RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	C3orf79	P0CE67	100 aa		13.74	□□□□□ -0.21
PABPC4-225	ENST00000531243	AKR1D1	P51857	326 aa		13.74	□□□□□ -0.21
PABPC4-225	ENST00000531243	HERVK_113	P61574	105 aa		13.74	□□□□□ -0.21
PABPC4-225	ENST00000531243	IGLV5-39	A0A0G2JS06	123 aa		13.73	□□□□□ -0.21
PABPC4-225	ENST00000531243	SFTA2	Q6UW10	78 aa		13.73	□□□□□ -0.21
PABPC4-225	ENST00000531243	SDIM1	Q6ZPB5	146 aa		13.73	□□□□□ -0.21
PABPC4-225	ENST00000531243	LOC107984640	A0A0U1RRK4	108 aa		13.72	□□□□□ -0.21
PABPC4-225	ENST00000531243	LINC01545	Q5VT33	79 aa		13.72	□□□□□ -0.21
PABPC4-225	ENST00000531243	UNQ6190/PRO20217	Q6UXQ8	127 aa		13.72	□□□□□ -0.21
PABPC4-225	ENST00000531243	PMCHL2	Q9BQD1	86 aa		13.72	□□□□□ -0.21
PABPC4-225	ENST00000531243	EPPK1	P58107	5090 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-225	ENST00000531243	DNAH11	Q96DT5	4516 aa		13.71	□□□□□ -0.21
PABPC4-225	ENST00000531243	C5orf52	A6NGY3	159 aa		13.71	□□□□□ -0.21
PABPC4-225	ENST00000531243	C2orf82	Q6UX34	121 aa		13.71	□□□□□ -0.21
PABPC4-225	ENST00000531243	HIST1H2BL	Q99880	126 aa		13.71	□□□□□ -0.21
PABPC4-225	ENST00000531243	CDK2AP2	O75956	126 aa		13.7	□□□□□ -0.22
PABPC4-225	ENST00000531243	LINC00474	Q9P2X8	69 aa		13.7	□□□□□ -0.22
PABPC4-225	ENST00000531243	C6orf48	Q9UBA6	75 aa		13.69	□□□□□ -0.22
PABPC4-225	ENST00000531243	C10orf25	Q5T742	122 aa		13.68	□□□□□ -0.22
PABPC4-225	ENST00000531243	DPH3	Q96FX2	82 aa		13.68	□□□□□ -0.22
PABPC4-225	ENST00000531243	RPL18A	Q02543	176 aa	Known RBP	13.67	□□□□□ -0.22
PABPC4-225	ENST00000531243		Q6ZSA8	131 aa		13.67	□□□□□ -0.22
PABPC4-225	ENST00000531243	TLX1NB	P0CAT3	122 aa		13.66	□□□□□ -0.22
PABPC4-225	ENST00000531243	PLEKHB2	Q96CS7	222 aa		13.65	□□□□□ -0.22
PABPC4-225	ENST00000531243	DNAH5	Q8TE73	4624 aa		13.64	□□□□□ -0.23
PABPC4-225	ENST00000531243	IGKV2-24	A0A0C4DH68	120 aa		13.64	□□□□□ -0.23
PABPC4-225	ENST00000531243	LEPROT	O15243	131 aa		13.64	□□□□□ -0.23
PABPC4-225	ENST00000531243	GAGE2B	Q13066	116 aa		13.64	□□□□□ -0.23
PABPC4-225	ENST00000531243	FAM30A	Q9NZY2	134 aa		13.64	□□□□□ -0.23
PABPC4-225	ENST00000531243	NDUFC2-KCTD14	E9PQ53	114 aa		13.63	□□□□□ -0.23
PABPC4-225	ENST00000531243	PKHD1	P08F94	4074 aa		13.63	□□□□□ -0.23
PABPC4-225	ENST00000531243		A0A096LNI7	61 aa		13.62	□□□□□ -0.23
PABPC4-225	ENST00000531243	PTTG1IP	P53801	180 aa		13.62	□□□□□ -0.23
PABPC4-225	ENST00000531243	CIRBP	Q14011	172 aa	Known RBP	13.61	□□□□□ -0.23
PABPC4-225	ENST00000531243	MAJIN	Q3KP22	176 aa		13.61	□□□□□ -0.23
PABPC4-225	ENST00000531243	SPACA4	Q8TDM5	124 aa		13.61	□□□□□ -0.23
PABPC4-225	ENST00000531243	LGALS3	P17931	250 aa	Known RBP	13.6	□□□□□ -0.23
PABPC4-225	ENST00000531243	HERV-K104	P63124	156 aa		13.6	□□□□□ -0.23
PABPC4-225	ENST00000531243	C9orf116	Q5BN46	136 aa	Predicted RBP	13.6	□□□□□ -0.23
PABPC4-225	ENST00000531243	TMA7	Q9Y2S6	64 aa	Known RBP	13.6	□□□□□ -0.23
PABPC4-225	ENST00000531243	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.6	□□□□□ -0.23
PABPC4-225	ENST00000531243	MYMX	A0A1B0GTQ4	84 aa		13.59	□□□□□ -0.23
PABPC4-225	ENST00000531243		E9PLD3	99 aa		13.59	□□□□□ -0.23
PABPC4-225	ENST00000531243	NMU	P48645	174 aa		13.59	□□□□□ -0.23
PABPC4-225	ENST00000531243	XG	P55808	180 aa		13.59	□□□□□ -0.23
PABPC4-225	ENST00000531243	COX17	Q14061	63 aa		13.59	□□□□□ -0.23
PABPC4-225	ENST00000531243	LINC00587	B1AMM8	73 aa		13.58	□□□□□ -0.24
PABPC4-225	ENST00000531243		J3QQQ9	107 aa		13.58	□□□□□ -0.24
PABPC4-225	ENST00000531243	CHTF8	P0CG12	524 aa		13.58	□□□□□ -0.24
PABPC4-225	ENST00000531243	GAGE2E	Q4V326	116 aa		13.58	□□□□□ -0.24
PABPC4-225	ENST00000531243		Q6ZRP5	223 aa		13.58	□□□□□ -0.24
PABPC4-225	ENST00000531243	SCX	Q7RTU7	201 aa		13.58	□□□□□ -0.24
PABPC4-225	ENST00000531243	GAGE2D	Q9UEU5	116 aa		13.58	□□□□□ -0.24
PABPC4-225	ENST00000531243	NDUFA12	Q9UI09	145 aa		13.58	□□□□□ -0.24
PABPC4-225	ENST00000531243	ZNF625	Q96I27	306 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPC4-225	ENST00000531243	STPG4	Q8N801	248 aa		13.56	□□□□□ -0.24
PABPC4-225	ENST00000531243	CIRBP-AS1	Q8TBR5	109 aa		13.56	□□□□□ -0.24
PABPC4-225	ENST00000531243	ERG28	Q9UKR5	140 aa		13.56	□□□□□ -0.24
PABPC4-225	ENST00000531243	DYNC1H1	Q14204	4646 aa	Known RBP	13.55	□□□□□ -0.24
PABPC4-225	ENST00000531243		A0A087WYN8	130 aa		13.54	□□□□□ -0.24
PABPC4-225	ENST00000531243	PANO1	I0J062	215 aa		13.54	□□□□□ -0.24
PABPC4-225	ENST00000531243	SCGB1D1	O95968	90 aa		13.54	□□□□□ -0.24
PABPC4-225	ENST00000531243	PFN2	P35080	140 aa		13.54	□□□□□ -0.24
PABPC4-225	ENST00000531243	MEIG1	Q5JSS6	88 aa		13.54	□□□□□ -0.24
PABPC4-225	ENST00000531243	LRP1B	Q9NZR2	4599 aa		13.53	□□□□□ -0.24
PABPC4-225	ENST00000531243	HSBP1L1	C9JCN9	74 aa		13.53	□□□□□ -0.24
PABPC4-225	ENST00000531243	BIRC6	Q9NR09	4857 aa		13.52	□□□□□ -0.24
PABPC4-225	ENST00000531243	HAMP	P81172	84 aa		13.52	□□□□□ -0.25
PABPC4-225	ENST00000531243	ATOH7	Q8N100	152 aa		13.52	□□□□□ -0.25
PABPC4-225	ENST00000531243	PLAC8	Q9NZF1	115 aa		13.52	□□□□□ -0.25
PABPC4-225	ENST00000531243	LINC00158	P58513	81 aa		13.5	□□□□□ -0.25
PABPC4-225	ENST00000531243	TSPEAR-AS2	P59090	65 aa		13.5	□□□□□ -0.25
PABPC4-225	ENST00000531243	FAM229A	H3BQW9	127 aa		13.46	□□□□□ -0.25
PABPC4-225	ENST00000531243	C9orf129	Q5T035	196 aa	Known RBP	13.46	□□□□□ -0.25
PABPC4-225	ENST00000531243	C7orf33	Q8WU49	177 aa		13.46	□□□□□ -0.25
PABPC4-225	ENST00000531243	XAGE1A	Q9HD64	81 aa		13.46	□□□□□ -0.25
PABPC4-225	ENST00000531243	SMR3B	P02814	79 aa	Predicted RBP	13.45	□□□□□ -0.26
PABPC4-225	ENST00000531243	SMIM13	P0DJ93	91 aa		13.45	□□□□□ -0.26
PABPC4-225	ENST00000531243		A0A0U1RRA0	63 aa		13.44	□□□□□ -0.26
PABPC4-225	ENST00000531243		A0A1W2PNN7	141 aa		13.44	□□□□□ -0.26
PABPC4-225	ENST00000531243	ZNF815P	A8K554	130 aa		13.44	□□□□□ -0.26
PABPC4-225	ENST00000531243	IGKV2D-26	A0A0A0MRZ7	120 aa		13.43	□□□□□ -0.26
PABPC4-225	ENST00000531243	ANKRD39	Q53RE8	183 aa		13.43	□□□□□ -0.26
PABPC4-225	ENST00000531243	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.43	□□□□□ -0.26
PABPC4-225	ENST00000531243		Q8N1X5	172 aa		13.43	□□□□□ -0.26
PABPC4-225	ENST00000531243	EPM2A	B3EWF7	344 aa		13.42	□□□□□ -0.26
PABPC4-225	ENST00000531243	JOSD1	Q15040	202 aa	Predicted RBP	13.42	□□□□□ -0.26
PABPC4-225	ENST00000531243	LINC00528	Q8N1L1	170 aa		13.42	□□□□□ -0.26
PABPC4-225	ENST00000531243	SND1-IT1	Q9HBX3	110 aa		13.42	□□□□□ -0.26
PABPC4-225	ENST00000531243	DNAH8	Q96JB1	4490 aa		13.42	□□□□□ -0.26
PABPC4-225	ENST00000531243		A0A0J9YXY3	114 aa		13.41	□□□□□ -0.26
PABPC4-225	ENST00000531243	PLA2G2D	Q9UNK4	145 aa		13.41	□□□□□ -0.26
PABPC4-225	ENST00000531243	FAM168B	A1KXE4	195 aa		13.4	□□□□□ -0.26
PABPC4-225	ENST00000531243	RPL24	P83731	157 aa	Known RBP	13.4	□□□□□ -0.26
PABPC4-225	ENST00000531243	MIR7-3HG	Q8N6C7	128 aa		13.4	□□□□□ -0.26
PABPC4-225	ENST00000531243	PLA2G1B	P04054	148 aa	Known RBP	13.39	□□□□□ -0.27
PABPC4-225	ENST00000531243	SCGB1D4	Q6XE38	83 aa		13.39	□□□□□ -0.27
PABPC4-225	ENST00000531243		M0QXV9	152 aa		13.38	□□□□□ -0.27
PABPC4-225	ENST00000531243	MIEN1	Q9BRT3	115 aa		13.38	□□□□□ -0.27
PABPC4-225	ENST00000531243	TIMM17B	O60830	172 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms