□□□ 0.1
USP48-214ENST00000532737 HERC1Q15751 4861 aa15.68■□□□□ 0.1
USP48-214ENST00000532737 LINC00528Q8N1L1 170 aa15.68■□□□□ 0.1
USP48-214ENST00000532737 EPM2AB3EWF7 344 aa15.67■□□□□ 0.1
USP48-214ENST00000532737 Q5VSD8 79 aa15.67■□□□□ 0.1
USP48-214ENST00000532737 NDUFC2-KCTD14E9PQ53 114 aa15.66■□□□□ 0.1
USP48-214ENST00000532737 FAM229AH3BQW9 127 aa15.66■□□□□ 0.1
USP48-214ENST00000532737 SYS1-DBNDD2H3BUS1 97 aa15.66■□□□□ 0.1
USP48-214ENST00000532737 DMBT1Q9UGM3 2413 aaPredicted RBP15.66■□□□□ 0.1
USP48-214ENST00000532737 DPM2O94777 84 aa15.65■□□□□ 0.1
USP48-214ENST00000532737 PLNP26678 52 aa15.65■□□□□ 0.1
USP48-214ENST00000532737 GAGE2EQ4V326 116 aa15.65■□□□□ 0.1
USP48-214ENST00000532737 GAGE2DQ9UEU5 116 aa15.65■□□□□ 0.1
USP48-214ENST00000532737 A0A1W2PNN7 141 aa15.63■□□□□ 0.09
USP48-214ENST00000532737 IGKCP01834 107 aa15.61■□□□□ 0.09
USP48-214ENST00000532737 C3orf79P0CE67 100 aa15.61■□□□□ 0.09
USP48-214ENST00000532737 PET117Q6UWS5 81 aa15.6■□□□□ 0.09
USP48-214ENST00000532737 VPS13BQ7Z7G8 4022 aa15.6■□□□□ 0.09
USP48-214ENST00000532737 INAFM2P0DMQ5 153 aa15.58■□□□□ 0.08
USP48-214ENST00000532737 C9orf129Q5T035 196 aaKnown RBP15.58■□□□□ 0.08
USP48-214ENST00000532737 LINC01545Q5VT33 79 aa15.58■□□□□ 0.08
USP48-214ENST00000532737 HIST3H2BBQ8N257 126 aa15.58■□□□□ 0.08
USP48-214ENST00000532737 ZNF625Q96I27 306 aaPredicted RBP15.58■□□□□ 0.08
USP48-214ENST00000532737 KRTDAPP60985 99 aa15.57■□□□□ 0.08
USP48-214ENST00000532737 FAM168BA1KXE4 195 aa15.56■□□□□ 0.08
USP48-214ENST00000532737 FLG2Q5D862 2391 aaPredicted RBP15.56■□□□□ 0.08
USP48-214ENST00000532737 PLA2G1BP04054 148 aaKnown RBP15.55■□□□□ 0.08
USP48-214ENST00000532737 XAGE1AQ9HD64 81 aa15.55■□□□□ 0.08
USP48-214ENST00000532737 SRRM2Q9UQ35 2752 aaKnown RBP15.54■□□□□ 0.08
USP48-214ENST00000532737 S100A6P06703 90 aa15.54■□□□□ 0.08
USP48-214ENST00000532737 KRTAP10-4P60372 401 aaPredicted RBP15.54■□□□□ 0.08
USP48-214ENST00000532737 KRTAP7-1Q8IUC3 87 aa15.54■□□□□ 0.08
USP48-214ENST00000532737 SFTA2Q6UW10 78 aa15.53■□□□□ 0.08
USP48-214ENST00000532737 ERG28Q9UKR5 140 aa15.53■□□□□ 0.08
USP48-214ENST00000532737 LEPROTO15243 131 aa15.52■□□□□ 0.08
USP48-214ENST00000532737 PFN2P35080 140 aa15.52■□□□□ 0.08
USP48-214ENST00000532737 TSPEAR-AS2P59090 65 aa15.52■□□□□ 0.08
USP48-214ENST00000532737 RPL37AP61513 92 aaKnown RBP15.52■□□□□ 0.08
USP48-214ENST00000532737 HERVK_113P61574 105 aa15.52■□□□□ 0.08
USP48-214ENST00000532737 HIST1H2BLQ99880 126 aa15.52■□□□□ 0.08
USP48-214ENST00000532737 FAM19A5Q7Z5A7 132 aaPredicted RBP15.51■□□□□ 0.07
USP48-214ENST00000532737 C7orf33Q8WU49 177 aa15.51■□□□□ 0.07
USP48-214ENST00000532737 PLEKHB2Q96CS7 222 aa15.51■□□□□ 0.07
USP48-214ENST00000532737 MYCBP2O75592 4640 aa15.51■□□□□ 0.07
USP48-214ENST00000532737 S100A2P29034 98 aa15.5■□□□□ 0.07
USP48-214ENST00000532737 SNRPEP62304 92 aaKnown RBP15.49■□□□□ 0.07
USP48-214ENST00000532737 PHF5AQ7RTV0 110 aaKnown RBP15.49■□□□□ 0.07
USP48-214ENST00000532737 NDUFA12Q9UI09 145 aa15.49■□□□□ 0.07
USP48-214ENST00000532737 J3QQQ9 107 aa15.47■□□□□ 0.07
USP48-214ENST00000532737 COX17Q14061 63 aa15.47■□□□□ 0.07
USP48-214ENST00000532737 SERTAD4-AS1Q5TG53 156 aa15.47■□□□□ 0.07
USP48-214ENST00000532737 E9PLD3 99 aa15.45■□□□□ 0.06
USP48-214ENST00000532737 HERV-K104P63124 156 aa15.45■□□□□ 0.06
USP48-214ENST00000532737 MYMXA0A1B0GTQ4 84 aa15.44■□□□□ 0.06
USP48-214ENST00000532737 C20orf202A1L168 122 aa15.44■□□□□ 0.06
USP48-214ENST00000532737 C5orf52A6NGY3 159 aa15.44■□□□□ 0.06
USP48-214ENST00000532737 A0A0U1RRA0 63 aa15.43■□□□□ 0.06
USP48-214ENST00000532737 LGALS3P17931 250 aaKnown RBP15.43■□□□□ 0.06
USP48-214ENST00000532737 LINC00158P58513 81 aa15.43■□□□□ 0.06
USP48-214ENST00000532737 SND1-IT1Q9HBX3 110 aa15.43■□□□□ 0.06
USP48-214ENST00000532737 M0QXV9 152 aa15.42■□□□□ 0.06
USP48-214ENST00000532737 SMIM13P0DJ93 91 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms