RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 SCGB3A1Q96QR1 104 aa3.73□□□□□ -1.81
SCARNA18.1-201ENST00000516330 LRP1Q07954 4544 aaKnown RBP3.73□□□□□ -1.81
SCARNA18.1-201ENST00000516330 A0A1W2PNN7 141 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 H3BRM9 83 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 M0QXV9 152 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 ATP5LO75964 103 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 APOC3P02656 99 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 FABP9Q0Z7S8 132 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 C6orf226Q5I0X4 101 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 UNQ6190/PRO20217Q6UXQ8 127 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 LINC00469Q8N7U9 141 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 C18orf32Q8TCD1 76 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 LINC01600Q96MT4 127 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 TP73-AS1Q9UF72 201 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 CDKN2A-AS1Q9UH64 79 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 TRAPPC1Q9Y5R8 145 aa3.72□□□□□ -1.81
SCARNA18.1-201ENST00000516330 LINC00614P0C842 121 aa3.71□□□□□ -1.82
SCARNA18.1-201ENST00000516330 MT1HL1P0DM35 61 aa3.71□□□□□ -1.82
SCARNA18.1-201ENST00000516330 IGLC3P0DOY3 106 aa3.71□□□□□ -1.82
SCARNA18.1-201ENST00000516330 C10orf25Q5T742 122 aa3.71□□□□□ -1.82
SCARNA18.1-201ENST00000516330 TOMM7Q9P0U1 55 aa3.71□□□□□ -1.82
SCARNA18.1-201ENST00000516330 PSORS1C2Q9UIG4 136 aa3.71□□□□□ -1.82
SCARNA18.1-201ENST00000516330 A0A096LNJ9 63 aa3.7□□□□□ -1.82
SCARNA18.1-201ENST00000516330 NUPR1O60356 82 aa3.7□□□□□ -1.82
SCARNA18.1-201ENST00000516330 SRSF9Q13242 221 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCARNA18.1-201ENST00000516330 C2orf82Q6UX34 121 aa3.7□□□□□ -1.82
SCARNA18.1-201ENST00000516330 DIRC1Q969H9 104 aa3.7□□□□□ -1.82
SCARNA18.1-201ENST00000516330 CHCHD1Q96BP2 118 aaKnown RBP3.7□□□□□ -1.82
SCARNA18.1-201ENST00000516330 CST9LQ9H4G1 147 aa3.7□□□□□ -1.82
SCARNA18.1-201ENST00000516330 HMCN2Q8NDA2 5059 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 IGLV5-39A0A0G2JS06 123 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 IGLV7-43P04211 117 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 UBE2BP63146 152 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 COX17Q14061 63 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 GAGE2EQ4V326 116 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 LBHQ53QV2 105 aaPredicted RBP3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 C1orf137Q5JT78 98 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 C9orf129Q5T035 196 aaKnown RBP3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 PHF5AQ7RTV0 110 aaKnown RBP3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 FAM19A5Q7Z5A7 132 aaPredicted RBP3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 COX7B2Q8TF08 81 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 YPEL4Q96NS1 127 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 GAGE2DQ9UEU5 116 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 PLA2G2DQ9UNK4 145 aa3.69□□□□□ -1.82
SCARNA18.1-201ENST00000516330 IGLV5-37A0A075B6J1 123 aa3.68□□□□□ -1.82
SCARNA18.1-201ENST00000516330 TRAV12-1A0A0B4J245 112 aa3.68□□□□□ -1.82
SCARNA18.1-201ENST00000516330 H0Y9J4 135 aa3.68□□□□□ -1.82
SCARNA18.1-201ENST00000516330 ZNF22P17026 224 aaPredicted RBP3.68□□□□□ -1.82
SCARNA18.1-201ENST00000516330 ZC2HC1BQ5TFG8 222 aa3.68□□□□□ -1.82
SCARNA18.1-201ENST00000516330 URB1-AS1Q96HZ7 61 aa3.68□□□□□ -1.82
SCARNA18.1-201ENST00000516330 IGLV1-50A0A075B6I6 118 aa3.67□□□□□ -1.82
SCARNA18.1-201ENST00000516330 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
SCARNA18.1-201ENST00000516330 HSBP1O75506 76 aa3.67□□□□□ -1.82
SCARNA18.1-201ENST00000516330 RPL13AP40429 203 aaKnown RBP3.67□□□□□ -1.82
SCARNA18.1-201ENST00000516330 MRPL55Q7Z7F7 128 aaKnown RBP3.67□□□□□ -1.82
SCARNA18.1-201ENST00000516330 SPINK8P0C7L1 97 aa3.66□□□□□ -1.82
SCARNA18.1-201ENST00000516330 KRTAP7-1Q8IUC3 87 aa3.66□□□□□ -1.82
SCARNA18.1-201ENST00000516330 TNXBP22105 4242 aa3.65□□□□□ -1.82
SCARNA18.1-201ENST00000516330 C11orf86A6NJI1 115 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 LINC00587B1AMM8 73 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 ZNF861PO60384 105 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 RPL28P46779 137 aaKnown RBP3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 KRTAP10-8P60410 259 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 TMEM170BQ5T4T1 132 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 BAGE3Q86Y29 109 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 NKAPP1Q8N9T2 125 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 IFI27L1Q96BM0 104 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 XAGE1AQ9HD64 81 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 ERG28Q9UKR5 140 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 CHTOPQ9Y3Y2 248 aaKnown RBP3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 C22orf24Q9Y442 160 aa3.65□□□□□ -1.83
SCARNA18.1-201ENST00000516330 BCE1O60756 84 aa3.64□□□□□ -1.83
SCARNA18.1-201ENST00000516330 PLNP26678 52 aa3.64□□□□□ -1.83
SCARNA18.1-201ENST00000516330 NDUFA6P56556 154 aa3.64□□□□□ -1.83
SCARNA18.1-201ENST00000516330 HERV-K104P63124 156 aa3.64□□□□□ -1.83
SCARNA18.1-201ENST00000516330 RPL24P83731 157 aaKnown RBP3.64□□□□□ -1.83
SCARNA18.1-201ENST00000516330 PMCHL1Q16048 86 aa3.64□□□□□ -1.83
SCARNA18.1-201ENST00000516330 CBLN2Q8IUK8 224 aa3.64□□□□□ -1.83
SCARNA18.1-201ENST00000516330 ZNF625Q96I27 306 aaPredicted RBP3.64□□□□□ -1.83
SCARNA18.1-201ENST00000516330 TMEM223A0PJW6 202 aa3.63□□□□□ -1.83
SCARNA18.1-201ENST00000516330 LEPROTL1O95214 131 aa3.63□□□□□ -1.83
SCARNA18.1-201ENST00000516330 KRTAP1-4P0C5Y4 121 aa3.63□□□□□ -1.83
SCARNA18.1-201ENST00000516330 HSPB8Q9UJY1 196 aa3.63□□□□□ -1.83
SCARNA18.1-201ENST00000516330 UBR4Q5T4S7 5183 aa3.62□□□□□ -1.83
SCARNA18.1-201ENST00000516330 IGKV2D-26A0A0A0MRZ7 120 aa3.62□□□□□ -1.83
SCARNA18.1-201ENST00000516330 TRGC2P03986 189 aa3.62□□□□□ -1.83
SCARNA18.1-201ENST00000516330 VPREB1P12018 145 aa3.62□□□□□ -1.83
SCARNA18.1-201ENST00000516330 HERVK_113P61574 105 aa3.62□□□□□ -1.83
SCARNA18.1-201ENST00000516330 CTAG1AP78358 180 aa3.62□□□□□ -1.83
SCARNA18.1-201ENST00000516330 KRTAP11-1Q8IUC1 163 aa3.62□□□□□ -1.83
SCARNA18.1-201ENST00000516330 MAP1LC3CQ9BXW4 147 aa3.62□□□□□ -1.83
SCARNA18.1-201ENST00000516330 SND1-IT1Q9HBX3 110 aa3.62□□□□□ -1.83
SCARNA18.1-201ENST00000516330 SERF1AO75920 110 aa3.61□□□□□ -1.83
SCARNA18.1-201ENST00000516330 PFN2P35080 140 aa3.61□□□□□ -1.83
SCARNA18.1-201ENST00000516330 NMUP48645 174 aa3.61□□□□□ -1.83
SCARNA18.1-201ENST00000516330 KRTAP13-1Q8IUC0 172 aa3.61□□□□□ -1.83
SCARNA18.1-201ENST00000516330 LINC00167Q96N53 147 aa3.61□□□□□ -1.83
SCARNA18.1-201ENST00000516330 MYMXA0A1B0GTQ4 84 aa3.6□□□□□ -1.83
SCARNA18.1-201ENST00000516330 UBE2AP49459 152 aa3.6□□□□□ -1.83
SCARNA18.1-201ENST00000516330 LINC00310P59036 64 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms