RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 HIGD2BQ4VC39 106 aa6.67□□□□□ -1.34
NEDD9-214ENST00000513989 SFTA2Q6UW10 78 aa6.67□□□□□ -1.34
NEDD9-214ENST00000513989 NTN5Q8WTR8 489 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-214ENST00000513989 SMIM1B2RUZ4 78 aa6.66□□□□□ -1.34
NEDD9-214ENST00000513989 CXCL5P42830 114 aa6.66□□□□□ -1.34
NEDD9-214ENST00000513989 Q8IZM0 81 aa6.66□□□□□ -1.34
NEDD9-214ENST00000513989 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
NEDD9-214ENST00000513989 COX7B2Q8TF08 81 aa6.66□□□□□ -1.34
NEDD9-214ENST00000513989 PLEKHB2Q96CS7 222 aa6.66□□□□□ -1.34
NEDD9-214ENST00000513989 CAMK2N2Q96S95 79 aa6.66□□□□□ -1.34
NEDD9-214ENST00000513989 IGLV5-39A0A0G2JS06 123 aa6.65□□□□□ -1.34
NEDD9-214ENST00000513989 NDUFA1O15239 70 aa6.65□□□□□ -1.34
NEDD9-214ENST00000513989 PKIGQ9Y2B9 76 aa6.65□□□□□ -1.34
NEDD9-214ENST00000513989 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-214ENST00000513989 IGLV5-52A0A0A0MRZ9 124 aa6.64□□□□□ -1.35
NEDD9-214ENST00000513989 LEPROTO15243 131 aa6.64□□□□□ -1.35
NEDD9-214ENST00000513989 CNBPP62633 177 aaKnown RBP6.64□□□□□ -1.35
NEDD9-214ENST00000513989 SYCNQ0VAF6 134 aa6.64□□□□□ -1.35
NEDD9-214ENST00000513989 WFDC2Q14508 124 aa6.64□□□□□ -1.35
NEDD9-214ENST00000513989 JOSD1Q15040 202 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-214ENST00000513989 CDPF1Q6NVV7 123 aa6.64□□□□□ -1.35
NEDD9-214ENST00000513989 LINC00587B1AMM8 73 aa6.63□□□□□ -1.35
NEDD9-214ENST00000513989 E9PLD3 99 aa6.63□□□□□ -1.35
NEDD9-214ENST00000513989 LGALS3P17931 250 aaKnown RBP6.63□□□□□ -1.35
NEDD9-214ENST00000513989 KIAA0087Q14695 138 aa6.63□□□□□ -1.35
NEDD9-214ENST00000513989 ATOH7Q8N100 152 aa6.63□□□□□ -1.35
NEDD9-214ENST00000513989 STPG4Q8N801 248 aa6.63□□□□□ -1.35
NEDD9-214ENST00000513989 LINC00526Q96FQ7 95 aa6.63□□□□□ -1.35
NEDD9-214ENST00000513989 TRBV30A0A0K0K1B3 111 aa6.62□□□□□ -1.35
NEDD9-214ENST00000513989 MYMXA0A1B0GTQ4 84 aa6.62□□□□□ -1.35
NEDD9-214ENST00000513989 J3QQQ9 107 aa6.62□□□□□ -1.35
NEDD9-214ENST00000513989 NMUP48645 174 aa6.62□□□□□ -1.35
NEDD9-214ENST00000513989 RNF151Q2KHN1 245 aa6.62□□□□□ -1.35
NEDD9-214ENST00000513989 CARD19Q96LW7 228 aa6.62□□□□□ -1.35
NEDD9-214ENST00000513989 HERV-K104P63124 156 aa6.61□□□□□ -1.35
NEDD9-214ENST00000513989 UNQ6190/PRO20217Q6UXQ8 127 aa6.61□□□□□ -1.35
NEDD9-214ENST00000513989 NDUFA12Q9UI09 145 aa6.61□□□□□ -1.35
NEDD9-214ENST00000513989 SLPIP03973 132 aa6.6□□□□□ -1.35
NEDD9-214ENST00000513989 GCSHP23434 173 aa6.6□□□□□ -1.35
NEDD9-214ENST00000513989 C2orf82Q6UX34 121 aa6.6□□□□□ -1.35
NEDD9-214ENST00000513989 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
NEDD9-214ENST00000513989 C9orf163Q8N9P6 203 aa6.6□□□□□ -1.35
NEDD9-214ENST00000513989 S100A12P80511 92 aa6.59□□□□□ -1.35
NEDD9-214ENST00000513989 CIRBPQ14011 172 aaKnown RBP6.59□□□□□ -1.35
NEDD9-214ENST00000513989 Q6ZRU5 148 aa6.59□□□□□ -1.35
NEDD9-214ENST00000513989 DPH3Q96FX2 82 aa6.59□□□□□ -1.35
NEDD9-214ENST00000513989 VAMP8Q9BV40 100 aa6.59□□□□□ -1.35
NEDD9-214ENST00000513989 HERC1Q15751 4861 aa6.59□□□□□ -1.35
NEDD9-214ENST00000513989 LOC107984640A0A0U1RRK4 108 aa6.58□□□□□ -1.36
NEDD9-214ENST00000513989 C16orf90A8MZG2 172 aa6.58□□□□□ -1.36
NEDD9-214ENST00000513989 CDK2AP2O75956 126 aa6.58□□□□□ -1.36
NEDD9-214ENST00000513989 KRTAP10-2P60368 255 aa6.58□□□□□ -1.36
NEDD9-214ENST00000513989 COX17Q14061 63 aa6.58□□□□□ -1.36
NEDD9-214ENST00000513989 C10orf25Q5T742 122 aa6.58□□□□□ -1.36
NEDD9-214ENST00000513989 LCE2CQ5TA81 110 aa6.58□□□□□ -1.36
NEDD9-214ENST00000513989 LINC00474Q9P2X8 69 aa6.58□□□□□ -1.36
NEDD9-214ENST00000513989 PYY3Q5JQD4 70 aa6.57□□□□□ -1.36
NEDD9-214ENST00000513989 ZNF625Q96I27 306 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-214ENST00000513989 C6orf48Q9UBA6 75 aa6.57□□□□□ -1.36
NEDD9-214ENST00000513989 ZNF815PA8K554 130 aa6.56□□□□□ -1.36
NEDD9-214ENST00000513989 NDUFC2-KCTD14E9PQ53 114 aa6.56□□□□□ -1.36
NEDD9-214ENST00000513989 TLX1NBP0CAT3 122 aa6.56□□□□□ -1.36
NEDD9-214ENST00000513989 LINC00158P58513 81 aa6.56□□□□□ -1.36
NEDD9-214ENST00000513989 MAJINQ3KP22 176 aa6.56□□□□□ -1.36
NEDD9-214ENST00000513989 ANKRD39Q53RE8 183 aa6.56□□□□□ -1.36
NEDD9-214ENST00000513989 MEIG1Q5JSS6 88 aa6.56□□□□□ -1.36
NEDD9-214ENST00000513989 PFN2P35080 140 aa6.55□□□□□ -1.36
NEDD9-214ENST00000513989 RPL18AQ02543 176 aaKnown RBP6.55□□□□□ -1.36
NEDD9-214ENST00000513989 SPATA45Q537H7 98 aa6.55□□□□□ -1.36
NEDD9-214ENST00000513989 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
NEDD9-214ENST00000513989 SDIM1Q6ZPB5 146 aa6.55□□□□□ -1.36
NEDD9-214ENST00000513989 ERG28Q9UKR5 140 aa6.55□□□□□ -1.36
NEDD9-214ENST00000513989 PAM16Q9Y3D7 125 aa6.55□□□□□ -1.36
NEDD9-214ENST00000513989 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-214ENST00000513989 FAT1Q14517 4588 aa6.54□□□□□ -1.36
NEDD9-214ENST00000513989 IGKV2D-26A0A0A0MRZ7 120 aa6.54□□□□□ -1.36
NEDD9-214ENST00000513989 LOC105371267A0A1B0GV96 52 aa6.54□□□□□ -1.36
NEDD9-214ENST00000513989 FUSP35637 526 aaKnown RBP eCLIP6.54□□□□□ -1.361e-8■■■□□ 15.2
NEDD9-214ENST00000513989 TSPEAR-AS2P59090 65 aa6.54□□□□□ -1.36
NEDD9-214ENST00000513989 GAGE2BQ13066 116 aa6.54□□□□□ -1.36
NEDD9-214ENST00000513989 C9orf116Q5BN46 136 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-214ENST00000513989 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
NEDD9-214ENST00000513989 SMIM6P0DI80 62 aa6.53□□□□□ -1.36
NEDD9-214ENST00000513989 GAGE2EQ4V326 116 aa6.53□□□□□ -1.36
NEDD9-214ENST00000513989 GAGE2DQ9UEU5 116 aa6.53□□□□□ -1.36
NEDD9-214ENST00000513989 A0A0J9YXY3 114 aa6.52□□□□□ -1.37
NEDD9-214ENST00000513989 TIMM17BO60830 172 aa6.52□□□□□ -1.37
NEDD9-214ENST00000513989 SMIM13P0DJ93 91 aa6.52□□□□□ -1.37
NEDD9-214ENST00000513989 COX8AP10176 69 aa6.52□□□□□ -1.37
NEDD9-214ENST00000513989 PTTG1IPP53801 180 aa6.52□□□□□ -1.37
NEDD9-214ENST00000513989 LINC01620Q4KN68 170 aa6.52□□□□□ -1.37
NEDD9-214ENST00000513989 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
NEDD9-214ENST00000513989 Q8N1X5 172 aa6.52□□□□□ -1.37
NEDD9-214ENST00000513989 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
NEDD9-214ENST00000513989 SRRM2Q9UQ35 2752 aaKnown RBP6.52□□□□□ -1.37
NEDD9-214ENST00000513989 VPS13BQ7Z7G8 4022 aa6.52□□□□□ -1.37
NEDD9-214ENST00000513989 IGKV2-24A0A0C4DH68 120 aa6.51□□□□□ -1.37
NEDD9-214ENST00000513989 TMEM238C9JI98 176 aa6.51□□□□□ -1.37
NEDD9-214ENST00000513989 DLEU1O43261 78 aa6.51□□□□□ -1.37
NEDD9-214ENST00000513989 SLC25A34Q6PIV7 304 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms