RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 LOC105371267A0A1B0GV96 52 aa10.51□□□□□ -0.73
GSDMD-210ENST00000531173 H0Y8G0 127 aa10.51□□□□□ -0.73
GSDMD-210ENST00000531173 SERTAD4-AS1Q5TG53 156 aa10.51□□□□□ -0.73
GSDMD-210ENST00000531173 TRAV13-1A0A0B4J241 112 aa10.5□□□□□ -0.73
GSDMD-210ENST00000531173 MT1HL1P0DM35 61 aa10.5□□□□□ -0.73
GSDMD-210ENST00000531173 IGLC3P0DOY3 106 aa10.5□□□□□ -0.73
GSDMD-210ENST00000531173 CFAP161Q6P656 301 aa10.5□□□□□ -0.73
GSDMD-210ENST00000531173 MRPL35Q9NZE8 188 aaKnown RBP10.5□□□□□ -0.73
GSDMD-210ENST00000531173 TINCRA0A1B0GVN0 87 aa10.49□□□□□ -0.73
GSDMD-210ENST00000531173 SEC11AP67812 179 aa10.49□□□□□ -0.73
GSDMD-210ENST00000531173 COX6A2Q02221 97 aa10.49□□□□□ -0.73
GSDMD-210ENST00000531173 SS18Q15532 418 aa10.49□□□□□ -0.73
GSDMD-210ENST00000531173 HIGD2BQ4VC39 106 aa10.49□□□□□ -0.73
GSDMD-210ENST00000531173 LINC00242Q5T6M2 205 aa10.49□□□□□ -0.73
GSDMD-210ENST00000531173 A0A0J9YXV3 536 aa10.48□□□□□ -0.73
GSDMD-210ENST00000531173 C20orf202A1L168 122 aa10.48□□□□□ -0.73
GSDMD-210ENST00000531173 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
GSDMD-210ENST00000531173 PLNP26678 52 aa10.47□□□□□ -0.73
GSDMD-210ENST00000531173 AKR1D1P51857 326 aa10.47□□□□□ -0.73
GSDMD-210ENST00000531173 HERVK_113P63121 156 aa10.47□□□□□ -0.73
GSDMD-210ENST00000531173 JOSD1Q15040 202 aaPredicted RBP10.47□□□□□ -0.73
GSDMD-210ENST00000531173 C11orf86A6NJI1 115 aa10.46□□□□□ -0.73
GSDMD-210ENST00000531173 DPM2O94777 84 aa10.46□□□□□ -0.73
GSDMD-210ENST00000531173 XCL1P47992 114 aa10.46□□□□□ -0.73
GSDMD-210ENST00000531173 CD164L2Q6UWJ8 174 aa10.46□□□□□ -0.73
GSDMD-210ENST00000531173 Q6ZRU5 148 aa10.46□□□□□ -0.73
GSDMD-210ENST00000531173 IGHV3OR16-9A0A0B4J2B5 98 aa10.45□□□□□ -0.74
GSDMD-210ENST00000531173 IGKCP01834 107 aa10.45□□□□□ -0.74
GSDMD-210ENST00000531173 PMCHL2Q9BQD1 86 aa10.45□□□□□ -0.74
GSDMD-210ENST00000531173 GEMIN7Q9H840 131 aaKnown RBP10.45□□□□□ -0.74
GSDMD-210ENST00000531173 A0A096LNI7 61 aa10.44□□□□□ -0.74
GSDMD-210ENST00000531173 SCGB1D1O95968 90 aa10.43□□□□□ -0.74
GSDMD-210ENST00000531173 ZNF22P17026 224 aaPredicted RBP10.43□□□□□ -0.74
GSDMD-210ENST00000531173 PYY3Q5JQD4 70 aa10.43□□□□□ -0.74
GSDMD-210ENST00000531173 DPH3Q96FX2 82 aa10.43□□□□□ -0.74
GSDMD-210ENST00000531173 LINC01561Q8N1V8 128 aa10.42□□□□□ -0.74
GSDMD-210ENST00000531173 LINC00526Q96FQ7 95 aa10.42□□□□□ -0.74
GSDMD-210ENST00000531173 CDKN2A-AS1Q9UH64 79 aa10.42□□□□□ -0.74
GSDMD-210ENST00000531173 A0A087WZ39 114 aa10.41□□□□□ -0.74
GSDMD-210ENST00000531173 IGHV1-58A0A0C4DH39 117 aa10.41□□□□□ -0.74
GSDMD-210ENST00000531173 IGKV2-24A0A0C4DH68 120 aa10.41□□□□□ -0.74
GSDMD-210ENST00000531173 MAJINQ3KP22 176 aa10.41□□□□□ -0.74
GSDMD-210ENST00000531173 LINC00469Q8N7U9 141 aa10.41□□□□□ -0.74
GSDMD-210ENST00000531173 PRR3P79522 188 aaKnown RBP10.4□□□□□ -0.74
GSDMD-210ENST00000531173 H3BRM9 83 aa10.39□□□□□ -0.75
GSDMD-210ENST00000531173 COX7A2LO14548 114 aa10.39□□□□□ -0.75
GSDMD-210ENST00000531173 TMEM170BQ5T4T1 132 aa10.39□□□□□ -0.75
GSDMD-210ENST00000531173 STPG4Q8N801 248 aa10.39□□□□□ -0.75
GSDMD-210ENST00000531173 PLA2G2DQ9UNK4 145 aa10.39□□□□□ -0.75
GSDMD-210ENST00000531173 TMEM223A0PJW6 202 aa10.38□□□□□ -0.75
GSDMD-210ENST00000531173 C5orf38Q86SI9 138 aa10.38□□□□□ -0.75
GSDMD-210ENST00000531173 ATOH7Q8N100 152 aa10.38□□□□□ -0.75
GSDMD-210ENST00000531173 C7orf33Q8WU49 177 aa10.38□□□□□ -0.75
GSDMD-210ENST00000531173 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
GSDMD-210ENST00000531173 SMIM1B2RUZ4 78 aa10.37□□□□□ -0.75
GSDMD-210ENST00000531173 SMIM6P0DI80 62 aa10.37□□□□□ -0.75
GSDMD-210ENST00000531173 LINC00474Q9P2X8 69 aa10.37□□□□□ -0.75
GSDMD-210ENST00000531173 IGLV5-39A0A0G2JS06 123 aa10.36□□□□□ -0.75
GSDMD-210ENST00000531173 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
GSDMD-210ENST00000531173 SPINK8P0C7L1 97 aa10.35□□□□□ -0.75
GSDMD-210ENST00000531173 HERVK_113P61574 105 aa10.35□□□□□ -0.75
GSDMD-210ENST00000531173 APOMO95445 188 aa10.34□□□□□ -0.75
GSDMD-210ENST00000531173 MALP21145 153 aa10.34□□□□□ -0.75
GSDMD-210ENST00000531173 LRP2P98164 4655 aa10.33□□□□□ -0.76
GSDMD-210ENST00000531173 E9PLD3 99 aa10.33□□□□□ -0.76
GSDMD-210ENST00000531173 ZNF561-AS1K7EIQ3 104 aa10.33□□□□□ -0.76
GSDMD-210ENST00000531173 PTTG1IPP53801 180 aa10.33□□□□□ -0.76
GSDMD-210ENST00000531173 PKIGQ9Y2B9 76 aa10.33□□□□□ -0.76
GSDMD-210ENST00000531173 HSBP1L1C9JCN9 74 aa10.32□□□□□ -0.76
GSDMD-210ENST00000531173 ANKRD39Q53RE8 183 aa10.32□□□□□ -0.76
GSDMD-210ENST00000531173 LINC01600Q96MT4 127 aa10.32□□□□□ -0.76
GSDMD-210ENST00000531173 LEPROTO15243 131 aa10.31□□□□□ -0.76
GSDMD-210ENST00000531173 SRSF9Q13242 221 aaKnown RBP eCLIP10.31□□□□□ -0.761e-7■□□□□ 10.2
GSDMD-210ENST00000531173 VAMP8Q9BV40 100 aa10.31□□□□□ -0.76
GSDMD-210ENST00000531173 KIAA0087Q14695 138 aa10.3□□□□□ -0.76
GSDMD-210ENST00000531173 Q8IZM0 81 aa10.3□□□□□ -0.76
GSDMD-210ENST00000531173 ORAOV1Q8WV07 137 aa10.3□□□□□ -0.76
GSDMD-210ENST00000531173 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
GSDMD-210ENST00000531173 C2orf48Q96LS8 159 aa10.3□□□□□ -0.76
GSDMD-210ENST00000531173 IGKV2D-26A0A0A0MRZ7 120 aa10.29□□□□□ -0.76
GSDMD-210ENST00000531173 LOC107984640A0A0U1RRK4 108 aa10.29□□□□□ -0.76
GSDMD-210ENST00000531173 COX7B2Q8TF08 81 aa10.29□□□□□ -0.76
GSDMD-210ENST00000531173 RNF213Q63HN8 5207 aa10.28□□□□□ -0.76
GSDMD-210ENST00000531173 A0A1W2PNN7 141 aa10.28□□□□□ -0.76
GSDMD-210ENST00000531173 TSPEAR-AS2P59090 65 aa10.28□□□□□ -0.76
GSDMD-210ENST00000531173 PAM16Q9Y3D7 125 aa10.28□□□□□ -0.76
GSDMD-210ENST00000531173 J3QQQ9 107 aa10.27□□□□□ -0.77
GSDMD-210ENST00000531173 S100A12P80511 92 aa10.27□□□□□ -0.77
GSDMD-210ENST00000531173 SPAG11BQ08648 103 aa10.27□□□□□ -0.77
GSDMD-210ENST00000531173 SPATA45Q537H7 98 aa10.27□□□□□ -0.77
GSDMD-210ENST00000531173 SPINK6Q6UWN8 80 aa10.27□□□□□ -0.77
GSDMD-210ENST00000531173 CAMK2N2Q96S95 79 aa10.27□□□□□ -0.77
GSDMD-210ENST00000531173 F8WDY8 70 aa10.26□□□□□ -0.77
GSDMD-210ENST00000531173 CXCL5P42830 114 aa10.26□□□□□ -0.77
GSDMD-210ENST00000531173 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
GSDMD-210ENST00000531173 GAGE2BQ13066 116 aa10.26□□□□□ -0.77
GSDMD-210ENST00000531173 RNF151Q2KHN1 245 aa10.26□□□□□ -0.77
GSDMD-210ENST00000531173 Q6ZRP5 223 aa10.26□□□□□ -0.77
GSDMD-210ENST00000531173 TOMM7Q9P0U1 55 aa10.26□□□□□ -0.77
GSDMD-210ENST00000531173 PRSS2P07478 247 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms