RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 DCANP1Q8TF63 244 aa8.18□□□□□ -1.1
TCOF1-211ENST00000513346 AVPP01185 164 aa8.17□□□□□ -1.1
TCOF1-211ENST00000513346 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
TCOF1-211ENST00000513346 NHLRC4P0CG21 123 aaPredicted RBP8.17□□□□□ -1.1
TCOF1-211ENST00000513346 KIF25-AS1Q9Y6Z4 181 aa8.17□□□□□ -1.1
TCOF1-211ENST00000513346 MRPL55Q7Z7F7 128 aaKnown RBP8.16□□□□□ -1.1
TCOF1-211ENST00000513346 LINC00482Q8N8I6 264 aa8.16□□□□□ -1.1
TCOF1-211ENST00000513346 LINC00846Q9NV44 126 aa8.16□□□□□ -1.1
TCOF1-211ENST00000513346 PTPRBP23467 1997 aa8.16□□□□□ -1.1
TCOF1-211ENST00000513346 ETDCA0A1B0GVM5 59 aa8.15□□□□□ -1.1
TCOF1-211ENST00000513346 CHCHD7Q9BUK0 85 aa8.15□□□□□ -1.1
TCOF1-211ENST00000513346 AKAP13Q12802 2813 aa8.15□□□□□ -1.1
TCOF1-211ENST00000513346 BAHCC1Q9P281 2608 aa8.15□□□□□ -1.1
TCOF1-211ENST00000513346 A0A087WYN8 130 aa8.15□□□□□ -1.1
TCOF1-211ENST00000513346 MIFP14174 115 aa8.15□□□□□ -1.1
TCOF1-211ENST00000513346 MYO15AQ9UKN7 3530 aa8.15□□□□□ -1.11
TCOF1-211ENST00000513346 CDC42SE2Q9NRR3 84 aa8.15□□□□□ -1.11
TCOF1-211ENST00000513346 SPEGQ15772 3267 aa8.14□□□□□ -1.11
TCOF1-211ENST00000513346 LYRM9A8MSI8 78 aa8.14□□□□□ -1.11
TCOF1-211ENST00000513346 FAM19A3Q7Z5A8 133 aa8.14□□□□□ -1.11
TCOF1-211ENST00000513346 COX6A2Q02221 97 aa8.14□□□□□ -1.11
TCOF1-211ENST00000513346 PRO0628Q9UI54 55 aa8.14□□□□□ -1.11
TCOF1-211ENST00000513346 FLNAP21333 2647 aaKnown RBP8.14□□□□□ -1.11
TCOF1-211ENST00000513346 TRBV6-8A0A0A6YYG3 113 aa8.14□□□□□ -1.11
TCOF1-211ENST00000513346 IGLV1-40P01703 118 aa8.14□□□□□ -1.11
TCOF1-211ENST00000513346 Q6ZQY7 126 aa8.13□□□□□ -1.11
TCOF1-211ENST00000513346 C18orf65Q6ZTR6 163 aa8.13□□□□□ -1.11
TCOF1-211ENST00000513346 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.13□□□□□ -1.11
TCOF1-211ENST00000513346 FRYLO94915 3013 aa8.13□□□□□ -1.11
TCOF1-211ENST00000513346 TRBV6-4A0A1B0GX49 114 aa8.12□□□□□ -1.11
TCOF1-211ENST00000513346 RAI1Q7Z5J4 1906 aaPredicted RBP8.12□□□□□ -1.11
TCOF1-211ENST00000513346 NTM-AS1Q6ZSK4 140 aa8.12□□□□□ -1.11
TCOF1-211ENST00000513346 LINC00315P59091 139 aa8.12□□□□□ -1.11
TCOF1-211ENST00000513346 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
TCOF1-211ENST00000513346 SPTSSBQ8NFR3 76 aa8.12□□□□□ -1.11
TCOF1-211ENST00000513346 PRM2P04554 102 aa8.11□□□□□ -1.11
TCOF1-211ENST00000513346 FAM19A1Q7Z5A9 133 aa8.11□□□□□ -1.11
TCOF1-211ENST00000513346 TNRC18O15417 2968 aaPredicted RBP8.11□□□□□ -1.11
TCOF1-211ENST00000513346 DEFB131BA0A096LNP1 70 aa8.11□□□□□ -1.11
TCOF1-211ENST00000513346 LAMA1P25391 3075 aa8.11□□□□□ -1.11
TCOF1-211ENST00000513346 Q8N814 137 aa8.11□□□□□ -1.11
TCOF1-211ENST00000513346 C4orf26Q17RF5 130 aa8.1□□□□□ -1.11
TCOF1-211ENST00000513346 CHCHD10Q8WYQ3 142 aaPredicted RBP8.1□□□□□ -1.11
TCOF1-211ENST00000513346 KIR2DL5BQ8NHK3 375 aa8.1□□□□□ -1.11
TCOF1-211ENST00000513346 REV3LO60673 3130 aa8.09□□□□□ -1.11
TCOF1-211ENST00000513346 REG3AQ06141 175 aa8.09□□□□□ -1.11
TCOF1-211ENST00000513346 WFDC10AQ9H1F0 79 aa8.09□□□□□ -1.11
TCOF1-211ENST00000513346 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
TCOF1-211ENST00000513346 LINC00959A0A1B0GUT2 108 aa8.08□□□□□ -1.12
TCOF1-211ENST00000513346 STAB1Q9NY15 2570 aa8.08□□□□□ -1.12
TCOF1-211ENST00000513346 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
TCOF1-211ENST00000513346 Q8N2B8 174 aa8.07□□□□□ -1.12
TCOF1-211ENST00000513346 IGSF10Q6WRI0 2623 aa8.07□□□□□ -1.12
TCOF1-211ENST00000513346 Q8N3U1 123 aa8.07□□□□□ -1.12
TCOF1-211ENST00000513346 LINC00337Q8N6G1 96 aa8.07□□□□□ -1.12
TCOF1-211ENST00000513346 COX17Q14061 63 aa8.06□□□□□ -1.12
TCOF1-211ENST00000513346 Q8IZM0 81 aa8.06□□□□□ -1.12
TCOF1-211ENST00000513346 EDN2P20800 178 aa8.06□□□□□ -1.12
TCOF1-211ENST00000513346 SPTBN5Q9NRC6 3674 aaKnown RBP8.06□□□□□ -1.12
TCOF1-211ENST00000513346 IGLV5-39A0A0G2JS06 123 aa8.05□□□□□ -1.12
TCOF1-211ENST00000513346 TRBV7-6A0A0J9YX20 115 aa8.05□□□□□ -1.12
TCOF1-211ENST00000513346 UBE2AP49459 152 aa8.05□□□□□ -1.12
TCOF1-211ENST00000513346 CD164L2Q6UWJ8 174 aa8.05□□□□□ -1.12
TCOF1-211ENST00000513346 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.05□□□□□ -1.12
TCOF1-211ENST00000513346 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
TCOF1-211ENST00000513346 C3orf84H3BNL1 204 aa8.04□□□□□ -1.12
TCOF1-211ENST00000513346 FREM2Q5SZK8 3169 aa8.04□□□□□ -1.12
TCOF1-211ENST00000513346 A0A087WZ39 114 aa8.04□□□□□ -1.12
TCOF1-211ENST00000513346 LOC100131303A0A0U1RQF7 123 aa8.04□□□□□ -1.12
TCOF1-211ENST00000513346 IGKV2-24A0A0C4DH68 120 aa8.04□□□□□ -1.12
TCOF1-211ENST00000513346 NDUFS5O43920 106 aa8.04□□□□□ -1.12
TCOF1-211ENST00000513346 NDUFB1O75438 58 aa8.04□□□□□ -1.12
TCOF1-211ENST00000513346 OXLD1Q5BKU9 147 aa8.04□□□□□ -1.12
TCOF1-211ENST00000513346 PCSK5Q92824 1860 aa8.03□□□□□ -1.12
TCOF1-211ENST00000513346 Q6ZSN1 163 aa8.03□□□□□ -1.12
TCOF1-211ENST00000513346 PRYO14603 147 aa8.03□□□□□ -1.12
TCOF1-211ENST00000513346 C14orf177Q52M58 125 aa8.03□□□□□ -1.12
TCOF1-211ENST00000513346 BRI3O95415 125 aa8.02□□□□□ -1.12
TCOF1-211ENST00000513346 FAM19A4Q96LR4 140 aa8.02□□□□□ -1.12
TCOF1-211ENST00000513346 FAM218AQ96MZ4 157 aa8.02□□□□□ -1.12
TCOF1-211ENST00000513346 BCE1O60756 84 aa8.02□□□□□ -1.13
TCOF1-211ENST00000513346 GCN1Q92616 2671 aaKnown RBP8.02□□□□□ -1.13
TCOF1-211ENST00000513346 FRYQ5TBA9 3013 aa8.02□□□□□ -1.13
TCOF1-211ENST00000513346 Q6ZVQ6 151 aa8.02□□□□□ -1.13
TCOF1-211ENST00000513346 MUC7Q8TAX7 377 aa8.02□□□□□ -1.13
TCOF1-211ENST00000513346 TMEM254Q8TBM7 123 aa8.02□□□□□ -1.13
TCOF1-211ENST00000513346 C1orf158Q8N1D5 194 aa8.01□□□□□ -1.13
TCOF1-211ENST00000513346 TRAV10A0A0B4J240 114 aa8.01□□□□□ -1.13
TCOF1-211ENST00000513346 ODF3L2Q3SX64 289 aa8.01□□□□□ -1.13
TCOF1-211ENST00000513346 SMCR5Q8TEV8 140 aa8.01□□□□□ -1.13
TCOF1-211ENST00000513346 LITAFQ99732 161 aa8.01□□□□□ -1.13
TCOF1-211ENST00000513346 LINC01547P58512 204 aaPredicted RBP8.01□□□□□ -1.13
TCOF1-211ENST00000513346 PRR3P79522 188 aaKnown RBP8.01□□□□□ -1.13
TCOF1-211ENST00000513346 BEAN1Q3B7T3 259 aa8.01□□□□□ -1.13
TCOF1-211ENST00000513346 PRR4Q16378 134 aa8.01□□□□□ -1.13
TCOF1-211ENST00000513346 ZNF73O43830 326 aaPredicted RBP8□□□□□ -1.13
TCOF1-211ENST00000513346 IGLV5-45A0A087WSX0 123 aa7.99□□□□□ -1.13
TCOF1-211ENST00000513346 C16orf95Q9H693 158 aa7.99□□□□□ -1.13
TCOF1-211ENST00000513346 LRCOL1A6NCL2 159 aa7.99□□□□□ -1.13
TCOF1-211ENST00000513346 KPRPQ5T749 579 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms