RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 HNRNPA3P51991 378 aaKnown RBP14.11□□□□□ -0.15
HDAC2-214ENST00000523240 GAGE2EQ4V326 116 aa14.11□□□□□ -0.15
HDAC2-214ENST00000523240 YPEL4Q96NS1 127 aa14.11□□□□□ -0.15
HDAC2-214ENST00000523240 GAGE2DQ9UEU5 116 aa14.11□□□□□ -0.15
HDAC2-214ENST00000523240 MYCBP2O75592 4640 aa14.1□□□□□ -0.15
HDAC2-214ENST00000523240 PMCHL1Q16048 86 aa14.1□□□□□ -0.15
HDAC2-214ENST00000523240 URB1-AS1Q96HZ7 61 aa14.1□□□□□ -0.15
HDAC2-214ENST00000523240 A0A1W2PNN7 141 aa14.09□□□□□ -0.15
HDAC2-214ENST00000523240 PRR3P79522 188 aaKnown RBP14.09□□□□□ -0.15
HDAC2-214ENST00000523240 Q6ZRP5 223 aa14.09□□□□□ -0.15
HDAC2-214ENST00000523240 A0A096LNJ9 63 aa14.08□□□□□ -0.16
HDAC2-214ENST00000523240 NDUFC2-KCTD14E9PQ53 114 aa14.07□□□□□ -0.16
HDAC2-214ENST00000523240 H3BRM9 83 aa14.07□□□□□ -0.16
HDAC2-214ENST00000523240 ATP5LO75964 103 aa14.07□□□□□ -0.16
HDAC2-214ENST00000523240 OXTP01178 125 aa14.07□□□□□ -0.16
HDAC2-214ENST00000523240 SMIM1B2RUZ4 78 aa14.06□□□□□ -0.16
HDAC2-214ENST00000523240 CXCL5P42830 114 aa14.06□□□□□ -0.16
HDAC2-214ENST00000523240 PDZD11Q5EBL8 140 aa14.06□□□□□ -0.16
HDAC2-214ENST00000523240 IGLV5-45A0A087WSX0 123 aa14.05□□□□□ -0.16
HDAC2-214ENST00000523240 F8VRH5 84 aa14.04□□□□□ -0.16
HDAC2-214ENST00000523240 SPINK8P0C7L1 97 aa14.04□□□□□ -0.16
HDAC2-214ENST00000523240 FAM19A5Q7Z5A7 132 aaPredicted RBP14.04□□□□□ -0.16
HDAC2-214ENST00000523240 COX7B2Q8TF08 81 aa14.04□□□□□ -0.16
HDAC2-214ENST00000523240 CHCHD1Q96BP2 118 aaKnown RBP14.04□□□□□ -0.16
HDAC2-214ENST00000523240 PHF5AQ7RTV0 110 aaKnown RBP14.02□□□□□ -0.17
HDAC2-214ENST00000523240 BAGE3Q86Y29 109 aa14.02□□□□□ -0.17
HDAC2-214ENST00000523240 FAM168BA1KXE4 195 aa14.01□□□□□ -0.17
HDAC2-214ENST00000523240 IGLC3P0DOY3 106 aa14.01□□□□□ -0.17
HDAC2-214ENST00000523240 HSBP1O75506 76 aa13.99□□□□□ -0.17
HDAC2-214ENST00000523240 TRGC2P03986 189 aa13.99□□□□□ -0.17
HDAC2-214ENST00000523240 M0QXV9 152 aa13.97□□□□□ -0.17
HDAC2-214ENST00000523240 ZNF22P17026 224 aaPredicted RBP13.96□□□□□ -0.17
HDAC2-214ENST00000523240 C9orf129Q5T035 196 aaKnown RBP13.96□□□□□ -0.17
HDAC2-214ENST00000523240 PKHD1L1Q86WI1 4243 aa13.95□□□□□ -0.18
HDAC2-214ENST00000523240 UBE2BP63146 152 aa13.95□□□□□ -0.18
HDAC2-214ENST00000523240 TMEM170BQ5T4T1 132 aa13.95□□□□□ -0.18
HDAC2-214ENST00000523240 IFI27L1Q96BM0 104 aa13.95□□□□□ -0.18
HDAC2-214ENST00000523240 PSORS1C2Q9UIG4 136 aa13.95□□□□□ -0.18
HDAC2-214ENST00000523240 CHTOPQ9Y3Y2 248 aaKnown RBP13.95□□□□□ -0.18
HDAC2-214ENST00000523240 C1orf137Q5JT78 98 aa13.94□□□□□ -0.18
HDAC2-214ENST00000523240 SPINK6Q6UWN8 80 aa13.94□□□□□ -0.18
HDAC2-214ENST00000523240 XAGE1AQ9HD64 81 aa13.94□□□□□ -0.18
HDAC2-214ENST00000523240 C11orf86A6NJI1 115 aa13.92□□□□□ -0.18
HDAC2-214ENST00000523240 FAM19A2Q8N3H0 131 aa13.92□□□□□ -0.18
HDAC2-214ENST00000523240 IGLV5-39A0A0G2JS06 123 aa13.9□□□□□ -0.18
HDAC2-214ENST00000523240 REG3GQ6UW15 175 aa13.9□□□□□ -0.18
HDAC2-214ENST00000523240 TRAV12-1A0A0B4J245 112 aa13.89□□□□□ -0.19
HDAC2-214ENST00000523240 LRP1Q07954 4544 aaKnown RBP13.89□□□□□ -0.19
HDAC2-214ENST00000523240 COLCA2A8K830 154 aa13.88□□□□□ -0.19
HDAC2-214ENST00000523240 SERF1AO75920 110 aa13.88□□□□□ -0.19
HDAC2-214ENST00000523240 KRTAP7-1Q8IUC3 87 aa13.88□□□□□ -0.19
HDAC2-214ENST00000523240 HERC1Q15751 4861 aa13.86□□□□□ -0.19
HDAC2-214ENST00000523240 H0Y8G0 127 aa13.86□□□□□ -0.19
HDAC2-214ENST00000523240 LEPROTL1O95214 131 aa13.86□□□□□ -0.19
HDAC2-214ENST00000523240 SERTAD4-AS1Q5TG53 156 aa13.86□□□□□ -0.19
HDAC2-214ENST00000523240 PFN2P35080 140 aa13.85□□□□□ -0.19
HDAC2-214ENST00000523240 SRSF9Q13242 221 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDAC2-214ENST00000523240 LBHQ53QV2 105 aaPredicted RBP13.85□□□□□ -0.19
HDAC2-214ENST00000523240 SFTA2Q6UW10 78 aa13.84□□□□□ -0.19
HDAC2-214ENST00000523240 C22orf24Q9Y442 160 aa13.84□□□□□ -0.19
HDAC2-214ENST00000523240 FAT3Q8TDW7 4589 aa13.84□□□□□ -0.19
HDAC2-214ENST00000523240 IGLV7-43P04211 117 aa13.83□□□□□ -0.2
HDAC2-214ENST00000523240 KRTAP11-1Q8IUC1 163 aa13.82□□□□□ -0.2
HDAC2-214ENST00000523240 HSPB8Q9UJY1 196 aa13.82□□□□□ -0.2
HDAC2-214ENST00000523240 ERG28Q9UKR5 140 aa13.82□□□□□ -0.2
HDAC2-214ENST00000523240 SCO1O75880 301 aa13.81□□□□□ -0.2
HDAC2-214ENST00000523240 ZNF625Q96I27 306 aaPredicted RBP13.81□□□□□ -0.2
HDAC2-214ENST00000523240 LINC00310P59036 64 aa13.8□□□□□ -0.2
HDAC2-214ENST00000523240 MRPL55Q7Z7F7 128 aaKnown RBP13.8□□□□□ -0.2
HDAC2-214ENST00000523240 LINC01600Q96MT4 127 aa13.8□□□□□ -0.2
HDAC2-214ENST00000523240 TP73-AS1Q9UF72 201 aa13.8□□□□□ -0.2
HDAC2-214ENST00000523240 TMEM223A0PJW6 202 aa13.79□□□□□ -0.2
HDAC2-214ENST00000523240 MT1HL1P0DM35 61 aa13.79□□□□□ -0.2
HDAC2-214ENST00000523240 FABP4P15090 132 aa13.79□□□□□ -0.2
HDAC2-214ENST00000523240 NKAPP1Q8N9T2 125 aa13.79□□□□□ -0.2
HDAC2-214ENST00000523240 DIRC1Q969H9 104 aa13.79□□□□□ -0.2
HDAC2-214ENST00000523240 COX17Q14061 63 aa13.78□□□□□ -0.2
HDAC2-214ENST00000523240 PLA2G2DQ9UNK4 145 aa13.78□□□□□ -0.2
HDAC2-214ENST00000523240 ODF1Q14990 250 aa13.77□□□□□ -0.21
HDAC2-214ENST00000523240 NUPR1O60356 82 aa13.76□□□□□ -0.21
HDAC2-214ENST00000523240 GAGE10A6NGK3 116 aa13.74□□□□□ -0.21
HDAC2-214ENST00000523240 SND1-IT1Q9HBX3 110 aa13.74□□□□□ -0.21
HDAC2-214ENST00000523240 PLNP26678 52 aa13.73□□□□□ -0.21
HDAC2-214ENST00000523240 LINC00158P58513 81 aa13.73□□□□□ -0.21
HDAC2-214ENST00000523240 H0Y9J4 135 aa13.72□□□□□ -0.21
HDAC2-214ENST00000523240 ATP6V1G1O75348 118 aa13.72□□□□□ -0.21
HDAC2-214ENST00000523240 LINC00167Q96N53 147 aa13.72□□□□□ -0.21
HDAC2-214ENST00000523240 IGLV5-37A0A075B6J1 123 aa13.71□□□□□ -0.21
HDAC2-214ENST00000523240 RPL37AP8A6NKH3 93 aa13.71□□□□□ -0.21
HDAC2-214ENST00000523240 MEIG1Q5JSS6 88 aa13.71□□□□□ -0.21
HDAC2-214ENST00000523240 MAP1LC3CQ9BXW4 147 aa13.71□□□□□ -0.21
HDAC2-214ENST00000523240 A0A0U1RRA0 63 aa13.7□□□□□ -0.22
HDAC2-214ENST00000523240 HIST1H2BKO60814 126 aa13.7□□□□□ -0.22
HDAC2-214ENST00000523240 DPM2O94777 84 aa13.7□□□□□ -0.22
HDAC2-214ENST00000523240 HIST1H2BJP06899 126 aa13.7□□□□□ -0.22
HDAC2-214ENST00000523240 HIST1H2BOP23527 126 aa13.7□□□□□ -0.22
HDAC2-214ENST00000523240 HIST1H2BBP33778 126 aa13.7□□□□□ -0.22
HDAC2-214ENST00000523240 HIST1H2BDP58876 126 aa13.7□□□□□ -0.22
HDAC2-214ENST00000523240 HIST1H2BCP62807 126 aa13.7□□□□□ -0.22
HDAC2-214ENST00000523240 RPL24P83731 157 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms