RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 ATMQ13315 3056 aa7.31□□□□□ -1.24
SMG7-215ENST00000515829 DEFB131BA0A096LNP1 70 aa7.31□□□□□ -1.24
SMG7-215ENST00000515829 C3orf22Q8N5N4 141 aa7.31□□□□□ -1.24
SMG7-215ENST00000515829 LINC00482Q8N8I6 264 aa7.31□□□□□ -1.24
SMG7-215ENST00000515829 ZFHX4Q86UP3 3567 aa7.3□□□□□ -1.24
SMG7-215ENST00000515829 BEAN1Q3B7T3 259 aa7.3□□□□□ -1.24
SMG7-215ENST00000515829 A0A087WYN8 130 aa7.3□□□□□ -1.24
SMG7-215ENST00000515829 MUC7Q8TAX7 377 aa7.3□□□□□ -1.24
SMG7-215ENST00000515829 BBC3Q96PG8 261 aaPredicted RBP7.3□□□□□ -1.24
SMG7-215ENST00000515829 PRR3P79522 188 aaKnown RBP7.3□□□□□ -1.24
SMG7-215ENST00000515829 LINC01006Q8NI28 216 aa7.3□□□□□ -1.24
SMG7-215ENST00000515829 DCHS1Q96JQ0 3298 aa7.3□□□□□ -1.24
SMG7-215ENST00000515829 LINC00959A0A1B0GUT2 108 aa7.3□□□□□ -1.24
SMG7-215ENST00000515829 FAM240AA0A1B0GVK7 77 aa7.3□□□□□ -1.24
SMG7-215ENST00000515829 MUC3AQ02505 3323 aa7.3□□□□□ -1.24
SMG7-215ENST00000515829 EIF4EBP3O60516 100 aaPredicted RBP7.29□□□□□ -1.24
SMG7-215ENST00000515829 INAFM1C9JVW0 142 aa7.29□□□□□ -1.24
SMG7-215ENST00000515829 C4orf48Q5BLP8 95 aa7.29□□□□□ -1.24
SMG7-215ENST00000515829 C6orf99Q4VX62 202 aa7.29□□□□□ -1.24
SMG7-215ENST00000515829 NTM-AS1Q6ZSK4 140 aa7.29□□□□□ -1.24
SMG7-215ENST00000515829 LITAFQ99732 161 aa7.29□□□□□ -1.24
SMG7-215ENST00000515829 WFDC9Q8NEX5 89 aa7.28□□□□□ -1.24
SMG7-215ENST00000515829 SOSTDC1Q6X4U4 206 aa7.28□□□□□ -1.24
SMG7-215ENST00000515829 DMXL1Q9Y485 3027 aa7.28□□□□□ -1.24
SMG7-215ENST00000515829 A0A087WVE0 104 aa7.28□□□□□ -1.24
SMG7-215ENST00000515829 M0QXV9 152 aa7.28□□□□□ -1.24
SMG7-215ENST00000515829 CD164L2Q6UWJ8 174 aa7.28□□□□□ -1.24
SMG7-215ENST00000515829 TNRC18O15417 2968 aaPredicted RBP7.28□□□□□ -1.24
SMG7-215ENST00000515829 IMUPQ9GZP8 106 aa7.28□□□□□ -1.24
SMG7-215ENST00000515829 ENHOQ6UWT2 76 aa7.27□□□□□ -1.25
SMG7-215ENST00000515829 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.27□□□□□ -1.25
SMG7-215ENST00000515829 TRAV10A0A0B4J240 114 aa7.27□□□□□ -1.25
SMG7-215ENST00000515829 LINC00337Q8N6G1 96 aa7.27□□□□□ -1.25
SMG7-215ENST00000515829 J3KT08 172 aa7.27□□□□□ -1.25
SMG7-215ENST00000515829 XAGE1AQ9HD64 81 aa7.26□□□□□ -1.25
SMG7-215ENST00000515829 BPY2O14599 106 aa7.26□□□□□ -1.25
SMG7-215ENST00000515829 RPL28P46779 137 aaKnown RBP7.26□□□□□ -1.25
SMG7-215ENST00000515829 IGLV5-39A0A0G2JS06 123 aa7.26□□□□□ -1.25
SMG7-215ENST00000515829 C9orf116Q5BN46 136 aaPredicted RBP7.26□□□□□ -1.25
SMG7-215ENST00000515829 LELP1Q5T871 98 aa7.26□□□□□ -1.25
SMG7-215ENST00000515829 LY6G6DO95868 133 aa7.26□□□□□ -1.25
SMG7-215ENST00000515829 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
SMG7-215ENST00000515829 CSDC2Q9Y534 153 aaKnown RBP7.25□□□□□ -1.25
SMG7-215ENST00000515829 FAM218AQ96MZ4 157 aa7.25□□□□□ -1.25
SMG7-215ENST00000515829 CHKB-CPT1BH3BT56 60 aa7.25□□□□□ -1.25
SMG7-215ENST00000515829 C20orf197Q8N268 126 aa7.25□□□□□ -1.25
SMG7-215ENST00000515829 UPK3BQ9BT76 320 aa7.24□□□□□ -1.25
SMG7-215ENST00000515829 USP17L23D6RBM5 183 aa7.24□□□□□ -1.25
SMG7-215ENST00000515829 ZZEF1O43149 2961 aa7.24□□□□□ -1.25
SMG7-215ENST00000515829 COX17Q14061 63 aa7.24□□□□□ -1.25
SMG7-215ENST00000515829 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
SMG7-215ENST00000515829 IGKV2-24A0A0C4DH68 120 aa7.24□□□□□ -1.25
SMG7-215ENST00000515829 COX7CP15954 63 aa7.23□□□□□ -1.25
SMG7-215ENST00000515829 FHL2Q14192 279 aa7.23□□□□□ -1.25
SMG7-215ENST00000515829 A0A087WZ39 114 aa7.23□□□□□ -1.25
SMG7-215ENST00000515829 HIGD2AQ9BW72 106 aa7.23□□□□□ -1.25
SMG7-215ENST00000515829 IGLV5-45A0A087WSX0 123 aa7.22□□□□□ -1.25
SMG7-215ENST00000515829 H0Y9J4 135 aa7.21□□□□□ -1.25
SMG7-215ENST00000515829 Q8IZM0 81 aa7.21□□□□□ -1.25
SMG7-215ENST00000515829 M0R378 163 aa7.21□□□□□ -1.26
SMG7-215ENST00000515829 FAM19A1Q7Z5A9 133 aa7.21□□□□□ -1.26
SMG7-215ENST00000515829 LAMA5O15230 3695 aa7.21□□□□□ -1.26
SMG7-215ENST00000515829 FAM110AQ9BQ89 295 aa7.21□□□□□ -1.26
SMG7-215ENST00000515829 LINC00846Q9NV44 126 aa7.21□□□□□ -1.26
SMG7-215ENST00000515829 KPRPQ5T749 579 aaPredicted RBP7.21□□□□□ -1.26
SMG7-215ENST00000515829 Q6ZQY7 126 aa7.21□□□□□ -1.26
SMG7-215ENST00000515829 DHRS4-AS1Q9P1J3 65 aa7.21□□□□□ -1.26
SMG7-215ENST00000515829 NDUFC2O95298 119 aa7.2□□□□□ -1.26
SMG7-215ENST00000515829 SERP2Q8N6R1 65 aa7.2□□□□□ -1.26
SMG7-215ENST00000515829 TRBV7-7A0A0K0K1E9 115 aa7.2□□□□□ -1.26
SMG7-215ENST00000515829 A8MTW9 85 aa7.19□□□□□ -1.26
SMG7-215ENST00000515829 UNQ6190/PRO20217Q6UXQ8 127 aa7.19□□□□□ -1.26
SMG7-215ENST00000515829 IGLV1-51P01701 117 aa7.19□□□□□ -1.26
SMG7-215ENST00000515829 NHLRC4P0CG21 123 aaPredicted RBP7.19□□□□□ -1.26
SMG7-215ENST00000515829 IGHV3OR16-9A0A0B4J2B5 98 aa7.18□□□□□ -1.26
SMG7-215ENST00000515829 SMR3AQ99954 134 aa7.18□□□□□ -1.26
SMG7-215ENST00000515829 Q6JHZ5 121 aa7.18□□□□□ -1.26
SMG7-215ENST00000515829 Q8N814 137 aa7.18□□□□□ -1.26
SMG7-215ENST00000515829 C16orf95Q9H693 158 aa7.17□□□□□ -1.26
SMG7-215ENST00000515829 LOC107984640A0A0U1RRK4 108 aa7.17□□□□□ -1.26
SMG7-215ENST00000515829 CCKP06307 115 aa7.17□□□□□ -1.26
SMG7-215ENST00000515829 C5orf47Q569G3 176 aa7.17□□□□□ -1.26
SMG7-215ENST00000515829 C6orf223Q8N319 242 aa7.17□□□□□ -1.26
SMG7-215ENST00000515829 ZNF706Q9Y5V0 76 aaPredicted RBP7.17□□□□□ -1.26
SMG7-215ENST00000515829 CYSRT1A8MQ03 144 aa7.16□□□□□ -1.26
SMG7-215ENST00000515829 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.16□□□□□ -1.26
SMG7-215ENST00000515829 FAM19A5Q7Z5A7 132 aaPredicted RBP7.16□□□□□ -1.26
SMG7-215ENST00000515829 SMCR5Q8TEV8 140 aa7.16□□□□□ -1.26
SMG7-215ENST00000515829 SNURFQ9Y675 71 aa7.15□□□□□ -1.26
SMG7-215ENST00000515829 COL12A1Q99715 3063 aa7.15□□□□□ -1.26
SMG7-215ENST00000515829 IGKV2-28A0A075B6P5 120 aa7.15□□□□□ -1.26
SMG7-215ENST00000515829 IGKV2D-28P01615 120 aa7.15□□□□□ -1.26
SMG7-215ENST00000515829 C7orf33Q8WU49 177 aa7.15□□□□□ -1.27
SMG7-215ENST00000515829 LINC00474Q9P2X8 69 aa7.14□□□□□ -1.27
SMG7-215ENST00000515829 IGHV4-30-4P0DP06 118 aa7.14□□□□□ -1.27
SMG7-215ENST00000515829 NDUFC1O43677 76 aa7.14□□□□□ -1.27
SMG7-215ENST00000515829 PPDPFQ9H3Y8 114 aa7.14□□□□□ -1.27
SMG7-215ENST00000515829 ZNF73O43830 326 aaPredicted RBP7.13□□□□□ -1.27
SMG7-215ENST00000515829 EGFEM1PQ0D2K5 195 aa7.13□□□□□ -1.27
SMG7-215ENST00000515829 ATP5EP56381 51 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms