RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 C14orf132Q9NPU4 83 aa11.5□□□□□ -0.57
PCDHGA11-202ENST00000518882 LECT2O14960 151 aa11.49□□□□□ -0.57
PCDHGA11-202ENST00000518882 XCL1P47992 114 aa11.49□□□□□ -0.57
PCDHGA11-202ENST00000518882 TENM4Q6N022 2769 aa11.49□□□□□ -0.57
PCDHGA11-202ENST00000518882 PDZD2O15018 2839 aa11.49□□□□□ -0.57
PCDHGA11-202ENST00000518882 H0YGX0 51 aa11.49□□□□□ -0.57
PCDHGA11-202ENST00000518882 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
PCDHGA11-202ENST00000518882 OR13C6PQ8NH95 151 aa11.49□□□□□ -0.57
PCDHGA11-202ENST00000518882 C16orf95Q9H693 158 aa11.49□□□□□ -0.57
PCDHGA11-202ENST00000518882 KRTAP1-1Q07627 177 aa11.48□□□□□ -0.57
PCDHGA11-202ENST00000518882 CLPSL2Q6UWE3 100 aa11.48□□□□□ -0.57
PCDHGA11-202ENST00000518882 SLPIP03973 132 aa11.47□□□□□ -0.57
PCDHGA11-202ENST00000518882 RNASE1P07998 156 aaKnown RBP11.47□□□□□ -0.57
PCDHGA11-202ENST00000518882 GYPEP15421 78 aa11.47□□□□□ -0.57
PCDHGA11-202ENST00000518882 OBSCN-AS1Q96MR7 158 aa11.47□□□□□ -0.57
PCDHGA11-202ENST00000518882 CXCL5P42830 114 aa11.46□□□□□ -0.58
PCDHGA11-202ENST00000518882 A0A096LPF7 62 aa11.45□□□□□ -0.58
PCDHGA11-202ENST00000518882 NCR3O14931 201 aa11.45□□□□□ -0.58
PCDHGA11-202ENST00000518882 LY6G6DO95868 133 aa11.45□□□□□ -0.58
PCDHGA11-202ENST00000518882 SMIM20Q8N5G0 67 aa11.44□□□□□ -0.58
PCDHGA11-202ENST00000518882 LINC00612Q8N6U2 182 aa11.44□□□□□ -0.58
PCDHGA11-202ENST00000518882 KIR2DL5BQ8NHK3 375 aa11.44□□□□□ -0.58
PCDHGA11-202ENST00000518882 KLK5Q9Y337 293 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA11-202ENST00000518882 ITPR2Q14571 2701 aa11.44□□□□□ -0.58
PCDHGA11-202ENST00000518882 PRR3P79522 188 aaKnown RBP11.43□□□□□ -0.58
PCDHGA11-202ENST00000518882 SS18Q15532 418 aa11.43□□□□□ -0.58
PCDHGA11-202ENST00000518882 Q8IZM0 81 aa11.43□□□□□ -0.58
PCDHGA11-202ENST00000518882 A0A1B0GUV1 79 aa11.43□□□□□ -0.58
PCDHGA11-202ENST00000518882 LINC00846Q9NV44 126 aa11.43□□□□□ -0.58
PCDHGA11-202ENST00000518882 VWFP04275 2813 aa11.43□□□□□ -0.58
PCDHGA11-202ENST00000518882 NANOS2P60321 138 aaKnown RBP11.41□□□□□ -0.58
PCDHGA11-202ENST00000518882 C3orf22Q8N5N4 141 aa11.41□□□□□ -0.58
PCDHGA11-202ENST00000518882 X6R8D5 127 aa11.41□□□□□ -0.58
PCDHGA11-202ENST00000518882 HIST1H4AP62805 103 aaKnown RBP11.39□□□□□ -0.59
PCDHGA11-202ENST00000518882 Q8N3U1 123 aa11.39□□□□□ -0.59
PCDHGA11-202ENST00000518882 IGKV3D-7A0A0C4DH55 119 aa11.39□□□□□ -0.59
PCDHGA11-202ENST00000518882 C9orf153Q5TBE3 101 aa11.39□□□□□ -0.59
PCDHGA11-202ENST00000518882 KRTAP10-3P60369 221 aa11.38□□□□□ -0.59
PCDHGA11-202ENST00000518882 KIAA0087Q14695 138 aa11.38□□□□□ -0.59
PCDHGA11-202ENST00000518882 ORMDL1Q9P0S3 153 aa11.38□□□□□ -0.59
PCDHGA11-202ENST00000518882 PRO0255Q9UI72 69 aa11.38□□□□□ -0.59
PCDHGA11-202ENST00000518882 UQCRQO14949 82 aa11.38□□□□□ -0.59
PCDHGA11-202ENST00000518882 LINC00269Q8N2A0 174 aa11.38□□□□□ -0.59
PCDHGA11-202ENST00000518882 TMEM126AQ9H061 195 aa11.38□□□□□ -0.59
PCDHGA11-202ENST00000518882 LINC01561Q8N1V8 128 aa11.37□□□□□ -0.59
PCDHGA11-202ENST00000518882 C2orf48Q96LS8 159 aa11.37□□□□□ -0.59
PCDHGA11-202ENST00000518882 IGLV10-54A0A075B6I4 117 aa11.36□□□□□ -0.59
PCDHGA11-202ENST00000518882 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
PCDHGA11-202ENST00000518882 LINC00526Q96FQ7 95 aa11.36□□□□□ -0.59
PCDHGA11-202ENST00000518882 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
PCDHGA11-202ENST00000518882 Q6JHZ5 121 aa11.35□□□□□ -0.59
PCDHGA11-202ENST00000518882 Q8NDZ9 215 aa11.35□□□□□ -0.59
PCDHGA11-202ENST00000518882 DEFB4AO15263 64 aa11.34□□□□□ -0.59
PCDHGA11-202ENST00000518882 HILS1P60008 231 aa11.34□□□□□ -0.59
PCDHGA11-202ENST00000518882 Q8N814 137 aa11.34□□□□□ -0.59
PCDHGA11-202ENST00000518882 A0A087WVE0 104 aa11.34□□□□□ -0.59
PCDHGA11-202ENST00000518882 COX7CP15954 63 aa11.34□□□□□ -0.59
PCDHGA11-202ENST00000518882 CD164L2Q6UWJ8 174 aa11.34□□□□□ -0.59
PCDHGA11-202ENST00000518882 CHCHD10Q8WYQ3 142 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA11-202ENST00000518882 LINC00482Q8N8I6 264 aa11.33□□□□□ -0.6
PCDHGA11-202ENST00000518882 SPATA3Q8NHX4 192 aa11.33□□□□□ -0.6
PCDHGA11-202ENST00000518882 ATOX1O00244 68 aa11.32□□□□□ -0.6
PCDHGA11-202ENST00000518882 NDUFC2O95298 119 aa11.32□□□□□ -0.6
PCDHGA11-202ENST00000518882 ANGP03950 147 aaKnown RBP11.32□□□□□ -0.6
PCDHGA11-202ENST00000518882 CCKP06307 115 aa11.32□□□□□ -0.6
PCDHGA11-202ENST00000518882 CFAP161Q6P656 301 aa11.32□□□□□ -0.6
PCDHGA11-202ENST00000518882 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
PCDHGA11-202ENST00000518882 REG3AQ06141 175 aa11.3□□□□□ -0.6
PCDHGA11-202ENST00000518882 COX17Q14061 63 aa11.3□□□□□ -0.6
PCDHGA11-202ENST00000518882 SMIM9A6NGZ8 99 aa11.3□□□□□ -0.6
PCDHGA11-202ENST00000518882 IGHV4-28A0A0C4DH34 117 aa11.29□□□□□ -0.6
PCDHGA11-202ENST00000518882 A0A1B0GX51 115 aa11.29□□□□□ -0.6
PCDHGA11-202ENST00000518882 DEFB135Q30KP9 77 aa11.29□□□□□ -0.6
PCDHGA11-202ENST00000518882 HIVEP2P31629 2446 aa11.29□□□□□ -0.6
PCDHGA11-202ENST00000518882 SMR3AQ99954 134 aa11.28□□□□□ -0.6
PCDHGA11-202ENST00000518882 LYRM9A8MSI8 78 aa11.28□□□□□ -0.6
PCDHGA11-202ENST00000518882 C6orf99Q4VX62 202 aa11.28□□□□□ -0.6
PCDHGA11-202ENST00000518882 CYSTM1Q9H1C7 97 aa11.28□□□□□ -0.6
PCDHGA11-202ENST00000518882 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
PCDHGA11-202ENST00000518882 C6orf223Q8N319 242 aa11.27□□□□□ -0.61
PCDHGA11-202ENST00000518882 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
PCDHGA11-202ENST00000518882 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
PCDHGA11-202ENST00000518882 CRYGAP11844 174 aa11.26□□□□□ -0.61
PCDHGA11-202ENST00000518882 TENM1Q9UKZ4 2725 aa11.26□□□□□ -0.61
PCDHGA11-202ENST00000518882 UNC79Q9P2D8 2635 aa11.26□□□□□ -0.61
PCDHGA11-202ENST00000518882 hADV29S1A0JD25 119 aa11.25□□□□□ -0.61
PCDHGA11-202ENST00000518882 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
PCDHGA11-202ENST00000518882 CELA1Q9UNI1 258 aa11.24□□□□□ -0.61
PCDHGA11-202ENST00000518882 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
PCDHGA11-202ENST00000518882 WFDC9Q8NEX5 89 aa11.23□□□□□ -0.61
PCDHGA11-202ENST00000518882 DAD1P61803 113 aa11.23□□□□□ -0.61
PCDHGA11-202ENST00000518882 S100A7L2Q5SY68 101 aa11.23□□□□□ -0.61
PCDHGA11-202ENST00000518882 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
PCDHGA11-202ENST00000518882 LINC00575Q6W349 94 aa11.22□□□□□ -0.61
PCDHGA11-202ENST00000518882 HELZ2Q9BYK8 2649 aaKnown RBP11.21□□□□□ -0.61
PCDHGA11-202ENST00000518882 SPAG11BQ08648 103 aa11.21□□□□□ -0.62
PCDHGA11-202ENST00000518882 SERP2Q8N6R1 65 aa11.21□□□□□ -0.62
PCDHGA11-202ENST00000518882 UPK3BQ9BT76 320 aa11.2□□□□□ -0.62
PCDHGA11-202ENST00000518882 CYSRT1A8MQ03 144 aa11.19□□□□□ -0.62
PCDHGA11-202ENST00000518882 HIVEP1P15822 2718 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms