RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 COX19Q49B96 90 aa11.42□□□□□ -0.58
CAPN1-203ENST00000525013 RHEBQ15382 184 aa11.41□□□□□ -0.58
CAPN1-203ENST00000525013 MRPL18Q9H0U6 180 aaKnown RBP11.41□□□□□ -0.58
CAPN1-203ENST00000525013 C10orf91Q5T1B1 145 aa11.4□□□□□ -0.58
CAPN1-203ENST00000525013 FA2HQ7L5A8 372 aa11.4□□□□□ -0.58
CAPN1-203ENST00000525013 Q8IZM0 81 aa11.4□□□□□ -0.58
CAPN1-203ENST00000525013 SMCO4Q9NRQ5 59 aa11.4□□□□□ -0.58
CAPN1-203ENST00000525013 CARHSP1Q9Y2V2 147 aaKnown RBP11.4□□□□□ -0.58
CAPN1-203ENST00000525013 LINC00469Q8N7U9 141 aa11.39□□□□□ -0.59
CAPN1-203ENST00000525013 TNXBP22105 4242 aa11.39□□□□□ -0.59
CAPN1-203ENST00000525013 LINC01549A6NIU2 74 aa11.38□□□□□ -0.59
CAPN1-203ENST00000525013 LINC01546A6NGU7 62 aa11.37□□□□□ -0.59
CAPN1-203ENST00000525013 M0QXV9 152 aa11.37□□□□□ -0.59
CAPN1-203ENST00000525013 C9orf129Q5T035 196 aaKnown RBP11.37□□□□□ -0.59
CAPN1-203ENST00000525013 UBE2BP63146 152 aa11.36□□□□□ -0.59
CAPN1-203ENST00000525013 KRTAP11-1Q8IUC1 163 aa11.36□□□□□ -0.59
CAPN1-203ENST00000525013 KRTAP7-1Q8IUC3 87 aa11.36□□□□□ -0.59
CAPN1-203ENST00000525013 CST9LQ9H4G1 147 aa11.36□□□□□ -0.59
CAPN1-203ENST00000525013 TINCRA0A1B0GVN0 87 aa11.35□□□□□ -0.59
CAPN1-203ENST00000525013 IGLV7-43P04211 117 aa11.35□□□□□ -0.59
CAPN1-203ENST00000525013 KRTAP10-8P60410 259 aa11.35□□□□□ -0.59
CAPN1-203ENST00000525013 ODF1Q14990 250 aa11.35□□□□□ -0.59
CAPN1-203ENST00000525013 F8VRH5 84 aa11.34□□□□□ -0.59
CAPN1-203ENST00000525013 PMVKQ15126 192 aa11.33□□□□□ -0.6
CAPN1-203ENST00000525013 DIRC1Q969H9 104 aa11.33□□□□□ -0.6
CAPN1-203ENST00000525013 XAGE1AQ9HD64 81 aa11.33□□□□□ -0.6
CAPN1-203ENST00000525013 TRAPPC1Q9Y5R8 145 aa11.33□□□□□ -0.6
CAPN1-203ENST00000525013 SMIM1B2RUZ4 78 aa11.32□□□□□ -0.6
CAPN1-203ENST00000525013 APOC3P02656 99 aa11.32□□□□□ -0.6
CAPN1-203ENST00000525013 CXCL5P42830 114 aa11.32□□□□□ -0.6
CAPN1-203ENST00000525013 PDZD11Q5EBL8 140 aa11.32□□□□□ -0.6
CAPN1-203ENST00000525013 SPINK8P0C7L1 97 aa11.31□□□□□ -0.6
CAPN1-203ENST00000525013 NDUFA6P56556 154 aa11.31□□□□□ -0.6
CAPN1-203ENST00000525013 COX7B2Q8TF08 81 aa11.31□□□□□ -0.6
CAPN1-203ENST00000525013 IGLV5-45A0A087WSX0 123 aa11.3□□□□□ -0.6
CAPN1-203ENST00000525013 UBR4Q5T4S7 5183 aa11.29□□□□□ -0.6
CAPN1-203ENST00000525013 NDUFA5Q16718 116 aa11.29□□□□□ -0.6
CAPN1-203ENST00000525013 H3BRM9 83 aa11.28□□□□□ -0.6
CAPN1-203ENST00000525013 SNAPINO95295 136 aa11.28□□□□□ -0.6
CAPN1-203ENST00000525013 LINC00614P0C842 121 aa11.28□□□□□ -0.6
CAPN1-203ENST00000525013 C18orf32Q8TCD1 76 aa11.28□□□□□ -0.6
CAPN1-203ENST00000525013 C22orf24Q9Y442 160 aa11.28□□□□□ -0.6
CAPN1-203ENST00000525013 H0Y9J4 135 aa11.27□□□□□ -0.61
CAPN1-203ENST00000525013 SVBPQ8N300 66 aa11.27□□□□□ -0.61
CAPN1-203ENST00000525013 LBHQ53QV2 105 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-203ENST00000525013 A0A096LNJ9 63 aa11.25□□□□□ -0.61
CAPN1-203ENST00000525013 HBDP02042 147 aa11.25□□□□□ -0.61
CAPN1-203ENST00000525013 RAB5BP61020 215 aa11.25□□□□□ -0.61
CAPN1-203ENST00000525013 PMCHL1Q16048 86 aa11.25□□□□□ -0.61
CAPN1-203ENST00000525013 URB1-AS1Q96HZ7 61 aa11.25□□□□□ -0.61
CAPN1-203ENST00000525013 IGLC3P0DOY3 106 aa11.23□□□□□ -0.61
CAPN1-203ENST00000525013 PRR26Q8N8Z3 221 aa11.23□□□□□ -0.61
CAPN1-203ENST00000525013 MRPL55Q7Z7F7 128 aaKnown RBP11.22□□□□□ -0.61
CAPN1-203ENST00000525013 ATP5LO75964 103 aa11.21□□□□□ -0.61
CAPN1-203ENST00000525013 TP73-AS1Q9UF72 201 aa11.21□□□□□ -0.61
CAPN1-203ENST00000525013 ZNF22P17026 224 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-203ENST00000525013 NUPR1O60356 82 aa11.19□□□□□ -0.62
CAPN1-203ENST00000525013 BAGE3Q86Y29 109 aa11.19□□□□□ -0.62
CAPN1-203ENST00000525013 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
CAPN1-203ENST00000525013 ZNF861PO60384 105 aa11.18□□□□□ -0.62
CAPN1-203ENST00000525013 GAGE10A6NGK3 116 aa11.17□□□□□ -0.62
CAPN1-203ENST00000525013 RPL37AP8A6NKH3 93 aa11.17□□□□□ -0.62
CAPN1-203ENST00000525013 PFN2P35080 140 aa11.17□□□□□ -0.62
CAPN1-203ENST00000525013 LINC00167Q96N53 147 aa11.17□□□□□ -0.62
CAPN1-203ENST00000525013 IGLV1-50A0A075B6I6 118 aa11.16□□□□□ -0.62
CAPN1-203ENST00000525013 C11orf86A6NJI1 115 aa11.16□□□□□ -0.62
CAPN1-203ENST00000525013 KRTAP1-4P0C5Y4 121 aa11.16□□□□□ -0.62
CAPN1-203ENST00000525013 TMEM170BQ5T4T1 132 aa11.16□□□□□ -0.62
CAPN1-203ENST00000525013 NKAPP1Q8N9T2 125 aa11.16□□□□□ -0.62
CAPN1-203ENST00000525013 YPEL4Q96NS1 127 aa11.15□□□□□ -0.62
CAPN1-203ENST00000525013 LRP2P98164 4655 aa11.15□□□□□ -0.62
CAPN1-203ENST00000525013 BCE1O60756 84 aa11.13□□□□□ -0.63
CAPN1-203ENST00000525013 CHCHD1Q96BP2 118 aaKnown RBP11.13□□□□□ -0.63
CAPN1-203ENST00000525013 ZNF625Q96I27 306 aaPredicted RBP11.13□□□□□ -0.63
CAPN1-203ENST00000525013 ERG28Q9UKR5 140 aa11.13□□□□□ -0.63
CAPN1-203ENST00000525013 CHTOPQ9Y3Y2 248 aaKnown RBP11.13□□□□□ -0.63
CAPN1-203ENST00000525013 IGLV5-37A0A075B6J1 123 aa11.12□□□□□ -0.63
CAPN1-203ENST00000525013 RPL28P46779 137 aaKnown RBP11.12□□□□□ -0.63
CAPN1-203ENST00000525013 RPL13AP40429 203 aaKnown RBP11.11□□□□□ -0.63
CAPN1-203ENST00000525013 CBLN2Q8IUK8 224 aa11.11□□□□□ -0.63
CAPN1-203ENST00000525013 SCO1O75880 301 aa11.1□□□□□ -0.63
CAPN1-203ENST00000525013 IFI27L1Q96BM0 104 aa11.1□□□□□ -0.63
CAPN1-203ENST00000525013 SND1-IT1Q9HBX3 110 aa11.1□□□□□ -0.63
CAPN1-203ENST00000525013 COX17Q14061 63 aa11.09□□□□□ -0.63
CAPN1-203ENST00000525013 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
CAPN1-203ENST00000525013 IGKV2-28A0A075B6P5 120 aa11.07□□□□□ -0.64
CAPN1-203ENST00000525013 HSBP1O75506 76 aa11.07□□□□□ -0.64
CAPN1-203ENST00000525013 IGKV2D-28P01615 120 aa11.07□□□□□ -0.64
CAPN1-203ENST00000525013 UBE2AP49459 152 aa11.07□□□□□ -0.64
CAPN1-203ENST00000525013 TRAV12-1A0A0B4J245 112 aa11.06□□□□□ -0.64
CAPN1-203ENST00000525013 FAM19A2Q8N3H0 131 aa11.06□□□□□ -0.64
CAPN1-203ENST00000525013 TMEM223A0PJW6 202 aa11.05□□□□□ -0.64
CAPN1-203ENST00000525013 VPREB1P12018 145 aa11.05□□□□□ -0.64
CAPN1-203ENST00000525013 LINC00158P58513 81 aa11.05□□□□□ -0.64
CAPN1-203ENST00000525013 RPL24P83731 157 aaKnown RBP11.05□□□□□ -0.64
CAPN1-203ENST00000525013 TRGC2P03986 189 aa11.04□□□□□ -0.64
CAPN1-203ENST00000525013 A0A0U1RRA0 63 aa11.03□□□□□ -0.64
CAPN1-203ENST00000525013 H0Y8G0 127 aa11.02□□□□□ -0.65
CAPN1-203ENST00000525013 SLC7A5P1Q8MH63 180 aa11.01□□□□□ -0.65
CAPN1-203ENST00000525013 TMEM238C9JI98 176 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms