RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 A0A1B0GU69 56 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 C10orf142B7Z368 130 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 F8WEM9 126 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 H0Y9P7 68 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 CFDP00746 253 aaPredicted RBP0.47□□□□□ -2.33
FGFR1-235ENST00000530701 DEFB107AQ8IZN7 70 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 C20orf78Q9BR46 151 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 RABAC1Q9UI14 185 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 SETBP1Q9Y6X0 1596 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 FBN3Q75N90 2809 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 TTC28Q96AY4 2481 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 MACF1Q9UPN3 7388 aaKnown RBP0.47□□□□□ -2.33
FGFR1-235ENST00000530701 CCDC141Q6ZP82 1450 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 NLRP1Q9C000 1473 aa0.47□□□□□ -2.33
FGFR1-235ENST00000530701 EDC4Q6P2E9 1401 aaKnown RBP0.47□□□□□ -2.33
FGFR1-235ENST00000530701 C2CD3Q4AC94 2353 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 SPINK1P00995 79 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 C6orf201Q7Z4U5 140 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 C9orf62Q8N4C0 152 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 CUX1P39880 1505 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 RGPD2P0DJD1 1756 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 NRXN1Q9ULB1 1477 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 SPTBN2O15020 2390 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 KIAA0556O60303 1618 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 LAMC1P11047 1609 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 NHSL1Q5SYE7 1610 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 MAP3K4Q9Y6R4 1608 aa0.46□□□□□ -2.34
FGFR1-235ENST00000530701 PLIN4Q96Q06 1357 aa0.45□□□□□ -2.34
FGFR1-235ENST00000530701 K7EP34 96 aa0.45□□□□□ -2.34
FGFR1-235ENST00000530701 HMGN2P05204 90 aaKnown RBP0.45□□□□□ -2.34
FGFR1-235ENST00000530701 Q5BKY6 102 aa0.45□□□□□ -2.34
FGFR1-235ENST00000530701 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
FGFR1-235ENST00000530701 USMG5Q96IX5 58 aa0.45□□□□□ -2.34
FGFR1-235ENST00000530701 PSENENQ9NZ42 101 aa0.45□□□□□ -2.34
FGFR1-235ENST00000530701 HIGD1BQ9P298 99 aa0.45□□□□□ -2.34
FGFR1-235ENST00000530701 PTPRZ1P23471 2315 aaPredicted RBP0.45□□□□□ -2.34
FGFR1-235ENST00000530701 CEP162Q5TB80 1403 aa0.45□□□□□ -2.34
FGFR1-235ENST00000530701 UACAQ9BZF9 1416 aa0.45□□□□□ -2.34
FGFR1-235ENST00000530701 KIF14Q15058 1648 aa0.45□□□□□ -2.34
FGFR1-235ENST00000530701 LRRC37AA6NMS7 1700 aa0.44□□□□□ -2.34
FGFR1-235ENST00000530701 CCDC18Q5T9S5 1454 aa0.44□□□□□ -2.34
FGFR1-235ENST00000530701 KANTRA0A1W2PQU2 76 aa0.44□□□□□ -2.34
FGFR1-235ENST00000530701 COX8AP10176 69 aa0.44□□□□□ -2.34
FGFR1-235ENST00000530701 SNRPFP62306 86 aaKnown RBP0.44□□□□□ -2.34
FGFR1-235ENST00000530701 PLGLAQ15195 96 aa0.44□□□□□ -2.34
FGFR1-235ENST00000530701 SCRIBQ14160 1630 aa0.44□□□□□ -2.34
FGFR1-235ENST00000530701 PTPRQQ9UMZ3 2332 aa0.44□□□□□ -2.34
FGFR1-235ENST00000530701 PKDREJQ9NTG1 2253 aa0.44□□□□□ -2.34
FGFR1-235ENST00000530701 FMN2Q9NZ56 1722 aa0.44□□□□□ -2.34
FGFR1-235ENST00000530701 ABCA12Q86UK0 2595 aa0.44□□□□□ -2.34
FGFR1-235ENST00000530701 TPRP12270 2363 aaKnown RBP0.43□□□□□ -2.34
FGFR1-235ENST00000530701 IGF2RP11717 2491 aa0.43□□□□□ -2.34
FGFR1-235ENST00000530701 LINC00959A0A1B0GUT2 108 aa0.43□□□□□ -2.34
FGFR1-235ENST00000530701 I3L2K1 104 aa0.43□□□□□ -2.34
FGFR1-235ENST00000530701 ACYP1P07311 99 aa0.43□□□□□ -2.34
FGFR1-235ENST00000530701 S100A13Q99584 98 aa0.43□□□□□ -2.34
FGFR1-235ENST00000530701 TULP4Q9NRJ4 1543 aa0.43□□□□□ -2.34
FGFR1-235ENST00000530701 AHNAK2Q8IVF2 5795 aa0.43□□□□□ -2.34
FGFR1-235ENST00000530701 LTN1O94822 1766 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 BCORQ6W2J9 1755 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 QSER1Q2KHR3 1735 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 PRH1P02810 166 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 COX6B1P14854 86 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 WFDC2Q14508 124 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 LINC00643Q86TS7 51 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 DEFB123Q8N688 67 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 SMR3AQ99954 134 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 KRTAP4-1Q9BYQ7 146 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 CRIPTQ9P021 101 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 APCP25054 2843 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 PPRC1Q5VV67 1664 aaKnown RBP0.42□□□□□ -2.34
FGFR1-235ENST00000530701 ALKQ9UM73 1620 aa0.42□□□□□ -2.34
FGFR1-235ENST00000530701 MEGF8Q7Z7M0 2845 aa0.41□□□□□ -2.34
FGFR1-235ENST00000530701 A0A1B0GUT8 65 aa0.41□□□□□ -2.34
FGFR1-235ENST00000530701 ADIRFQ15847 76 aa0.41□□□□□ -2.34
FGFR1-235ENST00000530701 DEFB112Q30KQ8 113 aa0.41□□□□□ -2.34
FGFR1-235ENST00000530701 DEFB109BQ30KR1 87 aa0.41□□□□□ -2.34
FGFR1-235ENST00000530701 NMSQ5H8A3 153 aa0.41□□□□□ -2.34
FGFR1-235ENST00000530701 FXYD6Q9H0Q3 95 aa0.41□□□□□ -2.34
FGFR1-235ENST00000530701 CELSR2Q9HCU4 2923 aa0.41□□□□□ -2.34
FGFR1-235ENST00000530701 TIAM2Q8IVF5 1701 aa0.41□□□□□ -2.34
FGFR1-235ENST00000530701 SAMD9Q5K651 1589 aa0.4□□□□□ -2.34
FGFR1-235ENST00000530701 SPTBN1Q01082 2364 aaKnown RBP0.4□□□□□ -2.34
FGFR1-235ENST00000530701 NAV2Q8IVL1 2488 aa0.4□□□□□ -2.35
FGFR1-235ENST00000530701 POLQO75417 2590 aa0.4□□□□□ -2.35
FGFR1-235ENST00000530701 MYMXA0A1B0GTQ4 84 aa0.4□□□□□ -2.35
FGFR1-235ENST00000530701 IQCF6A8MYZ5 107 aa0.4□□□□□ -2.35
FGFR1-235ENST00000530701 I3L3M4 83 aa0.4□□□□□ -2.35
FGFR1-235ENST00000530701 IGLC2P0DOY2 106 aa0.4□□□□□ -2.35
FGFR1-235ENST00000530701 IGLC3P0DOY3 106 aa0.4□□□□□ -2.35
FGFR1-235ENST00000530701 RPL38P63173 70 aaKnown RBP0.4□□□□□ -2.35
FGFR1-235ENST00000530701 Q5VSD8 79 aa0.4□□□□□ -2.35
FGFR1-235ENST00000530701 UBE2D4Q9Y2X8 147 aa0.4□□□□□ -2.35
FGFR1-235ENST00000530701 RGPD8O14715 1765 aaPredicted RBP0.4□□□□□ -2.35
FGFR1-235ENST00000530701 RGPD5Q99666 1765 aa0.4□□□□□ -2.35
FGFR1-235ENST00000530701 BDP1A6H8Y1 2624 aa0.39□□□□□ -2.35
FGFR1-235ENST00000530701 NEXMIFQ5QGS0 1516 aa0.39□□□□□ -2.35
FGFR1-235ENST00000530701 SPTY2D1-AS1A0A0U1RR47 76 aa0.39□□□□□ -2.35
FGFR1-235ENST00000530701 CEBPZOSA8MTT3 80 aa0.39□□□□□ -2.35
FGFR1-235ENST00000530701 K7EQZ3 153 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms