RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 LINC00526Q96FQ7 95 aa13.2□□□□□ -0.3
PPP1CA-204ENST00000526510 SPANXDQ9BXN6 97 aa13.2□□□□□ -0.3
PPP1CA-204ENST00000526510 SPANXCQ9NY87 97 aa13.2□□□□□ -0.3
PPP1CA-204ENST00000526510 SPAG11BQ08648 103 aa13.19□□□□□ -0.3
PPP1CA-204ENST00000526510 C6orf223Q8N319 242 aa13.19□□□□□ -0.3
PPP1CA-204ENST00000526510 C15orf56Q8N910 161 aa13.19□□□□□ -0.3
PPP1CA-204ENST00000526510 A0A0U1RRA0 63 aa13.18□□□□□ -0.3
PPP1CA-204ENST00000526510 COL5A1-AS1Q5SY13 56 aa13.18□□□□□ -0.3
PPP1CA-204ENST00000526510 DAND5Q8N907 189 aa13.18□□□□□ -0.3
PPP1CA-204ENST00000526510 WWC2-AS2Q96NR7 200 aa13.18□□□□□ -0.3
PPP1CA-204ENST00000526510 SMIM13P0DJ93 91 aa13.18□□□□□ -0.3
PPP1CA-204ENST00000526510 MEIG1Q5JSS6 88 aa13.18□□□□□ -0.3
PPP1CA-204ENST00000526510 CASC10Q5T4H9 136 aa13.18□□□□□ -0.3
PPP1CA-204ENST00000526510 CFAP161Q6P656 301 aa13.18□□□□□ -0.3
PPP1CA-204ENST00000526510 MUSTN1Q8IVN3 82 aa13.17□□□□□ -0.3
PPP1CA-204ENST00000526510 PTTG1IPP53801 180 aa13.16□□□□□ -0.3
PPP1CA-204ENST00000526510 CKS1BP61024 79 aa13.16□□□□□ -0.3
PPP1CA-204ENST00000526510 CIRBPQ14011 172 aaKnown RBP13.16□□□□□ -0.3
PPP1CA-204ENST00000526510 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
PPP1CA-204ENST00000526510 EIF4EBP3O60516 100 aaPredicted RBP13.15□□□□□ -0.3
PPP1CA-204ENST00000526510 CXCL5P42830 114 aa13.15□□□□□ -0.31
PPP1CA-204ENST00000526510 HIGD2BQ4VC39 106 aa13.15□□□□□ -0.31
PPP1CA-204ENST00000526510 C10orf25Q5T742 122 aa13.15□□□□□ -0.31
PPP1CA-204ENST00000526510 NTN5Q8WTR8 489 aaPredicted RBP13.15□□□□□ -0.31
PPP1CA-204ENST00000526510 NPC2P61916 151 aa13.14□□□□□ -0.31
PPP1CA-204ENST00000526510 UNQ6190/PRO20217Q6UXQ8 127 aa13.14□□□□□ -0.31
PPP1CA-204ENST00000526510 RMI2Q96E14 147 aa13.14□□□□□ -0.31
PPP1CA-204ENST00000526510 NHP2Q9NX24 153 aaKnown RBP13.14□□□□□ -0.31
PPP1CA-204ENST00000526510 A6NDN8 102 aa13.13□□□□□ -0.31
PPP1CA-204ENST00000526510 Q6ZVH6 145 aa13.13□□□□□ -0.31
PPP1CA-204ENST00000526510 ERG28Q9UKR5 140 aa13.13□□□□□ -0.31
PPP1CA-204ENST00000526510 NBDYA0A0U1RRE5 68 aa13.12□□□□□ -0.31
PPP1CA-204ENST00000526510 K7ERJ3 54 aa13.12□□□□□ -0.31
PPP1CA-204ENST00000526510 TAX1BP3O14907 124 aa13.12□□□□□ -0.31
PPP1CA-204ENST00000526510 DNAH10Q8IVF4 4471 aa13.11□□□□□ -0.31
PPP1CA-204ENST00000526510 PFN2P35080 140 aa13.11□□□□□ -0.31
PPP1CA-204ENST00000526510 C9orf116Q5BN46 136 aaPredicted RBP13.11□□□□□ -0.31
PPP1CA-204ENST00000526510 SOSTDC1Q6X4U4 206 aa13.11□□□□□ -0.31
PPP1CA-204ENST00000526510 LINC00308Q8TCZ7 52 aa13.11□□□□□ -0.31
PPP1CA-204ENST00000526510 GVQW2A0A096LPI5 108 aaPredicted RBP13.1□□□□□ -0.31
PPP1CA-204ENST00000526510 A0A1B0GWB2 263 aa13.1□□□□□ -0.31
PPP1CA-204ENST00000526510 A4D1N5 150 aa13.1□□□□□ -0.31
PPP1CA-204ENST00000526510 LINC00158P58513 81 aa13.1□□□□□ -0.31
PPP1CA-204ENST00000526510 ZNF561-AS1K7EIQ3 104 aa13.09□□□□□ -0.31
PPP1CA-204ENST00000526510 IFITM1P13164 125 aa13.09□□□□□ -0.31
PPP1CA-204ENST00000526510 MIR7-3HGQ8N6C7 128 aa13.09□□□□□ -0.31
PPP1CA-204ENST00000526510 RPL24P83731 157 aaKnown RBP13.08□□□□□ -0.31
PPP1CA-204ENST00000526510 TMEM238LA0A1B0GVL6 79 aa13.08□□□□□ -0.32
PPP1CA-204ENST00000526510 A6NJY4 79 aa13.08□□□□□ -0.32
PPP1CA-204ENST00000526510 TTC32Q5I0X7 151 aa13.08□□□□□ -0.32
PPP1CA-204ENST00000526510 COX11Q9Y6N1 276 aa13.08□□□□□ -0.32
PPP1CA-204ENST00000526510 USP17L23D6RBM5 183 aa13.07□□□□□ -0.32
PPP1CA-204ENST00000526510 CFC1BP0CG36 223 aa13.07□□□□□ -0.32
PPP1CA-204ENST00000526510 CFC1P0CG37 223 aa13.07□□□□□ -0.32
PPP1CA-204ENST00000526510 C6orf48Q9UBA6 75 aa13.07□□□□□ -0.32
PPP1CA-204ENST00000526510 A0A1B0GV90 55 aa13.06□□□□□ -0.32
PPP1CA-204ENST00000526510 RAB37Q96AX2 223 aa13.06□□□□□ -0.32
PPP1CA-204ENST00000526510 C2orf48Q96LS8 159 aa13.06□□□□□ -0.32
PPP1CA-204ENST00000526510 CAMK2N2Q96S95 79 aa13.05□□□□□ -0.32
PPP1CA-204ENST00000526510 LECT2O14960 151 aa13.05□□□□□ -0.32
PPP1CA-204ENST00000526510 COX17Q14061 63 aa13.05□□□□□ -0.32
PPP1CA-204ENST00000526510 Q6ZRU5 148 aa13.05□□□□□ -0.32
PPP1CA-204ENST00000526510 WFDC2Q14508 124 aa13.04□□□□□ -0.32
PPP1CA-204ENST00000526510 M0R2N4 97 aa13.03□□□□□ -0.32
PPP1CA-204ENST00000526510 SLPIP03973 132 aa13.02□□□□□ -0.32
PPP1CA-204ENST00000526510 PPDPFQ9H3Y8 114 aa13.02□□□□□ -0.32
PPP1CA-204ENST00000526510 Q6ZRN7 208 aaPredicted RBP13.02□□□□□ -0.33
PPP1CA-204ENST00000526510 TRBV30A0A0K0K1B3 111 aa13.01□□□□□ -0.33
PPP1CA-204ENST00000526510 C3orf84H3BNL1 204 aa13.01□□□□□ -0.33
PPP1CA-204ENST00000526510 NAA38Q9BRA0 125 aaKnown RBP13.01□□□□□ -0.33
PPP1CA-204ENST00000526510 KMT2AQ03164 3969 aa13.01□□□□□ -0.33
PPP1CA-204ENST00000526510 TRAV16A0A0A6YYK6 109 aaPredicted RBP13□□□□□ -0.33
PPP1CA-204ENST00000526510 F8WDY8 70 aa13□□□□□ -0.33
PPP1CA-204ENST00000526510 Q6ZR54 194 aa13□□□□□ -0.33
PPP1CA-204ENST00000526510 COPS9Q8WXC6 57 aa13□□□□□ -0.33
PPP1CA-204ENST00000526510 A0A0B4J2C4 111 aa12.99□□□□□ -0.33
PPP1CA-204ENST00000526510 C9orf118A6NHY6 69 aa12.99□□□□□ -0.33
PPP1CA-204ENST00000526510 SYCNQ0VAF6 134 aa12.99□□□□□ -0.33
PPP1CA-204ENST00000526510 ALMS1Q8TCU4 4167 aa12.99□□□□□ -0.33
PPP1CA-204ENST00000526510 PSCAO43653 123 aa12.99□□□□□ -0.33
PPP1CA-204ENST00000526510 LY6G6CO95867 125 aa12.98□□□□□ -0.33
PPP1CA-204ENST00000526510 LINC00476Q8WZB0 136 aa12.98□□□□□ -0.33
PPP1CA-204ENST00000526510 SND1-IT1Q9HBX3 110 aa12.98□□□□□ -0.33
PPP1CA-204ENST00000526510 LOC107984156A0A0G2JMH3 177 aa12.97□□□□□ -0.33
PPP1CA-204ENST00000526510 ARL17AQ8IVW1 177 aa12.97□□□□□ -0.33
PPP1CA-204ENST00000526510 PRO1854Q9UHT4 67 aa12.97□□□□□ -0.33
PPP1CA-204ENST00000526510 DNAH6Q9C0G6 4158 aa12.97□□□□□ -0.33
PPP1CA-204ENST00000526510 H3BUT2 72 aa12.96□□□□□ -0.33
PPP1CA-204ENST00000526510 PGPEP1Q9NXJ5 209 aa12.96□□□□□ -0.34
PPP1CA-204ENST00000526510 TSPAN13O95857 204 aa12.95□□□□□ -0.34
PPP1CA-204ENST00000526510 CARD19Q96LW7 228 aa12.95□□□□□ -0.34
PPP1CA-204ENST00000526510 LRCOL1A6NCL2 159 aa12.94□□□□□ -0.34
PPP1CA-204ENST00000526510 IGKV2-28A0A075B6P5 120 aa12.93□□□□□ -0.34
PPP1CA-204ENST00000526510 IGKV2D-28P01615 120 aa12.93□□□□□ -0.34
PPP1CA-204ENST00000526510 Q8NDZ9 215 aa12.93□□□□□ -0.34
PPP1CA-204ENST00000526510 DNAH2Q9P225 4427 aa12.92□□□□□ -0.34
PPP1CA-204ENST00000526510 RNF151Q2KHN1 245 aa12.92□□□□□ -0.34
PPP1CA-204ENST00000526510 NDUFC2-KCTD14E9PQ53 114 aa12.91□□□□□ -0.34
PPP1CA-204ENST00000526510 A0A1W2PPM0 123 aa12.89□□□□□ -0.35
PPP1CA-204ENST00000526510 H7C2G1 150 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms